KCC001526A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001526A_C01 KCC001526A_c01
gcacgagGCGACTTTAGCGATATGTCACTTGCATAATAAACCCCAGCTGCACGTTCGCGC
CAACCCGGCTGCGTTTTCTAGTATGGAGGCTAACCTTGACGACCTGCTGCAAGAGGCGCT
CGCGGACTTTGATGATGCCAGCGCGACAACAGTAGACCCAGCCACCGTGCAGGCGGCCGG
GAGCGAGCAGCACGCGCCGGTCAGCATTGCGACACCCGAGGTCGACAGCTCCGCTGCCAA
AGAGGAGCCAGCCAGTGCCACAGCTGCGCCAGCGGCGGCAAAGCCGGCGGGACCTAAGGG
CCTGGGTCTGGGTTTGGGGCCTGCCGGCGCCGACCCTCTCGGCCGCAAGGGCCCCCGCAA
GGCTGCCGGCGCTGCCCCGCCCACTGCTTCGGCGCCAGGCGAGCAGCCGGGACCTAGCGG
CTCAAGTGCTGATGCGGTTAAGCCGGCTGCTGGGTTGCCGAAGAATGCCCTCAACCTGAA
GCGCAGAGCTGGCTGTTGACTGCTGAGCTTATCAGGAGCGGACTGGCTGCGGTCGGTGAC
GCGGGCCTGGTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001526A_C01 KCC001526A_c01
         (552 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC82627.1| gag-like protein [Anopheles gambiae]                   51  1e-05
ref|NP_824148.1| putative 2-oxoglutarate dehydrogenase [Streptom...    51  1e-05
ref|XP_240330.2| similar to KIAA0975 protein [Rattus norvegicus]       50  2e-05
dbj|BAC65694.1| mKIAA0975 protein [Mus musculus]                       50  2e-05
ref|NP_073147.1| nischarin; imidazoline receptor I-1-like protei...    50  2e-05

>dbj|BAC82627.1| gag-like protein [Anopheles gambiae]
          Length = 357

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
 Frame = +2

Query: 128 FDDASATTVDPATV-------------QAAGSEQHAPVSIATPEVDSSAAKEEPASATAA 268
           FDDAS+  V  A V              AA     AP +I  P  ++++    PA+ATA 
Sbjct: 176 FDDASSPAVPAAPVATAALAATAFAATNAASVATAAPAAITAPAANAASTAAAPAAATAH 235

Query: 269 PAAAKPAGPKGLGLGLGPAGADPLGRKGPRKAAGAAPPTASAPGE-QPGPSGSSA 430
            A A P     L  G     + P+ +  P  AA AAP TA  PG     P+ +SA
Sbjct: 236 AATASPVATAALAAGAPATVSTPMDKDDP--AAAAAPATAEVPGAVVANPAATSA 288

>ref|NP_824148.1| putative 2-oxoglutarate dehydrogenase [Streptomyces avermitilis
           MA-4680] gi|29606622|dbj|BAC70683.1| putative
           2-oxoglutarate dehydrogenase [Streptomyces avermitilis
           MA-4680]
          Length = 1276

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 47/156 (30%), Positives = 63/156 (40%), Gaps = 23/156 (14%)
 Frame = +2

Query: 62  NPAA-FSSMEANLDDLLQEAL--------------ADFDDASATTVDPATVQAAGSEQHA 196
           NPAA F   E  +D++ Q+ L              AD+   +A    PA   AAG+ +  
Sbjct: 20  NPAAAFGPNEWLVDEIYQQYLQDPNSVDRAWWDFFADYKPGAAAASAPAGTAAAGAAETT 79

Query: 197 PVSIATPEVDSSAAKEEPASATAAPA------AAKPAGPKGLGLGLGPAGADPLGRKGPR 358
             + A P   + AA   PA A  APA      AA PA PK       PA A P      +
Sbjct: 80  TPAPAAPTAAAPAAPAAPAPAAPAPAPAAPAPAAAPAVPKPAAAAPAPAAAKPAAAAPAQ 139

Query: 359 KAAGAAPPTASAPGEQP--GPSGSSADAVKPAAGLP 460
             A AA   A  P   P  GP+ + A  +  +  +P
Sbjct: 140 PKAAAATEAAEGPTFVPLRGPAAAVAKNMNASIEVP 175

