Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001542A_C01 KCC001542A_c01
(537 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_652555.1| CG13779-PA [Drosophila melanogaster] gi|7297216... 62 4e-09
gb|AAH50505.1| Unknown (protein for MGC:56203) [Danio rerio] 60 1e-08
ref|NP_006295.1| candidate for split hand/foot malformation type... 60 1e-08
ref|XP_328619.1| predicted protein [Neurospora crassa] gi|289240... 58 7e-08
dbj|BAB90351.1| B1012D10.27 [Oryza sativa (japonica cultivar-gro... 57 1e-07
>ref|NP_652555.1| CG13779-PA [Drosophila melanogaster] gi|7297216|gb|AAF52481.1|
CG13779-PA [Drosophila melanogaster]
gi|17944561|gb|AAL48168.1| RH34416p [Drosophila
melanogaster]
Length = 79
Score = 62.4 bits (150), Expect = 4e-09
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +3
Query: 267 PEAAKEPVAKEEAKPQEPVADLLEADDLFEEFGTSEWQATKDDESVPMWEADWEDENVAD 446
P+ KE KEE + LLE DD FEEF +++ D+E + +WE +W+D+NV D
Sbjct: 4 PDKEKEK-EKEETNNKSEDLGLLEEDDEFEEFPAEDFRVGDDEEELNVWEDNWDDDNVED 62
Query: 447 DFTGRLKRELDGARMK 494
DF+ +LK L+ +M+
Sbjct: 63 DFSQQLKAHLESKKME 78
>gb|AAH50505.1| Unknown (protein for MGC:56203) [Danio rerio]
Length = 70
Score = 60.5 bits (145), Expect = 1e-08
Identities = 26/58 (44%), Positives = 36/58 (61%)
Frame = +3
Query: 306 KPQEPVADLLEADDLFEEFGTSEWQATKDDESVPMWEADWEDENVADDFTGRLKRELD 479
K Q LLE DD FEEF +W +DE +WE +W+D+NV DDF+ +L+ EL+
Sbjct: 4 KKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELE 61
>ref|NP_006295.1| candidate for split hand/foot malformation type 1; deleted in
split-hand/split-foot 1 [Homo sapiens]
gi|6677941|ref|NP_033195.1| split hand/foot deleted gene
1 [Mus musculus] gi|7531100|sp|Q13437|DSS1_HUMAN Deleted
in split hand/split foot protein 1 (Split hand/foot
deleted protein 1) gi|7512379|pir||G02284 deleted in
split hand/split foot 1 - human gi|24158726|pdb|1IYJ|A
Chain A, Structure Of A Brca2-Dss1 Complex
gi|24158728|pdb|1IYJ|C Chain C, Structure Of A
Brca2-Dss1 Complex gi|24159079|pdb|1MIU|B Chain B,
Structure Of A Brca2-Dss1 Complex gi|24159088|pdb|1MJE|B
Chain B, Structure Of A Brca2-Dss1-Ssdna Complex
gi|1209724|gb|AAA91179.1| Method: conceptual translation
supplied by author gi|1209726|gb|AAA91180.1| Method:
conceptual translation supplied by author
gi|19484173|gb|AAH23490.1| Split hand/foot deleted gene
1 [Mus musculus] gi|21595825|gb|AAH32782.1| Candidate
for split hand/foot malformation type 1 [Homo sapiens]
gi|34785617|gb|AAH58117.1| Split hand/foot deleted gene
1 [Mus musculus] gi|37574288|gb|AAQ93368.1| unknown
[Homo sapiens]
Length = 70
Score = 60.5 bits (145), Expect = 1e-08
Identities = 26/58 (44%), Positives = 36/58 (61%)
Frame = +3
Query: 306 KPQEPVADLLEADDLFEEFGTSEWQATKDDESVPMWEADWEDENVADDFTGRLKRELD 479
K Q LLE DD FEEF +W +DE +WE +W+D+NV DDF+ +L+ EL+
Sbjct: 4 KKQPVDLGLLEEDDEFEEFPAEDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELE 61
>ref|XP_328619.1| predicted protein [Neurospora crassa] gi|28924035|gb|EAA33193.1|
predicted protein [Neurospora crassa]
Length = 91
Score = 58.2 bits (139), Expect = 7e-08
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Frame = +3
Query: 243 LAMTESKKPEAAKEPVAKEEAKPQEPVAD----LLEADDLFEEFGTSEWQATK------D 392
+A T+ K + EP KP++PV + +LE DD FE+F +W+A +
Sbjct: 1 MASTQPKNDAKSTEP------KPEQPVTEKKTAVLEEDDEFEDFPVDDWEAEDTEAAKGN 54
Query: 393 DESVPMWEADWEDENVADDFTGRLKREL 476
+E+ +WE W+D++ +DDF+ +LK EL
Sbjct: 55 NEAKHLWEESWDDDDTSDDFSAQLKEEL 82
>dbj|BAB90351.1| B1012D10.27 [Oryza sativa (japonica cultivar-group)]
Length = 75
Score = 57.4 bits (137), Expect = 1e-07
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +3
Query: 291 AKEEAKPQEPVADLLEADDLFEEFGTS-EWQATKD-DESVPMWEADWEDENVADDFTGRL 464
AK +A + DLLE DD FEEF EW ++ +E+V WE DW+D++V DDF+ +L
Sbjct: 5 AKADAAAEAAKMDLLEDDDEFEEFEIDQEWDDKEEGNEAVQQWEDDWDDDDVNDDFSLQL 64
Query: 465 KRELDGARMKD 497
++EL+ K+
Sbjct: 65 RKELESIPSKN 75
