KCC001529A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001529A_C01 KCC001529A_c01
gtcgtacgccatcaccaccgacaagctggaCGCGCTGTACCAGCAGCTGAAGCCCAAGGG
TGTCACCATGACCGCCCTGCTGGCCAAGGCCTGCGGTGTGGCCCTGGCCAAGCACCCGCT
GCTGTACGCTGCTTGCACTCCCGACGGCAACGGCATCACCTACAGCAGCCAGATTAACGT
GGCGCTGGCCGTGGCCATGCCCGACGGCGGTCTGATCACCCCTGTGCTGAAGAACGCGGA
CTCCACGGACCTGTACCAGATGTCGCGCAACTGGGCTGACCTGGTCAAGCGCGCTCGCTC
CAAGCAGCTGCAGCCCGATGAGTACAACAGCGGCAACTTCACCATCTCCAACCTGGGCAT
GTACGGCGTGGAGACCTTCGACGCCATCCTGCCGCCCGGCACTGCCGCCATCATGGCGGT
GGGCGGCTCCAAGCCCACCGTGGTGGCCAGCCCCGACGGCATGATCGGCGTGAAGAAGGT
CATGAACGTCAACCTGACGGCCGACCACCGCATCGTGTACGGTGCCGACGCCGCCGAGTT
CCTGCAGACGCTCAAGGCTGTGATTGAGAACCCCGACCAGCTGCTGTTCTAAGCAGACCG
GCTACTACACGCTGCAGCGGCTGTGCTTAGCAGCAGCTAAAGCTACTAGGTGGGCTGCAG
GTTTAGCTGTGGCGGCTTGCAGCGCGCCTAGCGAAGGTGATGGATGGTGCCGCTGATGGT
TGGATGGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001529A_C01 KCC001529A_c01
         (729 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_174703.1| dihydrolipoamide S-acetyltransferase -related [...   262  5e-69
gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [A...   262  5e-69
pir||F86468 protein F12K21.24 [imported] - Arabidopsis thaliana ...   259  3e-68
ref|NP_874795.1| Dihydrolipoamide S-acetyltransferase [Prochloro...   258  7e-68
dbj|BAB01047.1| dihydrolipoamide S-acetyltransferase [Arabidopsi...   257  1e-67

>ref|NP_174703.1| dihydrolipoamide S-acetyltransferase -related [Arabidopsis
           thaliana] gi|12323852|gb|AAG51893.1|AC023913_1
           dihydrolipoamide S-acetyltransferase, putative;
           19109-21166 [Arabidopsis thaliana]
           gi|22135832|gb|AAM91102.1| At1g34430/F7P12_2
           [Arabidopsis thaliana] gi|24111345|gb|AAN46796.1|
           At1g34430/F7P12_2 [Arabidopsis thaliana]
          Length = 465

 Score =  262 bits (669), Expect = 5e-69
 Identities = 128/195 (65%), Positives = 161/195 (81%)
 Frame = +2

Query: 5   YAITTDKLDALYQQLKPKGVTMTALLAKACGVALAKHPLLYAACTPDGNGITYSSQINVA 184
           Y I+TD LDALY+++K KGVTMTALLAKA  +ALAKHP++ ++C  DGN   Y+S INVA
Sbjct: 273 YTISTDALDALYKKIKSKGVTMTALLAKATALALAKHPVVNSSCR-DGNSFVYNSSINVA 331

Query: 185 LAVAMPDGGLITPVLKNADSTDLYQMSRNWADLVKRARSKQLQPDEYNSGNFTISNLGMY 364
           +AVA+ DGGLITPVL+NAD  D+Y +SR W +LV +AR+KQLQP EYN+G FT+SNLGM+
Sbjct: 332 VAVAI-DGGLITPVLQNADKVDIYSLSRKWKELVDKARAKQLQPQEYNTGTFTLSNLGMF 390

