Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001593A_C01 KCC001593A_c01
(571 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ64638.1| NADH:ubiquinone oxidoreductase B17.2-like subunit... 330 8e-90
ref|NP_566192.1| expressed protein [Arabidopsis thaliana] gi|126... 90 2e-17
gb|AAG46149.1|AC018727_1 putative ubiquinone oxidoreductase subu... 87 2e-16
ref|ZP_00053221.1| COG3761: NADH:ubiquinone oxidoreductase 17.2 ... 78 1e-13
ref|NP_354333.1| AGR_C_2444p [Agrobacterium tumefaciens] gi|1793... 76 3e-13
>gb|AAQ64638.1| NADH:ubiquinone oxidoreductase B17.2-like subunit [Chlamydomonas
reinhardtii]
Length = 156
Score = 330 bits (846), Expect = 8e-90
Identities = 151/151 (100%), Positives = 151/151 (100%)
Frame = +2
Query: 119 MSLSGYFSRLLEASGKKSVGSFFASWEFGKMLVDGNLAHNVLVRATGAGRLVGTDYNGNR 298
MSLSGYFSRLLEASGKKSVGSFFASWEFGKMLVDGNLAHNVLVRATGAGRLVGTDYNGNR
Sbjct: 1 MSLSGYFSRLLEASGKKSVGSFFASWEFGKMLVDGNLAHNVLVRATGAGRLVGTDYNGNR 60
Query: 299 YYENEEAAYGRRRWIVYKDKFDYNPTTIPPEWHGWLNYINDYNPTNTQFKQPTYQIEASM 478
YYENEEAAYGRRRWIVYKDKFDYNPTTIPPEWHGWLNYINDYNPTNTQFKQPTYQIEASM
Sbjct: 61 YYENEEAAYGRRRWIVYKDKFDYNPTTIPPEWHGWLNYINDYNPTNTQFKQPTYQIEASM 120
Query: 479 TKTGTQTCYNPKGSWFSAKPRNWRKYESWTP 571
TKTGTQTCYNPKGSWFSAKPRNWRKYESWTP
Sbjct: 121 TKTGTQTCYNPKGSWFSAKPRNWRKYESWTP 151
>ref|NP_566192.1| expressed protein [Arabidopsis thaliana]
gi|12644540|sp|Q9M9M9|N7BM_ARATH Probable
NADH-ubiquinone oxidoreductase subunit B17.2 (Complex
I-B17.2) (CI-B17.2) gi|6714426|gb|AAF26114.1|AC012328_17
unknown protein [Arabidopsis thaliana]
gi|13878173|gb|AAK44164.1|AF370349_1 unknown protein
[Arabidopsis thaliana] gi|17104529|gb|AAL34153.1|
unknown protein [Arabidopsis thaliana]
gi|21593289|gb|AAM65238.1| probable NADH-ubiquinone
oxidoreductase subunit B17.2 (Complex I-B17.2)
(CI-B17.2) [Arabidopsis thaliana]
Length = 159
Score = 90.1 bits (222), Expect = 2e-17
Identities = 53/152 (34%), Positives = 74/152 (47%), Gaps = 11/152 (7%)
Frame = +2
Query: 149 LEASGKKSVGSFFASWE---FGKMLVDGNLA----HNVLVRATGAGRLVGTDYNGNRYYE 307
LEA +K +G F F + L DGNL HN+ LVG D GN+YY+
Sbjct: 10 LEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNI------GATLVGVDKFGNKYYQ 63
Query: 308 N-EEAAYGRRRWIVYKDKFDYNPTTIPPEWHGWLNYINDYNPTN-TQFKQPTYQIE--AS 475
+ YGR RW+ Y K YN + +P EWHGWL++I D+ K Y +E +
Sbjct: 64 KLGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKEN 123
Query: 476 MTKTGTQTCYNPKGSWFSAKPRNWRKYESWTP 571
+ G Y+ KG + +NW +Y+SW P
Sbjct: 124 FSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVP 155
