KCC001685A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001685A_C01 KCC001685A_c01
GCACCATCCTCCTTACAACCAAAGCATCGCATGCGCACGTGCCGTTACCGCCTCATGTTC
CGTCCACTCAACCACTTAAGCGCCGAGGATAGGGGACTCCTTTATGTTGTGTTGTTAAGC
TGCAAACTCCTCTACACACTACTCGAATACATCGACAAACTTTGCGCCCGACACGATACC
ATCATTCATAATTCAGTAGACAAAAGAATACTTGTAGATGCACACAGCCGCCACCCTCTT
TAGGGCAGCAGCAGTCAAGCTCTGGGGCTCAAGGCGCAAGCGTCAGTGATGCTGGTCTTG
AGTCCACCTCCCTGCCTCCCGTCGCCGGCACACGCCGAGCCGCCGGGGCGCACACACGCT
CCCGCGCACACTGTAGGTCCGTCGAGGTTATCACACCTAAGCTGTCGGCTTGGCCGAACC
CCTCCCTACCCCCCCCCATAGTAAATAGCGCGAACACGCGTGCAGACGCTACGCCCGCCC
GCAGTTCGCACCGGCTCTCCCTGCACTCGCAGnCGGCTCCTACTCATGCCCCTGCTCCAC
GCCCAGGGCCATGAnCTGCGGCCGTTCATGGCGGCAGCGGCGCTACTTCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001685A_C01 KCC001685A_c01
         (590 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_012284.1| Required for invasion and pseudohyphae formatio...    42  0.005
dbj|BAA95860.1| unnamed protein product [Oryza sativa (japonica ...    41  0.011
dbj|BAB93428.1| P0028G04.4 [Oryza sativa (japonica cultivar-group)]    41  0.011
gb|AAB92649.1| replicase protein [Turnip yellow mosaic virus]          33  0.020
dbj|BAC38099.1| unnamed protein product [Mus musculus]                 40  0.024

>ref|NP_012284.1| Required for invasion and pseudohyphae formation in response to
           nitrogen starvation; Muc1p [Saccharomyces cerevisiae]
           gi|728850|sp|P08640|AMYH_YEAST Glucoamylase S1/S2
           precursor (Glucan 1,4-alpha-glucosidase)
           (1,4-alpha-D-glucan glucohydrolase)
           gi|626156|pir||S48478 glucan 1,4-alpha-glucosidase (EC
           3.2.1.3) - yeast  (Saccharomyces cerevisiae)
           gi|557822|emb|CAA86176.1| mal5 [Saccharomyces
           cerevisiae] gi|1304387|gb|AAC49609.1| glucoamylase
           [Saccharomyces cerevisiae var. diastaticus]
          Length = 1367

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
 Frame = +3

Query: 228 PPPSLGQQQSSSGAQGASVSDAGLESTSLPPVAGTRRAAGAHTRSRAHCRSVEVITPKLS 407
           P PS    +SSS    +S +++       P  + T  ++   T S     S  V TP  S
Sbjct: 528 PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSS 587

Query: 408 AWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAP--------THAPAPRP 545
              + S P P  +S+ T + + PA +    +  S  AP        + AP P P
Sbjct: 588 TTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTP 641

 Score = 42.0 bits (97), Expect = 0.006
 Identities = 28/103 (27%), Positives = 43/103 (41%)
 Frame = +3

Query: 228 PPPSLGQQQSSSGAQGASVSDAGLESTSLPPVAGTRRAAGAHTRSRAHCRSVEVITPKLS 407
           P PS    +SSS    +S +++       P  + T  ++   T S     S  V TP  S
Sbjct: 459 PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSS 518

Query: 408 AWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAPTHAPA 536
              + S P P  +S+ T + + P  SS   +  S  AP   P+
Sbjct: 519 TTESSSAPAPTPSSSTTESSSAPVTSS---TTESSSAPVPTPS 558

 Score = 41.6 bits (96), Expect = 0.008
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
 Frame = +3

Query: 228 PPPSLGQQQSSSGAQGASVSDAGLESTSLPPVAGTRRAAGAH-TRSRAHCRSVEVITPKL 404
           P PS    +SSS A   + S +  ES+S P  + T  ++ A  T S     S  V TP  
Sbjct: 654 PTPSSSTTESSS-APVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSS 712

Query: 405 SAWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAP--------THAPAPRP 545
           S   + S P P  +S+ T + + P  +    +  S  AP        + AP P P
Sbjct: 713 STTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTP 767

 Score = 39.7 bits (91), Expect = 0.032
 Identities = 35/118 (29%), Positives = 50/118 (41%), Gaps = 12/118 (10%)
 Frame = +3

Query: 228 PPPSLGQQQSSSGAQGASVSDAGLESTSLPPVAGTRRAAGAH----TRSRAHCRSVEVIT 395
           P PS    +SSS A   + S +  ES+S P  + T  ++ A     + S     S  V T
Sbjct: 597 PTPSSSTTESSS-APAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPT 655

