Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001556A_C01 KCC001556A_c01
(543 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175852.1| rubredoxin -related [Arabidopsis thaliana] gi|2... 144 1e-33
ref|NP_113406.1| rubredoxin [Guillardia theta] gi|25396843|pir||... 130 9e-30
gb|AAM93983.1| rubredoxin [Griffithsia japonica] 114 1e-24
gb|AAM82725.1| RubR [Synechococcus sp. PCC 7942] 94 9e-19
sp|Q9XBL8|RUBR_ANAVA Rubredoxin (Rd) gi|5139340|emb|CAB45645.1| ... 93 2e-18
>ref|NP_175852.1| rubredoxin -related [Arabidopsis thaliana] gi|25405740|pir||H96586
hypothetical protein F20D21.31 [imported] - Arabidopsis
thaliana gi|4585992|gb|AAD25628.1|AC005287_30
Hypothetical protein [Arabidopsis thaliana]
gi|13926206|gb|AAK49581.1|AF370575_1 Unknown protein
[Arabidopsis thaliana]
gi|14190439|gb|AAK55700.1|AF378897_1 At1g54500/F20D21_31
[Arabidopsis thaliana] gi|15450567|gb|AAK96461.1|
At1g54500/F20D21_31 [Arabidopsis thaliana]
gi|21554009|gb|AAM63090.1| rubredoxin, putative
[Arabidopsis thaliana]
Length = 195
Score = 144 bits (362), Expect = 1e-33
Identities = 65/120 (54%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Frame = +3
Query: 183 EAERKKLE--AEKLRAAEKFMVIGSGSATCKGCGYEYKPEKGDPEFPVAPGTTYQSLPED 356
E E K++E EK R EKF V+ +G C+ CGY+Y GDP +P+ PG + LPED
Sbjct: 73 ETETKEVEDTIEKRRMEEKFAVLNTGIYECRSCGYKYDESAGDPSYPIPPGFQFDKLPED 132
Query: 357 YTCPICGAPKTKFESRVKVVAGFAENQQYGLGGNSMTEAQKSGLIYGALALFFALFLAGY 536
+ CP CGA ++ FES++ +AGFA+NQQYGLGGN++T QK+GLI+G+L LFFALFL+GY
Sbjct: 133 WRCPTCGAAQSFFESKMVEIAGFAQNQQYGLGGNALTSGQKTGLIFGSLLLFFALFLSGY 192
>ref|NP_113406.1| rubredoxin [Guillardia theta] gi|25396843|pir||G90103 rubredoxin
[imported] - Guillardia theta nucleomorph
gi|4583668|emb|CAB40406.1| rubredoxin [Guillardia theta]
Length = 159
Score = 130 bits (328), Expect = 9e-30
Identities = 65/135 (48%), Positives = 86/135 (63%)
Frame = +3
Query: 138 VRVFSSTETDPELMGEAERKKLEAEKLRAAEKFMVIGSGSATCKGCGYEYKPEKGDPEFP 317
++V SS +D E + E +L+ AEKFM I G C+ CGY Y+PEKGD
Sbjct: 28 IQVNSSNLSDEEKSSRID----EILRLKNAEKFMEIDEGKYECEACGYIYEPEKGDKFAG 83
Query: 318 VAPGTTYQSLPEDYTCPICGAPKTKFESRVKVVAGFAENQQYGLGGNSMTEAQKSGLIYG 497
+ PGT + L + + CP C +PK +F+S KV+AGFAENQ+YGLGGNS+T QK+ LIYG
Sbjct: 84 IPPGTPFVDLSDSFMCPACRSPKNQFKSIKKVIAGFAENQKYGLGGNSLTSGQKNTLIYG 143
Query: 498 ALALFFALFLAGYAL 542
L L F L L+GY +
Sbjct: 144 VLVLLFLLLLSGYLI 158
>gb|AAM93983.1| rubredoxin [Griffithsia japonica]
Length = 187
Score = 114 bits (284), Expect = 1e-24
Identities = 57/122 (46%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Frame = +3
Query: 186 AERKKLEAEKLRAAEKFMVIGSGSATCKGCGYEYKPEKGDPEFPVAPGTTYQSLPEDYTC 365
+ER+K E ++LRAAEKF+ I G C CGY Y+P KG+ +APGT + L + +TC
Sbjct: 68 SERQK-EIDRLRAAEKFVTIDEGKFECTACGYVYEPSKGELRSNIAPGTAFADLSDSFTC 126
Query: 366 PICGAPKTKFESRVKVVAGFAENQQYGLGGNSMTEAQKSGLIY---GALALFFALFLAGY 536
P C PK +F +R K++AGFA+NQ YG GGN +T +KS LI+ + FF FL+G
Sbjct: 127 PQCRTPKRRFIARKKIIAGFADNQSYGFGGNGLTGGEKSLLIFWWSDYMVSFF--FLSGX 184
Query: 537 AL 542
A+
Sbjct: 185 AM 186
>gb|AAM82725.1| RubR [Synechococcus sp. PCC 7942]
Length = 138
Score = 94.4 bits (233), Expect = 9e-19
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = +3
Query: 264 CKGCGYEYKPEKGDPEFPVAPGTTYQSLPEDYTCPICGAPKTKFES--RVKVVAGFAENQ 437
C+ CGY Y+P +GDP +A GT ++ +P ++ CPICG+P+++F + + +GF+EN
Sbjct: 43 CRSCGYIYEPNEGDPRRQIAAGTVFEEVPSNWRCPICGSPRSQFRNIGPKGIPSGFSENL 102
Query: 438 QYGLGGNSMTEAQKSGLIYGALALFFALFLAGYAL 542
YGLG N++T QK+ LI+GAL L FL+ Y L
Sbjct: 103 GYGLGVNTLTPGQKNLLIFGALGLAVLFFLSLYGL 137
>sp|Q9XBL8|RUBR_ANAVA Rubredoxin (Rd) gi|5139340|emb|CAB45645.1| rubredoxin [Anabaena
variabilis]
Length = 111
Score = 93.2 bits (230), Expect = 2e-18
Identities = 45/95 (47%), Positives = 60/95 (62%), Gaps = 2/95 (2%)
Frame = +3
Query: 264 CKGCGYEYKPEKGDPEFPVAPGTTYQSLPEDYTCPICGAPKTKFES--RVKVVAGFAENQ 437
C+ CGY Y+PEKGD + +AP T + LP ++ CP+C A K F + +GF EN
Sbjct: 16 CRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGPAGTASGFRENL 75
Query: 438 QYGLGGNSMTEAQKSGLIYGALALFFALFLAGYAL 542
YGLG N +T AQK+ LI+GALAL F F++ Y L
Sbjct: 76 GYGLGVNKLTPAQKNILIFGALALGFLFFISLYGL 110