Query: 365 GVETFDAILPPGTAAIMAVGGSKPTVVASPDGMIGVKKVMNVNLTADHRIVYGADAAEFL 544
           GV+ FDAILPPGT AIMAVG S+P+VVA+ DG IG+K  M VN+TADHR++YGAD A+FL
Sbjct: 391 GVDRFDAILPPGTGAIMAVGASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFL 450

Query: 545 QTLKAVIENPDQLLF 589
           QTL ++IE+P  L F
Sbjct: 451 QTLASIIEDPKDLTF 465

>gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [Arabidopsis
           thaliana]
          Length = 464

 Score =  262 bits (669), Expect = 5e-69
 Identities = 128/195 (65%), Positives = 161/195 (81%)
 Frame = +2

Query: 5   YAITTDKLDALYQQLKPKGVTMTALLAKACGVALAKHPLLYAACTPDGNGITYSSQINVA 184
           Y I+TD LDALY+++K KGVTMTALLAKA  +ALAKHP++ ++C  DGN   Y+S INVA
Sbjct: 272 YTISTDALDALYKKIKSKGVTMTALLAKATALALAKHPVVNSSCR-DGNSFVYNSSINVA 330

Query: 185 LAVAMPDGGLITPVLKNADSTDLYQMSRNWADLVKRARSKQLQPDEYNSGNFTISNLGMY 364
           +AVA+ DGGLITPVL+NAD  D+Y +SR W +LV +AR+KQLQP EYN+G FT+SNLGM+
Sbjct: 331 VAVAI-DGGLITPVLQNADKVDIYSLSRKWKELVDKARAKQLQPQEYNTGTFTLSNLGMF 389

Query: 365 GVETFDAILPPGTAAIMAVGGSKPTVVASPDGMIGVKKVMNVNLTADHRIVYGADAAEFL 544
           GV+ FDAILPPGT AIMAVG S+P+VVA+ DG IG+K  M VN+TADHR++YGAD A+FL
Sbjct: 390 GVDRFDAILPPGTGAIMAVGASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFL 449

Query: 545 QTLKAVIENPDQLLF 589
           QTL ++IE+P  L F
Sbjct: 450 QTLASIIEDPKDLTF 464

>pir||F86468 protein F12K21.24 [imported] - Arabidopsis thaliana
           gi|8778253|gb|AAF79262.1|AC023279_11 F12K21.24
           [Arabidopsis thaliana]
          Length = 467

 Score =  259 bits (662), Expect = 3e-68
 Identities = 129/197 (65%), Positives = 162/197 (81%), Gaps = 2/197 (1%)
 Frame = +2

Query: 5   YAITTDKLDALYQQLKPKGVTMTALLAKACGVALAKHPLLYAACTPDGNGITYSSQINVA 184
           Y I+TD LDALY+++K KGVTMTALLAKA  +ALAKHP++ ++C  DGN   Y+S INVA
Sbjct: 273 YTISTDALDALYKKIKSKGVTMTALLAKATALALAKHPVVNSSCR-DGNSFVYNSSINVA 331

Query: 185 LAVAMPDGGLITPVLKNADSTDLYQMSRNWADLVKRARSKQLQPDEYNSGNFTISNLGMY 364
           +AVA+ DGGLITPVL+NAD  D+Y +SR W +LV +AR+KQLQP EYN+G FT+SNLGM+
Sbjct: 332 VAVAI-DGGLITPVLQNADKVDIYSLSRKWKELVDKARAKQLQPQEYNTGTFTLSNLGMF 390

Query: 365 GVETFDAILPPGTAAIMAVGGSKPTVVASPDGMIGVKKVM--NVNLTADHRIVYGADAAE 538
           GV+ FDAILPPGT AIMAVG S+P+VVA+ DG IG+K  M  NVN+TADHR++YGAD A+
Sbjct: 391 GVDRFDAILPPGTGAIMAVGASQPSVVATKDGRIGMKNQMQVNVNVTADHRVIYGADLAQ 450

