Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001612A_C01 KCC001612A_c01
(731 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens] 62 9e-09
ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens] gi... 54 2e-06
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [... 53 6e-06
gb|AAB91452.1| CTG26 alternate open reading frame [Homo sapiens] 52 7e-06
ref|NP_883796.1| flagellar hook-length control protein [Bordetel... 52 9e-06
>gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]
Length = 46
Score = 62.0 bits (149), Expect = 9e-09
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 517 SRCCYCCCSCSCCCCCCCCCC 455
SRCC CCC C CCCCCCCCCC
Sbjct: 9 SRCCCCCCCCCCCCCCCCCCC 29
Score = 58.5 bits (140), Expect = 1e-07
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCCCCC 455
CC CCC C CCCCCCCCCC
Sbjct: 12 CCCCCCCCCCCCCCCCCCC 30
Score = 58.5 bits (140), Expect = 1e-07
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCCCCC 455
CC CCC C CCCCCCCCCC
Sbjct: 13 CCCCCCCCCCCCCCCCCCC 31
Score = 58.5 bits (140), Expect = 1e-07
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCCCCC 455
CC CCC C CCCCCCCCCC
Sbjct: 14 CCCCCCCCCCCCCCCCCCC 32
Score = 58.5 bits (140), Expect = 1e-07
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCCCCC 455
CC CCC C CCCCCCCCCC
Sbjct: 15 CCCCCCCCCCCCCCCCCCC 33
Score = 54.3 bits (129), Expect = 2e-06
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCCCCC 455
CC CCC C CCCCCCCC C
Sbjct: 17 CCCCCCCCCCCCCCCCCFC 35
Score = 54.3 bits (129), Expect = 2e-06
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCCCCC 455
CC CCC C CCCCCC CCC
Sbjct: 19 CCCCCCCCCCCCCCCFCCC 37
Score = 54.3 bits (129), Expect = 2e-06
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCCCCC 455
CC CCC C CCCCCCC CC
Sbjct: 18 CCCCCCCCCCCCCCCCFCC 36
Score = 40.8 bits (94), Expect = 0.022
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCCCCC 455
C C CCCCCCCCCC
Sbjct: 2 CELCPDRSRCCCCCCCCCC 20
>ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens]
gi|21751020|dbj|BAC03887.1| unnamed protein product
[Homo sapiens] gi|33872427|gb|AAH16304.1| FLJ35107
protein [Homo sapiens]
Length = 258
Score = 53.9 bits (128), Expect = 2e-06
Identities = 43/124 (34%), Positives = 60/124 (47%), Gaps = 1/124 (0%)
Frame = +1
Query: 268 SICSCVNGATHSVSSRINPSSCPPSAS*QRYHPPLH*PTTSLTEQSARAPPAGRGIPQCH 447
S S + ++ S SS + SS PS+S P++S S +P + P
Sbjct: 131 SSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS 190
Query: 448 CLSSSSSSSSNS-RSSCNSSSSSGCSSPSTATAMALMGSLRRVAAGRPAAAGGAAPTGRR 624
S SSSSSS S RSS SSSSS SSPST++ + S ++ P+AA G P +
Sbjct: 191 SSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPSSSCPSAALGRRPQSPQ 250
Query: 625 AGAC 636
+ C
Sbjct: 251 SSHC 254
Score = 44.3 bits (103), Expect = 0.002
Identities = 34/127 (26%), Positives = 63/127 (48%)
Frame = +1
Query: 301 SVSSRINPSSCPPSAS*QRYHPPLH*PTTSLTEQSARAPPAGRGIPQCHCLSSSSSSSSN 480
S+ S + SS P S+ H ++ + S +P + SSS+SSSS+
Sbjct: 54 SIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSS 113
Query: 481 SRSSCNSSSSSGCSSPSTATAMALMGSLRRVAAGRPAAAGGAAPTGRRAGACGSSTALFA 660
