Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001523A_C01 KCC001523A_c01
(950 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB01044.1| contains similarity to diaminopimelate decarboxy... 236 1e-76
ref|NP_188056.1| diaminopimelate decarboxylase -related [Arabido... 236 1e-76
ref|NP_568252.1| diaminopimelate decarboxylase - like protein [A... 236 6e-76
pir||T48547 diaminopimelate decarboxylase-like protein - Arabido... 224 3e-72
ref|NP_104596.1| diaminopimelate decarboxylase [Mesorhizobium lo... 125 1e-38
>dbj|BAB01044.1| contains similarity to diaminopimelate
decarboxylase~gene_id:MLN21.17 [Arabidopsis thaliana]
Length = 526
Score = 236 bits (603), Expect(2) = 1e-76
Identities = 116/177 (65%), Positives = 144/177 (80%), Gaps = 1/177 (0%)
Frame = +3
Query: 423 GAGAVLVSGNELKLAMKAGFDPKRTILNGNGKLPWELELAAEMGVNINIDSEFDLENIAA 602
G GAVLVSGNEL+LA++AGFDP + I NGNGK +L LAA+ GV +N+DSEFDL NI
Sbjct: 182 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVE 241
Query: 603 AARKTGKKVSVLLRINPDVDPQVHSYVSTGLASSKFGIRNSHIKWFLDEIRKEPL-LELV 779
A+R +GK+V+VLLRINPDVDPQVH YV+TG +SKFGIRN ++WFLD+++ P L+LV
Sbjct: 242 ASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLV 301
Query: 780 GVHSHLGSTITKVNIFRDAAVIMCDFVKMIRAEGFQLKYLNIGGGLGIDYSHQGQVL 950
G H HLGSTITKV+IFRDAAV+M +++ IR +GF++ YLNIGGGLGIDY H G VL
Sbjct: 302 GAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVL 358
Score = 73.6 bits (179), Expect(2) = 1e-76
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = +2
Query: 212 AEDGYLYCDQMRVEDIRNKVPESPFYLYSWNRIAHNYAEYKKALAGLDNLPCYAVKANNN 391
+ DG+LYC+ +VEDI V PFYLYS +I N YK+AL G+ ++ YA+KANNN
Sbjct: 112 SSDGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNN 171
Query: 392 LVIMKQL--AGCG 424
L I++ L GCG
Sbjct: 172 LKILEHLRSLGCG 184
>ref|NP_188056.1| diaminopimelate decarboxylase -related [Arabidopsis thaliana]
gi|15292779|gb|AAK92758.1| putative diaminopimelate
decarboxylase [Arabidopsis thaliana]
gi|18026845|gb|AAL55653.1|AF227913_1 diaminopimelate
decarboxylase [Arabidopsis thaliana]
gi|21594037|gb|AAM65955.1| putative diaminopimelate
decarboxylase [Arabidopsis thaliana]
gi|21689775|gb|AAM67531.1| putative diaminopimelate
decarboxylase [Arabidopsis thaliana]
Length = 484
Score = 236 bits (603), Expect(2) = 1e-76
Identities = 116/177 (65%), Positives = 144/177 (80%), Gaps = 1/177 (0%)
Frame = +3
Query: 423 GAGAVLVSGNELKLAMKAGFDPKRTILNGNGKLPWELELAAEMGVNINIDSEFDLENIAA 602
G GAVLVSGNEL+LA++AGFDP + I NGNGK +L LAA+ GV +N+DSEFDL NI
Sbjct: 140 GCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVE 199
Query: 603 AARKTGKKVSVLLRINPDVDPQVHSYVSTGLASSKFGIRNSHIKWFLDEIRKEPL-LELV 779
A+R +GK+V+VLLRINPDVDPQVH YV+TG +SKFGIRN ++WFLD+++ P L+LV
Sbjct: 200 ASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLV 259
Query: 780 GVHSHLGSTITKVNIFRDAAVIMCDFVKMIRAEGFQLKYLNIGGGLGIDYSHQGQVL 950
G H HLGSTITKV+IFRDAAV+M +++ IR +GF++ YLNIGGGLGIDY H G VL
Sbjct: 260 GAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVL 316
