KCC001692A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001692A_C01 KCC001692A_c01
gcacgaggaacaaggtgcagctGGACATCCGCACTGGCCACGCGCAGACGGTGGACAAGG
TGCTGCGCTGGGTGGACGAGGAGGGCAGCGTGCAGGGCATCACCGTGGCGGACTGCGGCT
GCGGGACAGGCAGCCTGGCCATCCCGCTGGCGCTGCGCGGCGCCGCCGTCAGCGCCTCCG
ACATCTCCGCCGCCATGGCGTCTGAGGCGGAGCAGCGCTACCAGCAGGCGGTGGCGGCCG
GGCAGGGCAAGGCGCCCAAGGTGGCGCCCAAGTTCGAGGCGCTGGACCTGGAGTCCGTCA
AGGGCAAGTACGACACGGTCACTTGCCTGGACGTGATGATTCACTACCCCCAGGACAAGG
TGGACGCCATGATCACGCACCTGGCGGGTCTGTCCGACCGCCGCCTCATCATCTCGTTCG
CACCCAAGACGCTGTCGTACAGCATCCTCAAGCGCATTGGCGAGCTGTTCCCCGGCCCCA
GCAAGGCCACCCGCGCCTACCTGCACCGTGAGGAGGACGTGGAGGCTGCCCTCAAGCGCG
CCGGCTTCAAGGTCACCAAGCGTGAGATGAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001692A_C01 KCC001692A_c01
         (571 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF70243.1|AF213968_1 S-adenosyl-L-methionine Mg-protoporphyr...   243  1e-63
ref|NP_194238.1| magnesium-protoporphyrin O-methyltransferase (m...   224  5e-58
dbj|BAA84812.1| Similar to magnesium-protoporphyrin IX methyltra...   209  2e-53
ref|NP_487241.1| Mg-protoporphyrin IX methyl transferase [Nostoc...   201  8e-51
ref|ZP_00112151.1| COG2227: 2-polyprenyl-3-methyl-5-hydroxy-6-me...   200  1e-50

>gb|AAF70243.1|AF213968_1 S-adenosyl-L-methionine Mg-protoporphyrin IX methyltranserase
           [Nicotiana tabacum]
          Length = 325

 Score =  243 bits (621), Expect = 1e-63
 Identities = 123/188 (65%), Positives = 148/188 (78%), Gaps = 3/188 (1%)
 Frame = +3

Query: 9   NKVQLDIRTGHAQTVDKVLRWVDEEGSVQGITVADCGCGTGSLAIPLALRGAAVSASDIS 188
           NKVQLDIR GH++TV+ V++ + EEGS+QG+TV D GCGTG L+IPLA  GA VSASDIS
Sbjct: 121 NKVQLDIRLGHSKTVENVMKMLTEEGSLQGVTVCDAGCGTGCLSIPLAKEGAVVSASDIS 180

Query: 189 AAMASEAEQRYQQAVAAG---QGKAPKVAPKFEALDLESVKGKYDTVTCLDVMIHYPQDK 359
           A+M +EA+++ Q+ +      Q  AP V PKFE  DLES+ GKYDTV CLDVMIHYPQ K
Sbjct: 181 ASMVAEAQKQAQEELFKDKDDQSPAP-VMPKFEVKDLESLDGKYDTVVCLDVMIHYPQSK 239

Query: 360 VDAMITHLAGLSDRRLIISFAPKTLSYSILKRIGELFPGPSKATRAYLHREEDVEAALKR 539
            D MI HLA L++ RLI+SFAPKT  Y +LKRIGELFPGPSKATRAYLH E DVE AL++
Sbjct: 240 ADGMIAHLASLAENRLILSFAPKTFYYDLLKRIGELFPGPSKATRAYLHAEADVERALQK 299

