Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001605A_C01 KCC001605A_c01
(573 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO53242.1| ribosomal protein L4 [Chlamydomonas reinhardtii] 169 2e-41
gb|AAP79151.1| ribosomal protein rpL4 [Bigelowiella natans] 76 4e-13
ref|ZP_00074128.1| COG0088: Ribosomal protein L4 [Trichodesmium ... 61 1e-08
ref|NP_923032.1| 50S ribosomal protein L4 [Gloeobacter violaceus... 58 8e-08
ref|NP_488254.1| 50S ribosomal protein L4 [Nostoc sp. PCC 7120] ... 57 2e-07
>gb|AAO53242.1| ribosomal protein L4 [Chlamydomonas reinhardtii]
Length = 243
Score = 169 bits (428), Expect = 2e-41
Identities = 95/105 (90%), Positives = 95/105 (90%)
Frame = +3
Query: 3 LQSATADMIVVESLAGKLQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNI 182
LQSATADMIVVESLAGKLQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNI
Sbjct: 140 LQSATADMIVVESLAGKLQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNI 199
Query: 183 AKLTMNTASAISVFDVLNADHIII*GRGPGCTCMSFYGAAAPASA 317
AKLTMNTASAISVFDVLNADHIII SFYGAAAPASA
Sbjct: 200 AKLTMNTASAISVFDVLNADHIIIEDEAL-AHVQSFYGAAAPASA 243
>gb|AAP79151.1| ribosomal protein rpL4 [Bigelowiella natans]
Length = 335
Score = 75.9 bits (185), Expect = 4e-13
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +3
Query: 3 LQSATADMIVVESLAGKLQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNI 182
LQSA++D+I+VE L GK + KTK+M L+++GA E KVLL+ + ++ + L+ RNI
Sbjct: 224 LQSASSDVILVEDLDGKFESPKTKNMADFLDRVGAKPSEEKVLLVVEGQKRNALLSARNI 283
Query: 183 AKLTMNTASAISVFDVLNADHIII 254
KL +N +++ + DVL AD II+
Sbjct: 284 DKLKINKPTSLRIIDVLGADKIIM 307
>ref|ZP_00074128.1| COG0088: Ribosomal protein L4 [Trichodesmium erythraeum IMS101]
Length = 212
Score = 61.2 bits (147), Expect = 1e-08
Identities = 31/82 (37%), Positives = 56/82 (67%)
Frame = +3
Query: 6 QSATADMIVVESLAGKLQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNIA 185
QS + D+IV+E L+ + KTK +V + + G + ++ K++L+ E++ +V L+GRNIA
Sbjct: 115 QSRSEDLIVIEDLSEQFTKPKTKELVQAITRWGID-IQAKIVLVLPEKQENVYLSGRNIA 173
Query: 186 KLTMNTASAISVFDVLNADHII 251
KL + A+ ++++D+L AD II
Sbjct: 174 KLKIILANNLNIYDILAADKII 195
>ref|NP_923032.1| 50S ribosomal protein L4 [Gloeobacter violaceus]
gi|35210646|dbj|BAC88027.1| 50S ribosomal protein L4
[Gloeobacter violaceus]
Length = 213
Score = 58.2 bits (139), Expect = 8e-08
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 LQSATADMIVVESLAGKLQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNI 182
LQS D+IVV+ G+L KT+ +V E+ G + + +LLI +E + + L+ RN+
Sbjct: 114 LQSRVEDLIVVDEFEGQLAAPKTRELVQAFERWGVDMASQSILLILRERQTNTYLSARNL 173
Query: 183 AKLTMNTASAISVFDVLNADHIII*GRGPGCTCM-SFYGAAA 305
+ + TA ++V D+L D I++ GP + YGA A
Sbjct: 174 PNVKVITAGNLNVRDLLATDWIVV--TGPALELIKETYGAVA 213
>ref|NP_488254.1| 50S ribosomal protein L4 [Nostoc sp. PCC 7120]
gi|25295003|pir||AG2332 50S ribosomal protein L4
[imported] - Nostoc sp. (strain PCC 7120)
gi|17133349|dbj|BAB75913.1| 50S ribosomal protein L4
[Nostoc sp. PCC 7120]
Length = 210
Score = 56.6 bits (135), Expect = 2e-07
Identities = 31/78 (39%), Positives = 48/78 (60%)
Frame = +3
Query: 21 DMIVVESLAGKLQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNIAKLTMN 200
D+I+VE + +L KTK +VA + GA E K+LLI E +V L+ RNI L +
Sbjct: 120 DLILVEEFSNELSRPKTKDLVAAFTRWGAEP-ESKILLILSEFPENVYLSARNIENLKLI 178
Query: 201 TASAISVFDVLNADHIII 254
A ++V+D+L+AD I++
Sbjct: 179 AADQLNVYDLLHADKIVV 196