 Score = 39.3 bits (90), Expect = 0.036
 Identities = 32/110 (29%), Positives = 44/110 (39%), Gaps = 1/110 (0%)
 Frame = -1

Query: 453 PAAGLTASALEPLGPGCSPGAEAVGGAAPAALRGPLRPRGSAPAGPKPRPRPLGPAGFAA 274
           PAA   A+   P  P  +  A A    APAA     +P  +APA    +P    PA   A
Sbjct: 83  PAAPTAAAPAAPAAPAPAAPAPAPAAPAPAAAPAVPKPAAAAPAPAAAKPAAAAPAQPKA 142

Query: 273 AGAAVALAGSS-LAAELSTSGVAMLTGACCSLPAACTVAGSTVVALASSK 127
           A A  A  G + +      + VA    A   +P A +V    V  L  ++
Sbjct: 143 AAATEAAEGPTFVPLRGPAAAVAKNMNASIEVPTATSVRAVPVKLLFDNR 192

 Score = 35.4 bits (80), Expect = 0.52
 Identities = 37/107 (34%), Positives = 42/107 (38%), Gaps = 5/107 (4%)
 Frame = -1

Query: 402 SPGAEAVGGAAPAALRGPLRPRGSAPAGPKPRPRPLGPAGFAAAGA-AVALAGSSLAAEL 226
           +P   A  GAA      P  P  +APA P   P P  PA   AA A A A A    AA  
Sbjct: 66  APAGTAAAGAAETTTPAPAAPTAAAPAAP-AAPAPAAPAPAPAAPAPAAAPAVPKPAAAA 124

Query: 225 STSGVAMLTGACCSLP--AACTVA--GSTVVALASSKSASASCSRSS 97
                A    A  + P  AA T A  G T V L    +A A    +S
Sbjct: 125 PAPAAAKPAAAAPAQPKAAAATEAAEGPTFVPLRGPAAAVAKNMNAS 171

>ref|XP_240330.2| similar to KIAA0975 protein [Rattus norvegicus]
          Length = 1673

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 45/138 (32%), Positives = 60/138 (42%), Gaps = 4/138 (2%)
 Frame = +2

Query: 68   AAFSSMEANLDDLLQEALADFDDASATTVDPATVQAAGSEQHAPVSIATPEVDSSAAKEE 247
            AAF+SM + L      +  D     ++   PA  ++A        S A     + +A E 
Sbjct: 1075 AAFASMNSVL------SAPDLQSLKSSPEAPAAAESAAETPATAESAAEAPAAAESAAEA 1128

Query: 248  PA---SATAAPAAAKPAGPKGLGLGLGPAGADPLGRKGPRKAAGAAPPTASAPGEQPGPS 418
            PA   SA  APAAA+ A          PA A+    + P  A  +AP  A AP   P P+
Sbjct: 1129 PAAAESAAEAPAAAESAAE-------APAAAESAA-EAPAAAEASAPAGAPAPAGAPAPA 1180

Query: 419  GSSADAVKPA-AGLPKNA 469
            G+ A A  PA AG P  A
Sbjct: 1181 GAPAGAQAPAPAGAPAGA 1198

 Score = 38.9 bits (89), Expect = 0.047
 Identities = 40/138 (28%), Positives = 51/138 (35%), Gaps = 3/138 (2%)
 Frame = +2

Query: 29   LHNKPQLHVRANPAAFSSMEANLDDLLQEALADFDDASATTVDPATVQAAG-SEQHAPVS 205
            L + P+    A  AA +   A        A     +A A     A   AA  S   AP +
Sbjct: 1092 LKSSPEAPAAAESAAETPATAESAAEAPAAAESAAEAPAAAESAAEAPAAAESAAEAPAA 1151

Query: 206  I-ATPEVDSSAAKEEPASATAAPAAAKPAGPKGLGLGLGPAGADPLGRKGPRKAAGA-AP 379
              +  E  ++A    PA A A   A  PAG         PAGA      G +  AGA AP
Sbjct: 1152 AESAAEAPAAAEASAPAGAPAPAGAPAPAGAPAGAQAPAPAGAPAGAPAGAQALAGAQAP 1211