Query: 540 AGFKVTKR 563
           AG+K+ KR
Sbjct: 300 AGWKIRKR 307

>ref|NP_194238.1| magnesium-protoporphyrin O-methyltransferase
           (magnesium-protoporphyrin IX methyltransferase)
           [Arabidopsis thaliana] gi|30686748|ref|NP_849438.1|
           magnesium-protoporphyrin O-methyltransferase
           (magnesium-protoporphyrin IX methyltransferase)
           [Arabidopsis thaliana] gi|30686750|ref|NP_849439.1|
           magnesium-protoporphyrin O-methyltransferase
           (magnesium-protoporphyrin IX methyltransferase)
           [Arabidopsis thaliana] gi|7487951|pir||T05529
           magnesium-protoporphyrin IX methyltransferase (EC
           2.1.1.-) - Arabidopsis thaliana
           gi|4455251|emb|CAB36750.1| magnesium-protoporphyrin IX
           methyltransferase-like protein [Arabidopsis thaliana]
           gi|7269358|emb|CAB79417.1| magnesium-protoporphyrin IX
           methyltransferase-like protein [Arabidopsis thaliana]
           gi|14334514|gb|AAK59454.1| putative
           magnesium-protoporphyrin IX methyltransferase
           [Arabidopsis thaliana] gi|17104553|gb|AAL34165.1|
           putative magnesium-protoporphyrin IX methyltransferase
           [Arabidopsis thaliana]
          Length = 312

 Score =  224 bits (572), Expect = 5e-58
 Identities = 113/185 (61%), Positives = 139/185 (75%)
 Frame = +3

Query: 9   NKVQLDIRTGHAQTVDKVLRWVDEEGSVQGITVADCGCGTGSLAIPLALRGAAVSASDIS 188
           N+VQ DIR GHA+TV+  +  + E+ S+ G+TV D GCGTG L+IPLA  GA VSASDIS
Sbjct: 116 NRVQKDIRLGHAKTVENTMLMLTEDRSLAGVTVCDAGCGTGLLSIPLAKEGAIVSASDIS 175

Query: 189 AAMASEAEQRYQQAVAAGQGKAPKVAPKFEALDLESVKGKYDTVTCLDVMIHYPQDKVDA 368
           AAM +EAE + +  + +         PKFE  DLES+ GKYDTV CLDV+IHYPQ+K D 
Sbjct: 176 AAMVAEAEMKAKAQLPSEN------LPKFEVNDLESLTGKYDTVVCLDVLIHYPQNKADG 229

Query: 369 MITHLAGLSDRRLIISFAPKTLSYSILKRIGELFPGPSKATRAYLHREEDVEAALKRAGF 548
           MI HLA L+++R+I+SFAPKT  Y ILKRIGELFPGPSKATRAYLH E DVE AL + G+
Sbjct: 230 MIAHLASLAEKRVILSFAPKTFYYDILKRIGELFPGPSKATRAYLHSEADVERALGKVGW 289

Query: 549 KVTKR 563
           K++KR
Sbjct: 290 KISKR 294

>dbj|BAA84812.1| Similar to magnesium-protoporphyrin IX methyltransferase (AL035523)
           [Oryza sativa (japonica cultivar-group)]
           gi|11875161|dbj|BAB19374.1| putative
           magnesium-protoporphyrin IX methyltransferase [Oryza
           sativa (japonica cultivar-group)]
           gi|28190668|gb|AAO33146.1| putative
           magnesium-protoporphyrin IX methyltransferase [Oryza
           sativa (japonica cultivar-group)]
          Length = 326

 Score =  209 bits (532), Expect = 2e-53
 Identities = 108/186 (58%), Positives = 137/186 (73%), Gaps = 1/186 (0%)
 Frame = +3

Query: 9   NKVQLDIRTGHAQTVDKVLRWV-DEEGSVQGITVADCGCGTGSLAIPLALRGAAVSASDI 185
           N+VQLDIR GHA+TV   L  + D    + G TV D GCGTGSLAIPLA +GA+V ASDI
Sbjct: 120 NRVQLDIREGHARTVAATLSMLRDSPVPLAGATVCDAGCGTGSLAIPLASQGASVLASDI 179

Query: 186 SAAMASEAEQRYQQAVAAGQGKAPKVAPKFEALDLESVKGKYDTVTCLDVMIHYPQDKVD 365
           SAAM SEA+++ + A  A         P+FE  DLES++GKYD V CLDV+IHYP+++  
Sbjct: 180 SAAMVSEAQRQAEAAAMAASDTFRM--PRFEVRDLESLEGKYDIVVCLDVLIHYPREEAK 237

