Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001609A_C01 KCC001609A_c01
(573 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc... 37 0.25
ref|NP_885561.1| conserved hypothetical protein [Bordetella para... 35 0.56
dbj|BAC84845.1| cell wall protein-like [Oryza sativa (japonica c... 35 0.73
gb|AAO50887.1| hypothetical protein [Dictyostelium discoideum] 35 0.73
ref|NP_890383.1| conserved hypothetical protein [Bordetella bron... 35 0.73
>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680] gi|29605870|dbj|BAC69934.1| putative
protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 36.6 bits (83), Expect = 0.25
Identities = 34/99 (34%), Positives = 41/99 (41%)
Frame = +2
Query: 179 RVKLPASSLNPHRWTPRSARRLSPASNRRRLSTVTCSRIVSGASSQTPSSALVATRFPPP 358
R PASS P RW+P + PAS + + ASS PS+ + P
Sbjct: 301 RPSWPASSTRPWRWSPSPTAAVGPASPK------------AAASSCLPSTGAPSRHRRSP 348
Query: 359 SCFPRSGASSVTSP*TALRLLW*QRSSSRLRWRSSARVT 475
PRSGA S T T +RS R RSSA T
Sbjct: 349 ---PRSGAGSRTRTPTCWCCA--RRSGGTARRRSSAGTT 382
>ref|NP_885561.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33574347|emb|CAE38683.1| conserved hypothetical
protein [Bordetella parapertussis]
Length = 319
Score = 35.4 bits (80), Expect = 0.56
Identities = 32/107 (29%), Positives = 54/107 (49%), Gaps = 3/107 (2%)
Frame = -2
Query: 413 SEPFRG-LSHSMPHFLGSSLAAEIG*QPVPSLESGLMHQTQSESRSQSIA-VFCLTQVKG 240
++P RG LS P F+ + + G P+ ++ ++H Q+ SR+ ++ V T + G
Sbjct: 2 TQPLRGGLSGREPLFIVLNTGS--GRDDAPAAQAAIVHVLQAASRAHTLMPVSDATALPG 59
Query: 239 DARTGAS-SDAD*GLTRAASPDVTASSTTKAATSIVRIVLGYGLPFG 102
AR + A+ G+ AA D T ++ + R VLG G+PFG
Sbjct: 60 VARQAVERARAEGGIVVAAGGDGTLNA-------VARAVLGSGVPFG 99
>dbj|BAC84845.1| cell wall protein-like [Oryza sativa (japonica cultivar-group)]
Length = 450
Score = 35.0 bits (79), Expect = 0.73
Identities = 31/100 (31%), Positives = 43/100 (43%)
Frame = +2
Query: 188 LPASSLNPHRWTPRSARRLSPASNRRRLSTVTCSRIVSGASSQTPSSALVATRFPPPSCF 367
L + S P R + S+R LSP S+ R ++V +SS +P S + PP
Sbjct: 264 LASPSTEPRRCSSSSSRSLSPGSSSRGAASVVGIVAAWSSSSSSPCSRCRLSSSPPRR-- 321
Query: 368 PRSGASSVTSP*TALRLLW*QRSSSRLRWRSSARVTARLR 487
RS +SS +S SR WRSS R +R
Sbjct: 322 SRSSSSSSSS------------RRSRSSWRSSLRRAVLVR 349
>gb|AAO50887.1| hypothetical protein [Dictyostelium discoideum]
Length = 1325
Score = 35.0 bits (79), Expect = 0.73
Identities = 24/65 (36%), Positives = 35/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 221 TPRSARR-LSPASNRRRLSTVTCSRIVSGASSQTPSSALVATRFPPPSCFPRSGASSVTS 397
+P+S RR +SPAS +T T + S +SS +PSS+ AT P + S +SS +
Sbjct: 102 SPKSTRRAISPASASTLTTTTTTTTTSSSSSSSSPSSSSSATTSPVNNTSTTSSSSSSAT 161
Query: 398 P*TAL 412
T L
Sbjct: 162 TTTLL 166
>ref|NP_890383.1| conserved hypothetical protein [Bordetella bronchiseptica]
gi|33577265|emb|CAE35822.1| conserved hypothetical
protein [Bordetella bronchiseptica]
Length = 319
Score = 35.0 bits (79), Expect = 0.73
Identities = 32/107 (29%), Positives = 54/107 (49%), Gaps = 3/107 (2%)
Frame = -2
Query: 413 SEPFRG-LSHSMPHFLGSSLAAEIG*QPVPSLESGLMHQTQSESRSQSIA-VFCLTQVKG 240
++P RG LS P F+ + + G P+ ++ ++H Q+ SR+ ++ V T + G
Sbjct: 2 TQPLRGGLSGREPLFIVLNTGS--GRDDAPAAQAAIVHVLQAASRAHTLMPVSDATALPG 59
Query: 239 DARTGAS-SDAD*GLTRAASPDVTASSTTKAATSIVRIVLGYGLPFG 102
AR + A+ G+ AA D T ++ + R VLG G+PFG
Sbjct: 60 VARQAVERACAEGGIVVAAGGDGTLNA-------VARAVLGSGVPFG 99