Query: 380  PTASAPGEQPGPSGSSAD 433
              A AP     P  + A+
Sbjct: 1212 APAGAPAGAQAPVEAQAE 1229

 Score = 37.7 bits (86), Expect = 0.10
 Identities = 38/129 (29%), Positives = 48/129 (36%), Gaps = 1/129 (0%)
 Frame = -1

Query: 528  SQSAPDKLSSQQPALRFRLRAFFGNPAAGLTASALEPLGPGCSPGAEAVGGAAPAALRGP 349
            ++SA +  ++ + A      A     A     SA E   P  +  A     AA +A   P
Sbjct: 1102 AESAAETPATAESAAEAPAAAESAAEAPAAAESAAE--APAAAESAAEAPAAAESAAEAP 1159

Query: 348  LRPRGSAPAG-PKPRPRPLGPAGFAAAGAAVALAGSSLAAELSTSGVAMLTGACCSLPAA 172
                 SAPAG P P   P  PAG  A   A A AG+   A    +G   L GA    PA 
Sbjct: 1160 AAAEASAPAGAPAPAGAP-APAGAPAGAQAPAPAGAPAGA---PAGAQALAGAQAPAPAG 1215

Query: 171  CTVAGSTVV 145
                    V
Sbjct: 1216 APAGAQAPV 1224

 Score = 32.7 bits (73), Expect = 3.4
 Identities = 33/117 (28%), Positives = 47/117 (39%), Gaps = 1/117 (0%)
 Frame = +2

Query: 59   ANPAAFSSMEANLDDLLQEALADFDDASATTVDPATVQAAGSEQHAPVSIATPEVDSSAA 238
            A  AA S+ EA       E+ A+   A+ +  +      A +   AP     P    + A
Sbjct: 1128 APAAAESAAEA---PAAAESAAEAPAAAESAAEAPAAAEASAPAGAPAPAGAPAPAGAPA 1184

Query: 239  KEEPASATAAPAAAKPAGPKGLGLGLGPAGAD-PLGRKGPRKAAGAAPPTASAPGEQ 406
              +  +   APA A PAG + L     PA A  P G + P +A    P  A  P E+
Sbjct: 1185 GAQAPAPAGAPAGA-PAGAQALAGAQAPAPAGAPAGAQAPVEAQAEVP--AQYPSER 1238

>dbj|BAC65694.1| mKIAA0975 protein [Mus musculus]
          Length = 1480

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = +2

Query: 137  ASATTVDPATVQAAGSEQHAPVSIATPEVDSSAAKEEPASATAAPAAAKPAGPKGLGLGL 316
            A A   D A VQA G ++    + A    ++ AA E PA+A A  AA  PA  +      
Sbjct: 952  AEALAPDLAPVQAPGEDRGLTSAEAPAAAEAPAAAEAPAAAEAPAAAEAPAAAEAPAAAE 1011

Query: 317  GPAGAD-PLGRKGPRKAAGAAPPTASAPGEQPGPSGSSADAVKPA 448
             PA A+ P   + P  A   A   A A  E P P+ + A A  PA
Sbjct: 1012 APAPAEAPAAAEAPAAAEAPAAAEAPASAEAPAPNQAPAPARGPA 1056

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 34/93 (36%), Positives = 43/93 (45%), Gaps = 1/93 (1%)
 Frame = +2

Query: 134  DASATTVDPATVQA-AGSEQHAPVSIATPEVDSSAAKEEPASATAAPAAAKPAGPKGLGL 310
            +A A    PA  +A A +E  AP   A    ++ AA E PA+A A  +A  PA  +    
Sbjct: 993  EAPAAAEAPAAAEAPAAAEAPAPAE-APAAAEAPAAAEAPAAAEAPASAEAPAPNQAPAP 1051

Query: 311  GLGPAGADPLGRKGPRKAAGAAPPTASAPGEQP 409
              GPA A     +GP  A G AP  A A  E P
Sbjct: 1052 ARGPAPA-----RGPAPAGGPAPAEALAQAEVP 1079

 Score = 38.5 bits (88), Expect = 0.061
 Identities = 28/91 (30%), Positives = 37/91 (39%)
 Frame = +2