Query: 396 PKLSAWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAP--------THAPAPRP 545
           P  S   + S P P  +S+ T + + P  SS   +  S  AP        + AP P P
Sbjct: 656 PSSSTTESSSAPVPTPSSSTTESSSAPVTSS---TTESSSAPVTSSTTESSSAPVPTP 710

 Score = 39.3 bits (90), Expect = 0.041
 Identities = 46/178 (25%), Positives = 68/178 (37%), Gaps = 4/178 (2%)
 Frame = +3

Query: 15   TTKASHAHVPLPPHVPSTQPLKRRG*GTPLCCVVKLQTPLHTTRIHRQTLRPTRYHHS*F 194
            TT++S A VP P    ST         TP     +  +   T+     +  P        
Sbjct: 645  TTESSSAPVPTPSS--STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVT------ 696

Query: 195  SRQKNTCRCTQPPPSLGQQQSSSGAQGASVSDAGLESTSLP---PVAGTRRAAGAH-TRS 362
            S    +     P PS    +SSS A   + S +  ES+S P   P + T  ++ A  T S
Sbjct: 697  SSTTESSSAPVPTPSSSTTESSS-APVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSS 755

Query: 363  RAHCRSVEVITPKLSAWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAPTHAPA 536
                 S  V TP  S   + S P P  +S+ T + + P  +    +  S  AP   P+
Sbjct: 756  TTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPS 813

 Score = 38.5 bits (88), Expect = 0.070
 Identities = 46/181 (25%), Positives = 66/181 (36%), Gaps = 12/181 (6%)
 Frame = +3

Query: 15  TTKASHAHVPLPPHVPSTQPLKRRG*GTPLCCVVKLQTPLHTTRIHRQTLRPTRYHHS*F 194
           TT +     P PPH  +T P  ++   T   C  K  TP+ T                  
Sbjct: 276 TTTSCTKEKPTPPHHDTT-PCTKKKTTTSKTCTKKTTTPVPTPS---------------- 318

Query: 195 SRQKNTCRCTQPPPSLGQQQSSSGAQGASVSDAG-----------LESTSLPPVAGTRRA 341
           S    +     P PS    +SSS    +S +++             ES+S P  + T  +
Sbjct: 319 SSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTES 378

Query: 342 AGAH-TRSRAHCRSVEVITPKLSAWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXA 518
           + A  T S     S  V TP  S   + S P   V S+ T + + P  SS   +  S  A
Sbjct: 379 SSAPVTSSTTESSSAPVPTPSSSTTESSSAP---VTSSTTESSSAPVTSS---TTESSSA 432

Query: 519 P 521
           P
Sbjct: 433 P 433

 Score = 37.4 bits (85), Expect = 0.16
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
 Frame = +3

Query: 228  PPPSLGQQQSSSGAQGASVSDAGLESTSLPPVAGTRRAAGAH----TRSRAHCRSVEVIT 395
            P PS    +SSS A   + S +  ES+S P  + T  ++ A     + S     S  V T
Sbjct: 723  PTPSSSTTESSS-APVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPT 781

Query: 396  PKLSAWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAPTHAP 533
            P  S   + S P P  +S+ T +   P  +    S  +  AP+  P
Sbjct: 782  PSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTP 827

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 31/102 (30%), Positives = 45/102 (43%), Gaps = 4/102 (3%)
 Frame = +3

Query: 228 PPPSLGQQQSSSGAQGASVSDAGLESTSLP---PVAGTRRAAGAH-TRSRAHCRSVEVIT 395
           P PS    +SSS A   + S +  ES+S P   P + T  ++ A  T S     S  V T
Sbjct: 582 PTPSSSTTESSS-APVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPT 640

Query: 396 PKLSAWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAP 521
           P  S   + S P P  +S+ T + + P  +    +  S  AP
Sbjct: 641 PSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAP 682

 Score = 32.7 bits (73), Expect = 3.9
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
 Frame = +3

Query: 228  PPPSLGQQQSSSGAQGASVSDAGLESTSLP---PVAGTRRAAGAH----TRSRAHCRSVE 386
            P PS    +SSS    A V+ +  ES+S P   P + T  ++ A     + S     S  
Sbjct: 738  PTPSSSTTESSS----APVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAP 793

Query: 387  VITPKLSAWPNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAPTHAPA 536
            V TP  S   +   P P  +S++    + P+ +    S  S   P   P+
Sbjct: 794  VPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFSSSTESSSVPVPTPS 843

>dbj|BAA95860.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
           gi|8467942|dbj|BAA96566.1| unnamed protein product
           [Oryza sativa (japonica cultivar-group)]
          Length = 187

 Score = 41.2 bits (95), Expect = 0.011
 Identities = 35/124 (28%), Positives = 47/124 (37%), Gaps = 13/124 (10%)
 Frame = +3

