Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001674A_C01 KCC001674A_c01
(559 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_850764.1| KH domain protein Nova, putative [Arabidopsis t... 93 3e-18
ref|NP_196063.1| KH domain protein Nova, putative [Arabidopsis t... 93 3e-18
ref|XP_312014.1| ENSANGP00000018709 [Anopheles gambiae] gi|21295... 77 2e-13
sp|Q80WA4|NOA1_RAT RNA-binding protein Nova-1 (Neuro-oncological... 75 5e-13
ref|XP_214825.2| similar to astrocytic NOVA-like RNA-binding pro... 74 1e-12
>ref|NP_850764.1| KH domain protein Nova, putative [Arabidopsis thaliana]
Length = 334
Score = 92.8 bits (229), Expect = 3e-18
Identities = 49/122 (40%), Positives = 75/122 (61%)
Frame = +3
Query: 177 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 356
+ LVSN+ AGSVIGK G+ I + Q SGAR+QLSR EF+PGT+DR++++SGS+ V+
Sbjct: 38 RFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNG 97
Query: 357 IFLILEKISRDVSAGAGANGAKRGVPVKKPEDAGQAQVKLALSRRLCGLLIGHKGQTVRD 536
+ LIL+K+ ++ A G E + +++L + CG +IG G T++
Sbjct: 98 LELILDKLHSELHAEDG------------NEVEPRRRIRLVVPNSSCGGIIGKGGATIKS 145
Query: 537 FI 542
FI
Sbjct: 146 FI 147
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/71 (39%), Positives = 42/71 (58%)
Frame = +3
Query: 177 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 356
+L+V NS G +IGK GA I+ S A +++S + G SDR++ LSG+ + A
Sbjct: 124 RLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA 183
Query: 357 IFLILEKISRD 389
I LIL K++ D
Sbjct: 184 IDLILAKLTED 194
Score = 49.3 bits (116), Expect = 3e-05
Identities = 29/92 (31%), Positives = 50/92 (53%)
Frame = +3
Query: 105 VNSAVAGSGSGSGDLPTGTQQVVAKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRA 284
VN A GSG G + V++ G V+G+ G NI ++ + +GAR+++S
Sbjct: 235 VNYAPNGSG-GKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDR 293
Query: 285 GEFYPGTSDRVLLLSGSLHAVLTAIFLILEKI 380
G+F GT+DR + ++G A+ A +I +K+
Sbjct: 294 GDFMSGTTDRKVSITGPQRAIQQAETMIKQKV 325
>ref|NP_196063.1| KH domain protein Nova, putative [Arabidopsis thaliana]
gi|11358673|pir||T48439 probable RNA-binding protein -
Arabidopsis thaliana gi|7406447|emb|CAB85549.1| putative
RNA-binding protein [Arabidopsis thaliana]
gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30
[Arabidopsis thaliana] gi|21554568|gb|AAM63617.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|23507775|gb|AAN38691.1| At5g04430/T32M21_30
[Arabidopsis thaliana]
Length = 313
Score = 92.8 bits (229), Expect = 3e-18
Identities = 49/122 (40%), Positives = 75/122 (61%)
Frame = +3
Query: 177 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 356
+ LVSN+ AGSVIGK G+ I + Q SGAR+QLSR EF+PGT+DR++++SGS+ V+
Sbjct: 38 RFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNG 97
Query: 357 IFLILEKISRDVSAGAGANGAKRGVPVKKPEDAGQAQVKLALSRRLCGLLIGHKGQTVRD 536
+ LIL+K+ ++ A G E + +++L + CG +IG G T++
Sbjct: 98 LELILDKLHSELHAEDG------------NEVEPRRRIRLVVPNSSCGGIIGKGGATIKS 145
Query: 537 FI 542
FI
Sbjct: 146 FI 147
