Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001621A_C01 KCC001621A_c01
(535 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM18796.1| ribosomal protein S5 precursor [Chlamydomonas rei... 197 9e-50
ref|NP_180936.1| ribosomal protein S5 family [Arabidopsis thalia... 102 2e-21
ref|ZP_00106123.1| COG0098: Ribosomal protein S5 [Nostoc punctif... 101 5e-21
sp|O24705|RS5_SYNP6 30S ribosomal protein S5 gi|2446906|dbj|BAA2... 101 5e-21
emb|CAA63650.1| ribosomal protein S5 [Spinacia oleracea] 101 7e-21
>gb|AAM18796.1| ribosomal protein S5 precursor [Chlamydomonas reinhardtii]
Length = 673
Score = 197 bits (500), Expect = 9e-50
Identities = 102/103 (99%), Positives = 103/103 (99%)
Frame = +3
Query: 6 RSVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKR 185
+SVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKR
Sbjct: 571 KSVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKR 630
Query: 186 IGCRSLLNNARCAVAALEQLRTLQEVSKARGVPMDRLLLPSSK 314
IGCRSLLNNARCAVAALEQLRTLQEVSKARGVPMDRLLLPSSK
Sbjct: 631 IGCRSLLNNARCAVAALEQLRTLQEVSKARGVPMDRLLLPSSK 673
>ref|NP_180936.1| ribosomal protein S5 family [Arabidopsis thaliana]
gi|25408312|pir||G84749 30S ribosomal protein S5
[imported] - Arabidopsis thaliana
gi|1707008|gb|AAC69132.1| 30S ribosomal protein S5
[Arabidopsis thaliana] gi|15450886|gb|AAK96714.1| 30S
ribosomal protein S5 [Arabidopsis thaliana]
gi|20259882|gb|AAM13288.1| 30S ribosomal protein S5
[Arabidopsis thaliana] gi|21593322|gb|AAM65271.1| 30S
ribosomal protein S5 [Arabidopsis thaliana]
Length = 303
Score = 102 bits (255), Expect = 2e-21
Identities = 45/97 (46%), Positives = 72/97 (73%)
Frame = +3
Query: 6 RSVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKR 185
R++V+VP+ T PHR E + AA+ ++ PA+ GTGV+AG ++R VLE+AGV+N L K+
Sbjct: 205 RNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQ 264
Query: 186 IGCRSLLNNARCAVAALEQLRTLQEVSKARGVPMDRL 296
+G + LNNAR +AA++Q+R ++V++ RG+PM+ L
Sbjct: 265 LGSNNALNNARATLAAVQQMRQFRDVAQERGIPMEEL 301
>ref|ZP_00106123.1| COG0098: Ribosomal protein S5 [Nostoc punctiforme]
Length = 175
Score = 101 bits (252), Expect = 5e-21
Identities = 48/99 (48%), Positives = 72/99 (72%)
Frame = +3
Query: 6 RSVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKR 185
+ ++ +P+ + +IPH ++ A+ +M PAA GTGV+AG ++R+VLELAGV+NVLAK+
Sbjct: 77 KHLIDIPITKSNSIPHPIDGVGGGAKVIMRPAAPGTGVIAGGAVRTVLELAGVRNVLAKQ 136
Query: 186 IGCRSLLNNARCAVAALEQLRTLQEVSKARGVPMDRLLL 302
+G + LNNAR AV AL LRTL EV++ RG+P+ L +
Sbjct: 137 LGSNNPLNNARAAVNALSTLRTLSEVAEDRGIPIQNLYI 175
>sp|O24705|RS5_SYNP6 30S ribosomal protein S5 gi|2446906|dbj|BAA22465.1| 30S ribosomal
protein S5 [Synechococcus sp.]
Length = 180
Score = 101 bits (252), Expect = 5e-21
Identities = 51/97 (52%), Positives = 73/97 (74%)
Frame = +3
Query: 6 RSVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKR 185
+ +V VPL +IPH + AA+ ++ PAA GTGV+AG ++R+VLELAGV+NVLAKR
Sbjct: 83 KHLVNVPLTRDQSIPHPSTGEGGAAQVLIRPAAPGTGVIAGGAVRTVLELAGVKNVLAKR 142
Query: 186 IGCRSLLNNARCAVAALEQLRTLQEVSKARGVPMDRL 296
+G +S LNNAR A+ AL LRT QEV+++R +P+++L
Sbjct: 143 LGSKSPLNNARAALEALSSLRTFQEVAQSRDIPVEQL 179
>emb|CAA63650.1| ribosomal protein S5 [Spinacia oleracea]
Length = 308
Score = 101 bits (251), Expect = 7e-21
Identities = 45/97 (46%), Positives = 70/97 (71%)
Frame = +3
Query: 6 RSVVRVPLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKR 185
R+++ VP+ T PHR EA + AAR ++ PAA GTGV+AG ++R+VLE+AGV+N L K+
Sbjct: 210 RNIITVPMTKYLTFPHRNEADYGAARVMLRPAAPGTGVIAGGAVRTVLEMAGVENALGKQ 269
Query: 186 IGCRSLLNNARCAVAALEQLRTLQEVSKARGVPMDRL 296
+G + LNNAR + A++ +R +V++ RG+PM+ L
Sbjct: 270 LGSNNALNNARATIVAVQTMRQFSDVARDRGIPMEEL 306
