KCC001555A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001555A_C01 KCC001555A_c01
gacatcattaccctgggcgccaagcccctgttcttccttgactactacgcaaccggccac
ctggacgtggacaccgccgaGAAGGTCATCAAGGGCATCGTCGACGGCTGCAACGACTCC
GACTGCATCCTGCTGGGTGGCGAGACCGCGGAGATGCCCGGATTCTACCAGAAGGGCGAG
TATGACCTGGCCGGCTTCGCGGTTGGCGCCGTGAAGAAGGACAGGGTGATTGACGGCAAG
ACCATTAAGGCCGGCGATGTGGTGCTGGGCCTGGCGTCCAGCGGCGTGCACTCCAACGGC
TTCTCGCTCGTGCGCAAGGTTCTGGAGGTGTCCAACACCAGCCTGCACGCGCCCTGCCCC
TGGGACTCGGGCAAGTCCATGGGCGAGGCGCTCATCACCCCCACCGTCATCTACGTGCGC
AAGGTCCTGGAGCTGCACGAGAAGGTGGGCCTGAAGGGCGTGGTGCACATCACGGGCGGC
GGCATGCCCGAGAACATCCCGCGCGTCATCCCCAAGGGCCTGGGCGTCAACGTCAAGGAC
GGGTCGTGGGAGGTGCCGGAGCTGTTCAAGTGGGTGCAGGCCACCGGCAAGGTGCCCATC
GACGACATGCGCCGCACCTTCAACATGGGCGTGGGCCTCATTATGGTGGTGGACCCCTCC
AAGGTCGCCGACATCCAGAAGATCGCGCCCGATGCATTCCTGCTCGGCGAGGTGGTGCCC
GGCAACGGCGTCAAGTACGTGTAAATCAGCGAGCTGACGTGGGTATGTGTGCGAGCTCAG
TAATTGTCGCGACAGACGGCGGCGAGCCGTCGCGCGAGCGCGGCTGCGCGTGAGGAGCTG
CGTAAGCGGCGGCGTAAGCGAGCAAGCAAGCTGGTGCACTGCTGGGATGCGTGTTGGGTT
GTCGGTGTTTGATGTGTTGTTTCGCTTCGTCGTTCTGGTGGTGCTGCTGCGTGGCGCCAG
CGGCAGGGTCGGAAGGCGGGGGCTTTTCGCGCCCTCCTGGACATAGGGCAGACCCGTTCA
TCTCGATTTCGTCAGAAGGCATTTTGGCGCCCCGCTTCGTGCATTGCGGTGAGGGCGGGT
GCATGTGTGTTGCGGCAGCTCCGTGTCTGTTGTGCGCGGTTTGGTCGGCAACAGCTGCGA
GCGGCGCTGCCACGGCGGGCAATGGCTATGGCAAAAGTGGCGAGCAGCAGGAGGAGGAGG
GAGCACAGCGCTAGACAGAGCATTAGTAACAAGGTGCGATTGCCGCGGGTGGCTCGTCAG
GGCCTCGGAGCACCTTGCGTAAGGCTGTACAGGCGGCGCAAAACCGCTTGTTGCGAAAGG
TTTAGGGGGTAGCTATCTGGACTGCGCGCGGGTAGATAGTCTCGTTGTTAGGGCATAGAT
ATTGGACCCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001555A_C01 KCC001555A_c01
         (1391 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P52424|PUR5_VIGUN Phosphoribosylformylglycinamidine cyclo-lig...   314  3e-84
gb|AAO39864.1| putative 5'-phosphoribosyl-5-aminoimidazole synth...   312  8e-84
ref|NP_191061.1| phosphoribosylformylglycinamidine cyclo-ligase ...   305  1e-81
pir||JQ2256 phosphoribosylformylglycinamidine cyclo-ligase (EC 6...   273  5e-72
ref|NP_622256.1| Phosphoribosylaminoimidazol (AIR) synthetase [T...   261  3e-68

>sp|P52424|PUR5_VIGUN Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
           precursor (AIRS) (Phosphoribosyl-aminoimidazole
           synthetase) (AIR synthase) gi|7437995|pir||T10963
           phosphoribosylformylglycinamidine cyclo-ligase (EC
           6.3.3.1) - cowpea gi|945060|gb|AAC14578.1|
           aminoimidazole ribonucleotide (AIRS) synthetase [Vigna
           unguiculata]
          Length = 388