Query: 539 FLQTLKAVIENPDQLLF 589
           FLQTL ++IE+P  L F
Sbjct: 451 FLQTLASIIEDPKDLTF 467

>ref|NP_874795.1| Dihydrolipoamide S-acetyltransferase [Prochlorococcus marinus
           subsp. marinus str. CCMP1375] gi|33237379|gb|AAP99447.1|
           Dihydrolipoamide S-acetyltransferase [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 460

 Score =  258 bits (659), Expect = 7e-68
 Identities = 132/194 (68%), Positives = 157/194 (80%), Gaps = 1/194 (0%)
 Frame = +2

Query: 5   YAITTDKLDALYQQLKPKGVTMTALLAKACGVALAKHPLLYAACTPDGNGITYSSQINVA 184
           YAITTDKLDA Y+Q+KPKGVTMTALLAKA G  LA+HP L AA + +G  +TY  QINVA
Sbjct: 267 YAITTDKLDAFYKQVKPKGVTMTALLAKAVGKTLARHPQLNAAWSNEG--MTYPKQINVA 324

Query: 185 LAVAMPDGGLITPVLKNADSTDLYQMSRNWADLVKRARSKQLQPDEYNSGNFTISNLGMY 364
           +AVAM +GGLITPVL+NAD TDL+++SR WADLVKR+R+KQLQP+EYNSG FT+SNLGM+
Sbjct: 325 VAVAMEEGGLITPVLQNADLTDLFELSRQWADLVKRSRTKQLQPNEYNSGTFTLSNLGMF 384

Query: 365 GVETFDAILPPGTAAIMAVGGSKPTVVASPDGMIGVKKVMNVNLTADHRIVYGADAAEFL 544
           GV+ FDAILPP T  I+AV  S P V+A  DG I VK+ M VNLTADHR+VYGAD A FL
Sbjct: 385 GVDRFDAILPPNTGGILAVAASLPKVIAGRDGSISVKRQMQVNLTADHRVVYGADGASFL 444

Query: 545 QTLKAVIE-NPDQL 583
           + L  +IE NP+ L
Sbjct: 445 KDLANLIENNPESL 458

>dbj|BAB01047.1| dihydrolipoamide S-acetyltransferase [Arabidopsis thaliana]
          Length = 432

 Score =  257 bits (657), Expect = 1e-67
 Identities = 129/193 (66%), Positives = 155/193 (79%)
 Frame = +2

Query: 5   YAITTDKLDALYQQLKPKGVTMTALLAKACGVALAKHPLLYAACTPDGNGITYSSQINVA 184
           Y + TD LDALY+++KPKGVTMTALLAKA G+ALA+HP++ A+C  DG   +Y+S IN+A
Sbjct: 240 YPVNTDALDALYEKVKPKGVTMTALLAKAAGMALAQHPVVNASCK-DGKSFSYNSSINIA 298

Query: 185 LAVAMPDGGLITPVLKNADSTDLYQMSRNWADLVKRARSKQLQPDEYNSGNFTISNLGMY 364
           +AVA+ +GGLITPVL++AD  DLY +S+ W +LV +ARSKQLQP EYNSG FT+SNLGM+
Sbjct: 299 VAVAI-NGGLITPVLQDADKLDLYLLSQKWKELVGKARSKQLQPHEYNSGTFTLSNLGMF 357

Query: 365 GVETFDAILPPGTAAIMAVGGSKPTVVASPDGMIGVKKVMNVNLTADHRIVYGADAAEFL 544
           GV+ FDAILPPG  AIMAVG SKPTVVA  DG   VK  M VN+TADHRIVYGAD A FL
Sbjct: 358 GVDRFDAILPPGQGAIMAVGASKPTVVADKDGFFSVKNTMLVNVTADHRIVYGADLAAFL 417

Query: 545 QTLKAVIENPDQL 583
           QT   +IENPD L
Sbjct: 418 QTFAKIIENPDSL 430



EST assemble image


clone accession position
1 MX004g01_r BP086234 1 276
2 MX029d06_r BP087260 31 386
3 CM076e04_r AV391696 119 754
4 CM059e11_r AV390716 148 752




Chlamydomonas reinhardtii
Kazusa DNA Research Institute