Score = 55.8 bits (133), Expect = 4e-07
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Frame = +3
Query: 177 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 356
+L+V NS G +IGK GA I+ S A +++S + G SDR++ LSG+ + A
Sbjct: 124 RLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA 183
Query: 357 IFLILEKISRD----------VSAGAGANGAK-----RGVPVKKPEDAGQAQVKLALSRR 491
I LIL K++ D S AG N G + ++ V + ++
Sbjct: 184 IDLILAKLTEDDHYSQNVHSPYSYAAGYNSVNYAPNGSGGKYQNHKEEASTTVTIGVADE 243
Query: 492 LCGLLIGHKGQTVRD 536
GL++G G+ + +
Sbjct: 244 HIGLVLGRGGRNIME 258
Score = 49.3 bits (116), Expect = 3e-05
Identities = 29/92 (31%), Positives = 50/92 (53%)
Frame = +3
Query: 105 VNSAVAGSGSGSGDLPTGTQQVVAKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRA 284
VN A GSG G + V++ G V+G+ G NI ++ + +GAR+++S
Sbjct: 214 VNYAPNGSG-GKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDR 272
Query: 285 GEFYPGTSDRVLLLSGSLHAVLTAIFLILEKI 380
G+F GT+DR + ++G A+ A +I +K+
Sbjct: 273 GDFMSGTTDRKVSITGPQRAIQQAETMIKQKV 304
>ref|XP_312014.1| ENSANGP00000018709 [Anopheles gambiae] gi|21295883|gb|EAA08028.1|
ENSANGP00000018709 [Anopheles gambiae str. PEST]
Length = 532
Score = 76.6 bits (187), Expect = 2e-13
Identities = 43/128 (33%), Positives = 71/128 (54%), Gaps = 2/128 (1%)
Frame = +3
Query: 177 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 356
K LV + AG++IGK G I LQ+ +GARV++S+A +FYPGT++R+ L+SG++ +L
Sbjct: 22 KTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTTERICLISGTVEGILAV 81
Query: 357 IFLILEKISR--DVSAGAGANGAKRGVPVKKPEDAGQAQVKLALSRRLCGLLIGHKGQTV 530
+ I +KI D++ AK+ K QVK+ + G++IG G +
Sbjct: 82 LDFITDKIREKPDITKALTEADAKQAQERDK-------QVKILVPNTTAGMIIGKAGAYI 134
Query: 531 RDFIVDLG 554
+ + G
Sbjct: 135 KQIKEESG 142
Score = 60.1 bits (144), Expect = 2e-08
Identities = 33/98 (33%), Positives = 60/98 (60%), Gaps = 3/98 (3%)
Frame = +3
Query: 105 VNSAVAGSGSGSGDLPTGTQQVVAK---LLVSNSIAGSVIGKAGANIEQLQRSSGARVQL 275
+N+A GS S PT + +K + + I G+++G AG ++ ++Q SGA +Q+
Sbjct: 408 LNAAAQTLGSLSKS-PTPAEMTTSKEKNVEIPEVIVGAILGPAGRSLVEIQHISGANIQI 466
Query: 276 SRAGEFYPGTSDRVLLLSGSLHAVLTAIFLILEKISRD 389
S+ G F PGT +R++ ++G +A+ A +LI E+IS++
Sbjct: 467 SKKGIFAPGTRNRIVTITGQQNAINVAQYLIEERISQE 504
Score = 49.3 bits (116), Expect = 3e-05
Identities = 37/111 (33%), Positives = 54/111 (48%)
Frame = +3
Query: 81 EVPDIDKFVNSAVAGSGSGSGDLPTGTQQVVAKLLVSNSIAGSVIGKAGANIEQLQRSSG 260
E PDI K + A A + K+LV N+ AG +IGKAGA I+Q++ SG
Sbjct: 91 EKPDITKALTEADAKQAQ--------ERDKQVKILVPNTTAGMIIGKAGAYIKQIKEESG 142
Query: 261 ARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTAIFLILEKISRDVSAGAGAN 413
+ VQ+S+ + +R + + G A +IL KI D S+G N
Sbjct: 143 SYVQISQKPKDLT-LQERCITIIGEKENNRIACKMILAKIVEDPSSGTCLN 192
>sp|Q80WA4|NOA1_RAT RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1)
gi|30230625|gb|AAP20872.1| neuro-oncological ventral
antigen 1-like protein [Rattus norvegicus]
Length = 474
Score = 75.5 bits (184), Expect = 5e-13
Identities = 51/159 (32%), Positives = 76/159 (47%)