S SS +SSSSS SSPS++++ S ++ P+++ + + + + SS+ +
Sbjct: 114 SSSSPSSSSSSSSSSPSSSSSSP--SSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSS 171
Query: 661 AVAALGS 681
+ ++ GS
Sbjct: 172 SPSSSGS 178
Score = 43.9 bits (102), Expect = 0.003
Identities = 35/121 (28%), Positives = 61/121 (49%), Gaps = 1/121 (0%)
Frame = +1
Query: 292 ATHSVSSRINPSSCPPSAS*QRYHPPLH*PTTSLTEQSARAPPAGRGIPQCHCLSSSSSS 471
++ S SS +PSS S+S P ++S + S+ + P+ SSSSSS
Sbjct: 94 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 153
Query: 472 -SSNSRSSCNSSSSSGCSSPSTATAMALMGSLRRVAAGRPAAAGGAAPTGRRAGACGSST 648
SS+S SS +SSSS SSPS++ + + ++ ++ ++P+ R + SS+
Sbjct: 154 PSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSS 213
Query: 649 A 651
+
Sbjct: 214 S 214
Score = 43.1 bits (100), Expect = 0.004
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +1
Query: 292 ATHSVSSRINP-SSCPPSAS*QRYHPPLH*PTTSLTEQSARAPPAGRGIPQCHCLSSSSS 468
++HS SS + SS PS+S P +S + S+ + P+ SS SS
Sbjct: 67 SSHSSSSPSSSHSSSSPSSSSSTSSP------SSSSSSSSSSSPSSSNSSSSSSSSSPSS 120
Query: 469 SSSNSRSSCNSSSSSGCSSPSTATAMALMGSLRRVAAGRPAAAGGAAPTGRRAGACGSS 645
SSS+S SS +SSSSS SS S++++ S ++ +++ ++P+ + GSS
Sbjct: 121 SSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSS 179
Score = 42.4 bits (98), Expect = 0.008
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Frame = +1
Query: 127 SHGRARSNFDRNPSPVSRDPGRQPG-----PAPTAALLISHPDSVQ*CHTELSICSCVNG 291
S + S+ +PS S P P+ +++ S P S S S +
Sbjct: 106 SSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSS--------SSSSPSSS 157
Query: 292 ATHSVSSRINPSSCPPSAS*QRYHPPLH*PTTSLTEQSARAPPAGRGIPQCHCLSSSSSS 471
++ S SS +PSS PS+S P++S + S+ + P+ SSSSSS
Sbjct: 158 SSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPS---PRSSSPSSSSSS 214
Query: 472 SSNSRSSCNSSSSSGCSSPSTATAMALMG 558
+S+ +S SSSS SSPS++ A +G
Sbjct: 215 TSSPSTSSPSSSSPSSSSPSSSCPSAALG 243
Score = 41.2 bits (95), Expect = 0.017
Identities = 35/117 (29%), Positives = 58/117 (48%), Gaps = 1/117 (0%)
Frame = +1
Query: 304 VSSRINPSSCPPSAS*QRYHPPLH*PTTSLTEQSARAPPAGRGIPQCHCLSSSSSSSSNS 483
+SS I SS P S+S H ++ + S+ +P + SSSSSSS S
Sbjct: 46 LSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSS--S 103
Query: 484 RSSCNSSSSSGCSSPSTATAMALMG-SLRRVAAGRPAAAGGAAPTGRRAGACGSSTA 651
SS NSSSSS SSPS++++ + S + +++ ++P+ + SS++
Sbjct: 104 PSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSS 160
>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
glycopeptide AFGP polyprotein precursor
Length = 507
Score = 52.8 bits (125), Expect = 6e-06
Identities = 62/219 (28%), Positives = 83/219 (37%)
Frame = +2
Query: 5 AAVTAATRTPRLVAPWHLECQALSSRTWATTCNTNFLAAYTHMGVHGATLTGTPHPSAGT 184
AA A TP A E A ++ T AT AA AT T A T
Sbjct: 40 AATPATAATPATAATAATEATAATAATPAT-------AATPATAATAATTAAT----AAT 88
Query: 185 QAGSQDPRRRQRCS*ATRTPSSSAIPSSPSAAA*TVPHTQFRQELILAPARQVPPSSATT 364
A + P R R + TP+++A P++ + AA T PAR P++A T
Sbjct: 89 AATAATPARAARAA----TPATAATPATAATAA-----TAATAATAETPARAATPATAAT 139
Query: 365 HHSISPLPA*PNRALERLLRDEASRSATVSAAAAAAAATAGAAATAVAAAAVALPQLLQP 544
+ + A+ + +AA +A AATA AAT AA A P