Query: 219 CTQPPPSLGQQQSSSGAQGASVSDAGLESTSLPPVAGTRRAAGAHTRSRAHCRSVEVITP 398
           C + PP      SS  A+G  VS +      +    G R A   H R R    S  V   
Sbjct: 60  CRRDPPGAPTLTSSFPARGRPVSSSPARGLPVSSFPGARTAGELHPRVRTLASSPVVRGW 119

Query: 399 KLSAWP-----------NPSLPPPIVNSANTRADATPARSSHRLSLHS--QXAPTHAPAP 539
             S+ P           +P+  PP  +    RA      +   LSLH+  +  P HAP+P
Sbjct: 120 LASSTPAHGVRGWHASFSPARGPPESSRDGRRAPPPRTDAGELLSLHTDGRRTPLHAPSP 179

Query: 540 RPGP 551
            P P
Sbjct: 180 SPPP 183

>dbj|BAB93428.1| P0028G04.4 [Oryza sativa (japonica cultivar-group)]
          Length = 224

 Score = 41.2 bits (95), Expect = 0.011
 Identities = 28/85 (32%), Positives = 35/85 (40%), Gaps = 4/85 (4%)
 Frame = +3

Query: 309 SLPPVAGTRRAAGAHTRSRAHCRSVEVITPKLSAWPNPSLPPPIVNSANTRADATPARSS 488
           SLPP + +  +    T     CR V     +L A P P+ PPP +  +   A  T    S
Sbjct: 81  SLPPSSVSTSSTAVSTTGHIRCRRVH---HRLGAQPQPARPPPSLTKSGVAASTTAFVPS 137

Query: 489 ----HRLSLHSQXAPTHAPAPRPGP 551
               HRL      AP H P P P P
Sbjct: 138 YNRCHRLRPRPHPAPPHPPPP-PSP 161

 Score = 26.6 bits (57), Expect(2) = 6.1
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 414 PNPSLPPPIVNSANTRADATPARSSH--RLSLHSQ 512
           P P+ PPP    ++  A +T + +SH  R  LHS+
Sbjct: 187 PQPAAPPPSPTKSDAAASSTASVTSHIRRHCLHSR 221

 Score = 24.3 bits (51), Expect(2) = 6.1
 Identities = 13/45 (28%), Positives = 17/45 (36%)
 Frame = +1

Query: 304 PPPCLPSPAHAEPPGRTHAPAHTVGPSRLSHLSCRLGRTPPYPPP 438
           P P  P P+  +        A     +R   L  R    PP+PPP
Sbjct: 113 PQPARPPPSLTKSGVAASTTAFVPSYNRCHRLRPRPHPAPPHPPP 157

>gb|AAB92649.1| replicase protein [Turnip yellow mosaic virus]
          Length = 1844

 Score = 33.1 bits (74), Expect(2) = 0.020
 Identities = 19/48 (39%), Positives = 25/48 (51%), Gaps = 3/48 (6%)
 Frame = +1

Query: 304 PPPCLPSPAHAEPPGRTHAPAHTVGPSRLSHLSCRL---GRTPPYPPP 438
           PPP   SP  A+PP  T AP   + P++ +H +  L     TP  PPP
Sbjct: 604 PPPVASSPG-AQPPTTTAAPPTPIEPTQRAHQNSDLTLESSTPIEPPP 650

 Score = 26.2 bits (56), Expect(2) = 0.020
 Identities = 15/42 (35%), Positives = 19/42 (44%)
 Frame = +3

Query: 414 PNPSLPPPIVNSANTRADATPARSSHRLSLHSQXAPTHAPAP 539
           P  + PPP  +  ++   A P   SH L  HS  AP   P P
Sbjct: 687 PTRTSPPPSTSHQDSTDPADPLMGSHLLH-HSLPAPPTHPLP 727

>dbj|BAC38099.1| unnamed protein product [Mus musculus]
          Length = 123

 Score = 40.0 bits (92), Expect = 0.024
 Identities = 35/95 (36%), Positives = 42/95 (43%), Gaps = 2/95 (2%)
 Frame = +1

Query: 259 ALGLKAQASVMLVLSPPPCL--PSPAHAEPPGRTHAPAHTVGPSRLSHLSCRLGRTPPYP 432
           A G++A AS  L   PP     P+P    PP RT APA T  P        R  R PP P
Sbjct: 1   ASGVRAPASRAL---PPAAAARPAPPRPAPPARTAAPAGT-RPGVCGTRGLRARRHPPAP 56

Query: 433 PP**IARTRVQTLRPPAVRTGSPCTRXRLLLMPLL 537
           P    + T++  L+ P  R   P    R  L PLL
Sbjct: 57  P----SHTQIPLLKKPK-RCSPPTPSERCRLRPLL 86



EST assemble image


clone accession position
1 HCL007g05_r AV639948 1 284
2 CM080c01_r AV392041 2 590
3 MX230g10_r BP090905 3 408




Chlamydomonas reinhardtii
Kazusa DNA Research Institute