Query: 134  DASATTVDPATVQAAGSEQHAPVSIATPEVDSSAAKEEPASATAAPAAAKPAGPKGLGLG 313
            +A A    PA  +A    +    + A    ++ AA E PASA A      PA  +G    
Sbjct: 999  EAPAAAEAPAAAEAPAPAEAPAAAEAPAAAEAPAAAEAPASAEAPAPNQAPAPARGPAPA 1058

Query: 314  LGPAGADPLGRKGPRKAAGAAPPTASAPGEQ 406
             GPA   P G   P +A   A   A  P E+
Sbjct: 1059 RGPA---PAGGPAPAEALAQAEVPAQYPSER 1086

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
 Frame = -1

Query: 453  PAAGLTASALEPLGPGCSPGAEAVGGAA--PAALRGPLRPRGSAP---AGPKPRPRPL-G 292
            PAA    +A E   P  +P A     AA  PAA   P      AP     P   P P  G
Sbjct: 1001 PAAAEAPAAAEAPAPAEAPAAAEAPAAAEAPAAAEAPASAEAPAPNQAPAPARGPAPARG 1060

Query: 291  PAGFAAAGAAVALAGSSLAAELSTSGVAMLTGACCSLPAACTVAGS 154
            PA       A ALA + + A+  +  +   T     +P+   V  S
Sbjct: 1061 PAPAGGPAPAEALAQAEVPAQYPSERLIQSTSEENQIPSHLPVCPS 1106

>ref|NP_073147.1| nischarin; imidazoline receptor I-1-like protein [Mus musculus]
            gi|11967433|gb|AAG42100.1|AF315344_1 nischarin [Mus
            musculus]
          Length = 1354

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
 Frame = +2

Query: 134  DASATTVDPATVQAAGSEQHAPVSIATPEVDSSAAKEEPASATAAPAAAKPAGPKGLGLG 313
            +A A    PA  +A  + +    + A    ++ AA E PA+A A  AA  PA  +     
Sbjct: 849  EAPAAAEAPAAAEAPAAAEAPAAAEAPAPAEAPAAAEAPAAAEAPAAAEAPAAAEAPASA 908

Query: 314  LGPA-GADPLGRKGPRKAAGAAPPTASAPGEQPGPSGSSADAVKPA 448
              PA    P   +GP  A G AP    AP   P P+ + A A  PA
Sbjct: 909  EAPAPNQAPAPARGPAPARGPAPAGGPAPAGGPAPAEALAQAEVPA 954

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = +2

Query: 137  ASATTVDPATVQAAGSEQHAPVSIATPEVDSSAAKEEPASATAAPAAAKPAGPKGLGLGL 316
            A A   D A VQA G ++    + A    ++ AA E PA+A A  AA  PA  +      
Sbjct: 814  AEALAPDLAPVQAPGEDRGLTSAEAPAAAEAPAAAEAPAAAEAPAAAEAPAAAEAPAAAE 873

Query: 317  GPAGAD-PLGRKGPRKAAGAAPPTASAPGEQPGPSGSSADAVKPA 448
             PA A+ P   + P  AA  AP  A AP     P+ + A A   A
Sbjct: 874  APAPAEAPAAAEAP--AAAEAPAAAEAPAAAEAPASAEAPAPNQA 916

 Score = 35.8 bits (81), Expect = 0.40
 Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
 Frame = -1

Query: 450  AAGLTASALEPLGPGCSPGAEAVG-GAAPAALRGPLRPRGSAPAGPKPRPRPLGPAGFAA 274
            AA   A+A  P        AEA     APA  RGP   RG APAG        GPA    
Sbjct: 889  AAEAPAAAEAPAAAEAPASAEAPAPNQAPAPARGPAPARGPAPAG--------GPAPAGG 940

Query: 273  AGAAVALAGSSLAAELSTSGVAMLTGACCSLPAACTVAGS 154
               A ALA + + A+  +  +   T     +P+   V  S
Sbjct: 941  PAPAEALAQAEVPAQYPSERLIQSTSEENQIPSHLPVCPS 980



EST assemble image


clone accession position
1 CM059a12_r AV390693 1 582
2 HCL026c01_r AV641012 3 423




Chlamydomonas reinhardtii
Kazusa DNA Research Institute