 Score =  314 bits (804), Expect = 3e-84
 Identities = 153/249 (61%), Positives = 193/249 (77%), Gaps = 3/249 (1%)
 Frame = +1

Query: 1   DIITLGAKPLFFLDYYATGHLDVDTAEKVIKGIVDGCNDSDCILLGGETAEMPGFYQKGE 180
           DI+T GAKPLFFLDY+ATG LDVD AEKV+KGIVDGC  SDC+LLGGETAEMPG Y++GE
Sbjct: 140 DIVTSGAKPLFFLDYFATGRLDVDVAEKVVKGIVDGCKQSDCVLLGGETAEMPGLYKEGE 199

Query: 181 YDLAGFAVGAVKKDRVIDGKTIKAGDVVLGLASSGVHSNGFSLVRKVLEVSNTSLHAPCP 360
           YDL+G AVG VKKD VI+GK I AGDV++GL SSGVHSNGFSLVR+VL  S  SL    P
Sbjct: 200 YDLSGCAVGIVKKDSVINGKNIVAGDVIIGLPSSGVHSNGFSLVRRVLAQSGLSLKDQLP 259

Query: 361 WDSGKSMGEALITPTVIYVRKVLELHEKVGLKGVVHITGGGMPENIPRVIPKGLGVNVKD 540
             S  ++ EAL+ PTVIYV++VL+L  K G+KG+ HITGGG  +NIPRV P+GLG  + D
Sbjct: 260 -GSNITLAEALMAPTVIYVKQVLDLISKGGVKGIAHITGGGFTDNIPRVFPEGLGALIYD 318

Query: 541 GSWEVPELFKWVQATGKVPIDDMRRTFNMGVGLIMVVDP---SKVADIQKIAPDAFLLGE 711
           GSWEVP +F+W+Q  GK+   +MRRTFNMG+G+I+VV P   +++ + +  A   + +GE
Sbjct: 319 GSWEVPAVFRWLQEAGKIEDSEMRRTFNMGIGMILVVSPEAANRILENKGQADKFYRIGE 378

Query: 712 VVPGNGVKY 738
           ++ GNGV +
Sbjct: 379 IISGNGVTF 387

>gb|AAO39864.1| putative 5'-phosphoribosyl-5-aminoimidazole synthetase [Oryza
           sativa (japonica cultivar-group)]
           gi|31249753|gb|AAP46245.1| putative
           5'-phosphoribosyl-5-aminoimidazole synthetase [Oryza
           sativa (japonica cultivar-group)]
          Length = 398

 Score =  312 bits (800), Expect = 8e-84
 Identities = 155/252 (61%), Positives = 191/252 (75%), Gaps = 5/252 (1%)
 Frame = +1

Query: 1   DIITLGAKPLFFLDYYATGHLDVDTAEKVIKGIVDGCNDSDCILLGGETAEMPGFYQKGE 180
           DI+T GAKPLFFLDYYAT  LDVD AEKVIKGIVDGC  SDC LLGGETAEMP FY++GE
Sbjct: 147 DIVTSGAKPLFFLDYYATSKLDVDLAEKVIKGIVDGCRQSDCALLGGETAEMPDFYKEGE 206

Query: 181 YDLAGFAVGAVKKDRVIDGKTIKAGDVVLGLASSGVHSNGFSLVRKVLEVSNTSLHAPCP 360
           YDL+GFAVGAVKKD+VIDGK I  GD+++GL SSGVHSNGFSL R+VLE S  SL+   P
Sbjct: 207 YDLSGFAVGAVKKDKVIDGKNIMEGDIIIGLPSSGVHSNGFSLARRVLEKSGLSLNDQLP 266

Query: 361 WDSG--KSMGEALITPTVIYVRKVLELHEKVGLKGVVHITGGGMPENIPRVIPKGLGVNV 534
            + G   ++GEAL+ PTVIYV++VLE+  K G+KG+ HITGGG  +NIPRV P GLG  +
Sbjct: 267 RNDGMITTVGEALMAPTVIYVKQVLEIINKGGVKGIAHITGGGFTDNIPRVFPSGLGAKI 326