Frame = +3
Query: 78 VEVPDIDKFVNSAVAGSGSGSGDLPTGTQQVVAKLLVSNSIAGSVIGKAGANIEQLQRSS 257
++ PD K A +GS Q K+L+ + AGS+IGK G I QLQ+ +
Sbjct: 19 LDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKET 78
Query: 258 GARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTAIFLILEKISRDVSAGAGANGAKRGVPV 437
GA ++LS++ +FYPGT++RV L+ G++ A+ I EKI A P
Sbjct: 79 GATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQ 138
Query: 438 KKPEDAGQAQVKLALSRRLCGLLIGHKGQTVRDFIVDLG 554
QVK+ + GL+IG G TV+ + G
Sbjct: 139 TTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSG 177
Score = 59.3 bits (142), Expect = 3e-08
Identities = 29/91 (31%), Positives = 54/91 (58%)
Frame = +3
Query: 111 SAVAGSGSGSGDLPTGTQQVVAKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGE 290
S +A S + T + V ++ V ++ G+++GK G + + Q +GAR+Q+S+ GE
Sbjct: 378 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 437
Query: 291 FYPGTSDRVLLLSGSLHAVLTAIFLILEKIS 383
F PGT +R + ++G+ A A +LI ++I+
Sbjct: 438 FVPGTRNRKVTITGTPAATQAAQYLITQRIT 468
Score = 52.4 bits (124), Expect = 4e-06
Identities = 30/79 (37%), Positives = 46/79 (57%)
Frame = +3
Query: 177 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 356
K++V NS AG +IGK GA ++ + SGA VQLS+ + +RV+ +SG A
Sbjct: 150 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 208
Query: 357 IFLILEKISRDVSAGAGAN 413
+ LI++KI D +G+ N
Sbjct: 209 VELIIQKIQEDPQSGSCLN 227
>ref|XP_214825.2| similar to astrocytic NOVA-like RNA-binding protein [Rattus
norvegicus]
Length = 490
Score = 73.9 bits (180), Expect = 1e-12
Identities = 43/119 (36%), Positives = 63/119 (52%)
Frame = +3
Query: 177 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 356
K+L+ + AGS+IGK G I QLQ+ +GA ++LS++ +FYPGT++RV L+ G+ A+ A
Sbjct: 34 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAA 93
Query: 357 IFLILEKISRDVSAGAGANGAKRGVPVKKPEDAGQAQVKLALSRRLCGLLIGHKGQTVR 533
I EK+ A P Q KL + GL+IG G TV+
Sbjct: 94 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 152
Score = 59.7 bits (143), Expect = 3e-08
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 111 SAVAGSGSG---SGDLPTGTQQVVAKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSR 281
+A AG+ G + L + + + ++ V ++ G+++GK G + + Q +GAR+Q+S+
Sbjct: 383 AAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 442
Query: 282 AGEFYPGTSDRVLLLSGSLHAVLTAIFLILEKISRDVSAGAGANGAKRGVPVKKPEDAG 458
GEF PGT +R + ++GS A A +LI ++++ + +GV P+ G
Sbjct: 443 KGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE-----------QGVRASNPQKVG 490
Score = 55.5 bits (132), Expect = 5e-07
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Frame = +3
Query: 174 AKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLT 353
AKL+V NS AG +IGK GA ++ + SGA VQLS+ E +RV+ +SG V
Sbjct: 131 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHK 189
Query: 354 AIFLILEKISRDVS------------AGAGANGAKRGVPVKKPED 452
A+ I++K+ D AG AN G P P D
Sbjct: 190 AVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 234