Sbjct: 140 PATAAT---------------PATAATAATAATSATAATAARAATPATAATPATPATAAR 184
Query: 545 WLSWAACAGSPPGAPQLPAAPPLPAGALARAAAPLRSSR 661
A A + A AA A A AA P R++R
Sbjct: 185 AARAATPATAATAATAATAATAATAATAATAATPARAAR 223
Score = 49.3 bits (116), Expect = 6e-05
Identities = 70/244 (28%), Positives = 90/244 (36%), Gaps = 25/244 (10%)
Frame = +2
Query: 5 AAVTAATRTPRLVAPWHLECQALSSRTWATTCNTNFLAAYTHMGVHGATLTGTPHPS--- 175
AA A TP A A ++ T AT AA AT P P+
Sbjct: 182 AARAARAATPATAATAATAATAATAATAATAAT----AATPARAARAATPATAPTPATAA 237
Query: 176 -------AGTQAGSQDPRRRQRCS*ATR-----TPSSSAIPSSPSAAA*TVPHTQFRQEL 319
A T + P R R + T ++ A P++P+ AA T
Sbjct: 238 TPATAATAATAPTAATPARAARAATPATAATLATAATPATPATPATAA-----TDATAAT 292
Query: 320 ILAPARQVPPSSATTHHSISPLPA*PNRALERLLRDEASRSATVSAAAAAA--------- 472
PAR P++ T + PA P A A+ +AT + AA AA
Sbjct: 293 AATPARAATPATPAT----AATPATPATAATAATAATAATAATPARAARAATPATAATPA 348
Query: 473 -AATAGAAATAVAAAAVALPQLLQPWLSWAACAGSPPGAPQLPAAPPLPAGALARAAAPL 649
AATA AATA AA A P + AA A +P A AA A A AA P
Sbjct: 349 TAATAATAATAATAATAATP-------ARAARAATP--ATAATAATAATAATAATAATPA 399
Query: 650 RSSR 661
R++R
Sbjct: 400 RAAR 403
Score = 43.1 bits (100), Expect = 0.004
Identities = 54/213 (25%), Positives = 72/213 (33%)
Frame = +2
Query: 8 AVTAATRTPRLVAPWHLECQALSSRTWATTCNTNFLAAYTHMGVHGATLTGTPHPSAGTQ 187
A A TP A A ++ T AT A T +A T
Sbjct: 303 ATPATAATPATPATAATAATAATAATAATPARAARAATPATAATPATAATAATAATAATA 362
Query: 188 AGSQDPRRRQRCS*ATRTPSSSAIPSSPSAAA*TVPHTQFRQELILAPARQVPPSSATTH 367
A + P R R AT +++A ++ +A A T T R PA P++ T
Sbjct: 363 ATAATPARAARA--ATPATAATAATAATAATAATAA-TPARAARAATPATPATPATPAT- 418
Query: 368 HSISPLPA*PNRALERLLRDEASRSATVSAAAAAAAATAGAAATAVAAAAVALPQLLQPW 547
A+ + +AA AA AATA AATA A A
Sbjct: 419 --------------------PATAATAATAATAATAATAATAATAATAPTPARAARAATP 458
Query: 548 LSWAACAGSPPGAPQLPAAPPLPAGALARAAAP 646
+ A A +P AA A ARA+ P
Sbjct: 459 ATGATPATAPTAGTAATAATAATAATPARASTP 491
Score = 39.3 bits (90), Expect = 0.064
Identities = 44/172 (25%), Positives = 62/172 (35%)
Frame = +2
Query: 8 AVTAATRTPRLVAPWHLECQALSSRTWATTCNTNFLAAYTHMGVHGATLTGTPHPSAGTQ 187
A A TP A A ++ T AT A T +A T
Sbjct: 333 ARAARAATPATAATPATAATAATAATAATAATAATPARAARAATPATAATAATAATAATA 392
Query: 188 AGSQDPRRRQRCS*ATRTPSSSAIPSSPSAAA*TVPHTQFRQELILAPARQVPPSSATTH 367
A + P R R + TP++ A P++P+ AA A A ++
Sbjct: 393 ATAATPARAARAA-TPATPATPATPATPATAA---------TAATAATAATAATAATAAT 442
Query: 368 HSISPLPA*PNRALERLLRDEASRSATVSAAAAAAAATAGAAATAVAAAAVA 523
+ +P PA RA A+ + +A AA AATA AAT A+ A
Sbjct: 443 AATAPTPARAARAATPATG--ATPATAPTAGTAATAATAATAATPARASTPA 492
Score = 33.5 bits (75), Expect = 3.5
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -1
Query: 704 APPSSSSTDPSAATAAKSAVELPHAPARRPVGAAPPAAAGRPAA 573
A P+++ T +AATAA +A A A P AA P A PAA
Sbjct: 462 ATPATAPTAGTAATAATAATAATPARASTPATAATPVTAATPAA 505
Score = 33.5 bits (75), Expect = 3.5
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +2
Query: 431 ASRSATVSAAA----AAAAATAGAAATAVAAAAVALPQLLQPWLSWAACAGSPPGAPQLP 598
A+R+AT + AA AA ATA AAT AA A P + P