Query: 535 KDGSWEVPELFKWVQATGKVPIDDMRRTFNMGVGLIMVVDPSKVADIQK--IAPD-AFLL 705
              +WEVP +F+W+Q  GK+   +MRRTFNMG+G+++VV       I +    P+ A+ +
Sbjct: 327 FTAAWEVPPVFRWIQEVGKIEDAEMRRTFNMGIGMVLVVSKEAADGILEGTHGPNHAYRI 386

Query: 706 GEVVPGNGVKYV 741
           GEV+ G GV YV
Sbjct: 387 GEVISGEGVHYV 398

>ref|NP_191061.1| phosphoribosylformylglycinamidine cyclo-ligase precursor
           [Arabidopsis thaliana] gi|21264504|sp|Q05728|PUR5_ARATH
           Phosphoribosylformylglycinamidine cyclo-ligase,
           chloroplast precursor (AIRS)
           (Phosphoribosyl-aminoimidazole synthetase) (AIR
           synthase) gi|11272444|pir||T47640
           phosphoribosylformylglycinamidine cyclo-ligase precursor
           - Arabidopsis thaliana gi|7329631|emb|CAB82696.1|
           phosphoribosylformylglycinamidine cyclo-ligase precursor
           [Arabidopsis thaliana] gi|16974615|gb|AAL31210.1|
           AT3g55010/T15C9_10 [Arabidopsis thaliana]
           gi|22655452|gb|AAM98318.1| At3g55010/T15C9_10
           [Arabidopsis thaliana]
          Length = 389

 Score =  305 bits (781), Expect = 1e-81
 Identities = 153/250 (61%), Positives = 189/250 (75%), Gaps = 4/250 (1%)
 Frame = +1

Query: 1   DIITLGAKPLFFLDYYATGHLDVDTAEKVIKGIVDGCNDSDCILLGGETAEMPGFYQKGE 180
           DIIT GAKPLFFLDY+AT  LDVD AEKVIKGIV+GC  S+C LLGGETAEMP FY +GE
Sbjct: 140 DIITSGAKPLFFLDYFATSRLDVDLAEKVIKGIVEGCRQSECALLGGETAEMPDFYAEGE 199

Query: 181 YDLAGFAVGAVKKDRVIDGKTIKAGDVVLGLASSGVHSNGFSLVRKVLEVSNTSLHAPCP 360
           YDL+GFAVG VKK  VI+GK I AGDV++GL SSGVHSNGFSLVR+VL  SN SL    P
Sbjct: 200 YDLSGFAVGIVKKTSVINGKNIVAGDVLIGLPSSGVHSNGFSLVRRVLARSNLSLKDALP 259

Query: 361 WDSGKSMGEALITPTVIYVRKVLELHEKVGLKGVVHITGGGMPENIPRVIPKGLGVNVKD 540
             S  ++G+AL+ PTVIYV++VL++ EK G+KG+ HITGGG  +NIPRV P GLG  +  
Sbjct: 260 GGS-STLGDALMAPTVIYVKQVLDMIEKGGVKGLAHITGGGFTDNIPRVFPDGLGAVIHT 318

Query: 541 GSWEVPELFKWVQATGKVPIDDMRRTFNMGVGLIMVVDPSKVADIQKIAPD----AFLLG 708
            +WE+P LFKW+Q TG++   +MRRTFN+G+G++MVV P   + I +   +    A+ +G
Sbjct: 319 DAWELPPLFKWIQQTGRIEDSEMRRTFNLGIGMVMVVSPEAASRILEEVKNGDYVAYRVG 378

Query: 709 EVVPGNGVKY 738
           EVV G GV Y
Sbjct: 379 EVVNGEGVSY 388

>pir||JQ2256 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
           precursor - Arabidopsis thaliana
           gi|289188|gb|AAC37341.1|
           5'-phosphoribosyl-5-aminoimidazole synthetase
          Length = 355

 Score =  273 bits (698), Expect = 5e-72
 Identities = 135/206 (65%), Positives = 162/206 (78%)
 Frame = +1

Query: 1   DIITLGAKPLFFLDYYATGHLDVDTAEKVIKGIVDGCNDSDCILLGGETAEMPGFYQKGE 180
           DIIT GAKPLFFLDY+AT  LDVD AEKVIKGIV+GC  S+C LLGGETAEMP FY +GE
Sbjct: 140 DIITSGAKPLFFLDYFATSRLDVDLAEKVIKGIVEGCRQSECALLGGETAEMPDFYAEGE 199