Query: 366 AMITHLAGLSDRRLIISFAPKTLSYSILKRIGELFPGPSKATRAYLHREEDVEAALKRAG 545
            MI HLA L+++R++ISFAP+TL +  LKR+GELFPGPSKATRAYLH E D+E AL+ AG
Sbjct: 238 QMIRHLASLAEKRVLISFAPRTLYFDFLKRVGELFPGPSKATRAYLHSERDIEDALRDAG 297

Query: 546 FKVTKR 563
           ++V  R
Sbjct: 298 WRVANR 303

>ref|NP_487241.1| Mg-protoporphyrin IX methyl transferase [Nostoc sp. PCC 7120]
           gi|25354939|pir||AB2206 Mg-protoporphyrin IX methyl
           transferase [imported] - Nostoc sp. (strain PCC 7120)
           gi|17132296|dbj|BAB74900.1| Mg-protoporphyrin IX methyl
           transferase [Nostoc sp. PCC 7120]
          Length = 228

 Score =  201 bits (510), Expect = 8e-51
 Identities = 98/186 (52%), Positives = 126/186 (67%)
 Frame = +3

Query: 9   NKVQLDIRTGHAQTVDKVLRWVDEEGSVQGITVADCGCGTGSLAIPLALRGAAVSASDIS 188
           NKVQLDIR GH QTVD V+ W+  +G++  +++ D GCG GSL+IPLA  GA V ASDIS
Sbjct: 32  NKVQLDIRNGHQQTVDSVIGWLKNDGNLAELSICDAGCGVGSLSIPLATEGAKVYASDIS 91

Query: 189 AAMASEAEQRYQQAVAAGQGKAPKVAPKFEALDLESVKGKYDTVTCLDVMIHYPQDKVDA 368
             M  E +QR  + +   +       P F   DLES+ G Y TV CLDV+IHYPQ+K D 
Sbjct: 92  EKMVEEGKQRALETLGNAEN------PTFAVQDLESLSGSYHTVICLDVLIHYPQEKADE 145

Query: 369 MITHLAGLSDRRLIISFAPKTLSYSILKRIGELFPGPSKATRAYLHREEDVEAALKRAGF 548
           MI+HL  L+  R+I+SFAPKT + ++LK+IG  FPGPSK TRAYLHRE DV   L+  GF
Sbjct: 146 MISHLCSLAQSRIILSFAPKTCALTLLKKIGSFFPGPSKTTRAYLHREADVIKILESNGF 205

Query: 549 KVTKRE 566
            + ++E
Sbjct: 206 AIQRKE 211

>ref|ZP_00112151.1| COG2227: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol
           methylase [Nostoc punctiforme]
          Length = 228

 Score =  200 bits (509), Expect = 1e-50
 Identities = 100/187 (53%), Positives = 127/187 (67%)
 Frame = +3

Query: 9   NKVQLDIRTGHAQTVDKVLRWVDEEGSVQGITVADCGCGTGSLAIPLALRGAAVSASDIS 188
           NKVQLDIR GH QTVD VL W+  + ++  +++ D GCG GSL+IPLA+ GA V A+DIS
Sbjct: 32  NKVQLDIRNGHQQTVDTVLGWLKADNNLPELSICDAGCGVGSLSIPLAVDGAKVYATDIS 91

Query: 189 AAMASEAEQRYQQAVAAGQGKAPKVAPKFEALDLESVKGKYDTVTCLDVMIHYPQDKVDA 368
             M  E + R +Q +   +       P F   DLES+ G Y TV CLDV+IHYPQ+K D 
Sbjct: 92  EKMVEEGKDRAKQTLGNDEN------PTFAVQDLESLSGSYHTVICLDVLIHYPQEKADE 145

Query: 369 MITHLAGLSDRRLIISFAPKTLSYSILKRIGELFPGPSKATRAYLHREEDVEAALKRAGF 548
           MI+HL  L+  R+I+SFAPKT + SILK+IG  FPGPSKATRAYLHRE DV   L+  GF
Sbjct: 146 MISHLCSLAQSRIILSFAPKTCALSILKKIGSFFPGPSKATRAYLHREADVVRILESNGF 205

Query: 549 KVTKREM 569
            + ++ M
Sbjct: 206 SLQRKAM 212



EST assemble image


clone accession position
1 CM082a05_r AV392132 1 560
2 LC041d04_r AV621819 23 571




Chlamydomonas reinhardtii
Kazusa DNA Research Institute