>gb|AAG46149.1|AC018727_1 putative ubiquinone oxidoreductase subunit [Oryza sativa]
gi|31433693|gb|AAP55177.1| putative ubiquinone
oxidoreductase subunit [Oryza sativa (japonica
cultivar-group)]
Length = 160
Score = 87.0 bits (214), Expect = 2e-16
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Frame = +2
Query: 206 KMLVDGNLA----HNVLVRATGAGRLVGTDYNGNRYYEN-EEAAYGRRRWIVYKDKFDYN 370
K L+DGNL HN+ LVG D GN+YYE + YGR RW+ Y +K YN
Sbjct: 31 KCLLDGNLLQTKIHNI------GATLVGVDKFGNKYYEKLHDTQYGRHRWVEYAEKGRYN 84
Query: 371 PTTIPPEWHGWLNYINDYNPTNTQFKQPTYQI---EASMTKTGTQTCYNPKGSWFSAKPR 541
+ +PPEWHGWL++I D + I + + + G + Y+ KG + R
Sbjct: 85 ASQVPPEWHGWLHHITDSTGDELLEQNAKAYIVDHKENFSGEGEELIYHSKGHALNPGQR 144
Query: 542 NWRKYESWTP 571
+W +Y+ W P
Sbjct: 145 DWTRYQPWEP 154
>ref|ZP_00053221.1| COG3761: NADH:ubiquinone oxidoreductase 17.2 kD subunit
[Magnetospirillum magnetotacticum]
Length = 132
Score = 77.8 bits (190), Expect = 1e-13
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +2
Query: 263 GRLVGTDYNGNRYYENEEAAYGRR--RWIVYKDKFDYNPTTIPPEWHGWLNYINDYNPTN 436
G+LVGTD GNRYY AA GRR RW++YK K + + + PEWH WL+Y +D P
Sbjct: 30 GKLVGTDAEGNRYYTERSAAKGRRTKRWVIYKGKAE--ASRVAPEWHAWLHYTSD-KPLT 86
Query: 437 TQFKQPTYQIEASMTKTGTQTCYNPKGSWFSA--KPRNWRKYESWTP 571
+QP +Q KTG+ Y P G + + R YE+W P
Sbjct: 87 DVARQP-WQKPHQSNKTGSPEAYLPPGHDLAGGKRDRATGDYEAWQP 132
>ref|NP_354333.1| AGR_C_2444p [Agrobacterium tumefaciens]
gi|17935227|ref|NP_532017.1| conserved hypothetical
protein [Agrobacterium tumefaciens str. C58 (U.
Washington)] gi|25383320|pir||AG2739 conserved
hypothetical protein Atu1327 [imported] - Agrobacterium
tumefaciens (strain C58, Dupont) gi|25383321|pir||E97520
13kda differentiation-associated protein [imported] -
Agrobacterium tumefaciens (strain C58, Cereon)
gi|15156382|gb|AAK87118.1| AGR_C_2444p [Agrobacterium
tumefaciens str. C58 (Cereon)]
gi|17739737|gb|AAL42333.1| conserved hypothetical
protein [Agrobacterium tumefaciens str. C58 (U.
Washington)]
Length = 132
Score = 76.3 bits (186), Expect = 3e-13
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Frame = +2
Query: 167 KSVGSFFASWEFGKMLVDGNLAHNVLVRATGAGRLVGTDYNGNRYYENEEAAYGR-RRWI 343
+++G+ F +W FGK VG D GN YYE ++G RRW+
Sbjct: 15 QTIGTRFHTWRFGKK--------------------VGQDELGNTYYEGGTTSWGMPRRWV 54
Query: 344 VYKDKFDYNPTTIPPEWHGWLNYINDYNPTNTQFKQPTYQIEASMTKTGTQTCYNPKGSW 523
+Y + + IPP WHGW++Y D P+ + +Q TG+ Y P+GS
Sbjct: 55 IYNGYAE--ASAIPPGWHGWMHYRTDVPPSQESYTARDWQKPHQPNHTGSSKAYRPQGSL 112
Query: 524 FSA--KPRNWRKYESWTP 571
A +PR Y++WTP
Sbjct: 113 AVAGERPRVTGDYDAWTP 130