Query: 181 YDLAGFAVGAVKKDRVIDGKTIKAGDVVLGLASSGVHSNGFSLVRKVLEVSNTSLHAPCP 360
           YDL+GFAVG VKK  VI+GK I AGDV++GL SSGVHSNGFSLVR+VL  SN SL    P
Sbjct: 200 YDLSGFAVGIVKKTSVINGKNIVAGDVLIGLPSSGVHSNGFSLVRRVLARSNLSLKDALP 259

Query: 361 WDSGKSMGEALITPTVIYVRKVLELHEKVGLKGVVHITGGGMPENIPRVIPKGLGVNVKD 540
             S  ++G+AL+ PTVIYV++VL++ EK G+KG+ HITGGG  +NIPRV P GLG  +  
Sbjct: 260 GGS-STLGDALMAPTVIYVKQVLDMIEKGGVKGLAHITGGGFTDNIPRVFPDGLGAVIHT 318

Query: 541 GSWEVPELFKWVQATGKVPIDDMRRT 618
            +WE+P LFKW+Q TG++   +MRRT
Sbjct: 319 DAWELPPLFKWIQQTGRIEDSEMRRT 344

>ref|NP_622256.1| Phosphoribosylaminoimidazol (AIR) synthetase [Thermoanaerobacter
           tengcongensis] gi|20515576|gb|AAM23860.1|
           Phosphoribosylaminoimidazol (AIR) synthetase
           [Thermoanaerobacter tengcongensis]
          Length = 336

 Score =  261 bits (666), Expect = 3e-68
 Identities = 126/248 (50%), Positives = 183/248 (72%), Gaps = 5/248 (2%)
 Frame = +1

Query: 1   DIITLGAKPLFFLDYYATGHLDVDTAEKVIKGIVDGCNDSDCILLGGETAEMPGFYQKGE 180
           D+I +GAKPLFFLDY+ATG L+ + A +VIKG+ +GC  + C L+GGETAE+PGFY++GE
Sbjct: 87  DVIVVGAKPLFFLDYFATGKLESEKAIQVIKGVAEGCEIAGCALIGGETAELPGFYKEGE 146

Query: 181 YDLAGFAVGAVKKDRVIDGKTIKAGDVVLGLASSGVHSNGFSLVRKV-LEVSNTSLHAPC 357
           YDLAGF VG V+K+ +ID  ++  GDVV+GL+SSG+HSNG+SLVRKV  E +N S+    
Sbjct: 147 YDLAGFCVGIVEKEEIIDTSSMAIGDVVIGLSSSGLHSNGYSLVRKVFFEKNNFSIEDYV 206

Query: 358 PWDSGKSMGEALITPTVIYVRKVLELHEKVGLKGVVHITGGGMPENIPRVIPKGLGVNVK 537
           P D GK++GE L+TPT IYV+ V E+ + + +KG+ HITGGG  ENIPR++ KG+   + 
Sbjct: 207 P-DIGKTLGEVLLTPTKIYVKSV-EVLKGLKIKGMAHITGGGFIENIPRILRKGVSARIY 264

Query: 538 DGSWEVPELFKWVQATGKVPIDDMRRTFNMGVGLIMVVDPSKVAD----IQKIAPDAFLL 705
            GSWEVP +F  ++  G++   +M RTFNMG+G+++++D  +V      ++++   AF++
Sbjct: 265 KGSWEVPIIFDMIRRLGEIEEKEMYRTFNMGIGMVVIIDKEEVEKALKRLKEVGETAFVI 324

Query: 706 GEVVPGNG 729
           GE+V G G
Sbjct: 325 GEIVEGEG 332



EST assemble image


clone accession position
1 MX001c06_r BP086066 1 419
2 LC045e06_r AV622280 181 575
3 MX201a07_r BP089117 190 545
4 LC044f06_r AV622133 226 770
5 LC046d04_r AV622193 556 1050
6 LC071e09_r AV623998 557 707
7 LC090e08_r AV625294 619 1143
8 HC010f10_r AV632637 649 1150
9 CM062b07_r AV390154 778 1391




Chlamydomonas reinhardtii
Kazusa DNA Research Institute