Sbjct: 31 AARAATPATAATPATAATPATAATAATEATAATAATP-----------ATAATPATAATA 79
Query: 599 AAPPLPAGALARAAAPLRSSR 661
A A A AA P R++R
Sbjct: 80 ATTAATAATAATAATPARAAR 100
Score = 33.1 bits (74), Expect = 4.6
Identities = 25/66 (37%), Positives = 29/66 (43%)
Frame = -3
Query: 642 AAARASAPAGRGGAAGSCGAPGGDPAQAAHESHGCSS*GRATAAAATAVAAAPAVAAAAA 463
AA A+AP A + A G PA A + G A AA A AA PA A+ A
Sbjct: 440 AATAATAPTPARAARAATPATGATPATA-------PTAGTAATAATAATAATPARASTPA 492
Query: 462 AAAETV 445
AA V
Sbjct: 493 TAATPV 498
Score = 33.1 bits (74), Expect = 4.6
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 642 AAARASAPAGRGGAAGSCGAPGGDPAQAAHESHGCSS*GRATAAAA--TAVAAAPAVAAA 469
AA A+A A + A PA+AA + ++ ATAA A A AA PA AA
Sbjct: 344 AATPATAATAATAATAATAATAATPARAARAATPATAATAATAATAATAATAATPARAAR 403
Query: 468 AAAAA 454
AA A
Sbjct: 404 AATPA 408
Score = 32.7 bits (73), Expect = 6.0
Identities = 29/81 (35%), Positives = 37/81 (44%), Gaps = 8/81 (9%)
Frame = -3
Query: 642 AAARASAPAGRGGAAGSCGAPGGDPAQAAHESHGCSS*GRATAA----AATA----VAAA 487
AA A+A A + A PA+AA + ++ ATAA AATA AA
Sbjct: 194 AATAATAATAATAATAATAATAATPARAARAATPATAPTPATAATPATAATAATAPTAAT 253
Query: 486 PAVAAAAAAAAETVALRDASS 424
PA AA AA A L A++
Sbjct: 254 PARAARAATPATAATLATAAT 274
>gb|AAB91452.1| CTG26 alternate open reading frame [Homo sapiens]
Length = 124
Score = 52.4 bits (124), Expect = 7e-06
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2
Query: 502 CCCSCSCCCCCCCCCC 455
CCC C CCCCCCCCCC
Sbjct: 102 CCCCCCCCCCCCCCCC 117
Score = 48.1 bits (113), Expect = 1e-04
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 508 CYCCCSCSCCCCCCCC 461
C CCC C CCCCCCCC
Sbjct: 102 CCCCCCCCCCCCCCCC 117
Score = 48.1 bits (113), Expect = 1e-04
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2
Query: 511 CCYCCCSCSCCCCCCC 464
CC CCC C CCCCCCC
Sbjct: 102 CCCCCCCCCCCCCCCC 117
>ref|NP_883796.1| flagellar hook-length control protein [Bordetella parapertussis]
gi|33573156|emb|CAE36807.1| flagellar hook-length
control protein [Bordetella parapertussis]
Length = 438
Score = 52.0 bits (123), Expect = 9e-06
Identities = 60/165 (36%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 158 GTPH-PSAGTQAGSQDPRRRQRCS*ATRTPSSSAIPSSPS-AAA*TVPHTQFRQELILAP 331
GTP P A A +Q P AT+ P+ + P P AA V Q A
Sbjct: 56 GTPAAPGAQAGAPAQGP--------ATQNPAGAGKPGKPGDTAALPVDGQQEPAAETAAD 107
Query: 332 ARQVPPSSATTHHSISPLPA*PNRALERLLRDEASRSATVSAAAAAAAATAGAAATAVAA 511
A + +A T +P PA P +ALE A+ +A V+A AAA AGAAA A
Sbjct: 108 AATLAALAAQT----APAPALPLQALEI-----AAEAAAVNAQVAAATQAAGAAARQPAH 158
Query: 512 AAVALPQLLQPWLSWAACAGSPPGAPQLPAAPPLPAGALARAAAP 646
AA+ Q P A AG+PP A PA PP AL +AA P
Sbjct: 159 AALLAGQPAAP-----AAAGAPP-ADTAPAMPP----ALPQAAQP 193
Score = 35.4 bits (80), Expect = 0.92
Identities = 33/82 (40%), Positives = 41/82 (49%), Gaps = 6/82 (7%)
Frame = -3
Query: 654 ERSGAAAR----ASAPAGRGGAAGSCGAPGGDPAQAAHESHGCSS*GRATAAAATAVAAA 487
+ +GAAAR A+ AG+ A + GAP D A A + AA AVAA
Sbjct: 147 QAAGAAARQPAHAALLAGQPAAPAAAGAPPADTAPAMPPA--------LPQAAQPAVAAQ 198
Query: 486 PAVAAAA--AAAAETVALRDAS 427
AVAA+A A AAET A A+
Sbjct: 199 AAVAASAPNAPAAETAATPPAA 220