Score = 73.6 bits (179), Expect(2) = 1e-76
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = +2
Query: 212 AEDGYLYCDQMRVEDIRNKVPESPFYLYSWNRIAHNYAEYKKALAGLDNLPCYAVKANNN 391
+ DG+LYC+ +VEDI V PFYLYS +I N YK+AL G+ ++ YA+KANNN
Sbjct: 70 SSDGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNN 129
Query: 392 LVIMKQL--AGCG 424
L I++ L GCG
Sbjct: 130 LKILEHLRSLGCG 142
>ref|NP_568252.1| diaminopimelate decarboxylase - like protein [Arabidopsis thaliana]
gi|15146250|gb|AAK83608.1| AT5g11880/F14F18_50
[Arabidopsis thaliana] gi|22655428|gb|AAM98306.1|
At5g11880/F14F18_50 [Arabidopsis thaliana]
Length = 489
Score = 236 bits (602), Expect(2) = 6e-76
Identities = 117/177 (66%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Frame = +3
Query: 423 GAGAVLVSGNELKLAMKAGFDPKRTILNGNGKLPWELELAAEMGVNINIDSEFDLENIAA 602
G GAVLVSGNEL+LA+ AGFDP + I NGNGK +L LAA+ GV +N+DSEFDL NI
Sbjct: 145 GCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVE 204
Query: 603 AARKTGKKVSVLLRINPDVDPQVHSYVSTGLASSKFGIRNSHIKWFLDEIRKEPL-LELV 779
A+R +GK+V+VLLRINPDVDPQVH YV+TG +SKFGIRN ++WFLDE++ P L+LV
Sbjct: 205 ASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLV 264
Query: 780 GVHSHLGSTITKVNIFRDAAVIMCDFVKMIRAEGFQLKYLNIGGGLGIDYSHQGQVL 950
G H HLGSTITKV+IFRDAAV+M +++ IR +GF++ YLNIGGGLGIDY H G VL
Sbjct: 265 GAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVL 321
Score = 71.6 bits (174), Expect(2) = 6e-76
Identities = 35/73 (47%), Positives = 49/73 (66%), Gaps = 2/73 (2%)
Frame = +2
Query: 212 AEDGYLYCDQMRVEDIRNKVPESPFYLYSWNRIAHNYAEYKKALAGLDNLPCYAVKANNN 391
+ DG+LYC+ +V+DI V + PFYLYS +I N YK+AL G+ ++ YA+KANNN
Sbjct: 75 SSDGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNN 134
Query: 392 LVIMKQL--AGCG 424
L I++ L GCG
Sbjct: 135 LKILEHLRSLGCG 147
>pir||T48547 diaminopimelate decarboxylase-like protein - Arabidopsis thaliana
gi|7573355|emb|CAB87661.1| diaminopimelate
decarboxylase-like protein [Arabidopsis thaliana]
Length = 496
Score = 224 bits (570), Expect(2) = 3e-72
Identities = 116/184 (63%), Positives = 141/184 (76%), Gaps = 8/184 (4%)
Frame = +3
Query: 423 GAGAVLVSGNELKLAMKAGFDP-------KRTILNGNGKLPWELELAAEMGVNINIDSEF 581
G GAVLVSGNEL+LA+ A FD R I NGNGK +L LAA+ GV +N+DSEF
Sbjct: 145 GCGAVLVSGNELRLALLAVFDHVFGVDEMNRCIFNGNGKSLEDLVLAAQEGVFVNVDSEF 204
Query: 582 DLENIAAAARKTGKKVSVLLRINPDVDPQVHSYVSTGLASSKFGIRNSHIKWFLDEIRKE 761
DL NI A+R +GK+V+VLLRINPDVDPQVH YV+TG +SKFGIRN ++WFLDE++
Sbjct: 205 DLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAH 264
Query: 762 PL-LELVGVHSHLGSTITKVNIFRDAAVIMCDFVKMIRAEGFQLKYLNIGGGLGIDYSHQ 938
P L+LVG H HLGSTITKV+IFRDAAV+M +++ IR +GF++ YLNIGGGLGIDY H
Sbjct: 265 PKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHA 324
Query: 939 GQVL 950
G VL
Sbjct: 325 GAVL 328
Score = 71.6 bits (174), Expect(2) = 3e-72
Identities = 35/73 (47%), Positives = 49/73 (66%), Gaps = 2/73 (2%)
Frame = +2
Query: 212 AEDGYLYCDQMRVEDIRNKVPESPFYLYSWNRIAHNYAEYKKALAGLDNLPCYAVKANNN 391
+ DG+LYC+ +V+DI V + PFYLYS +I N YK+AL G+ ++ YA+KANNN
Sbjct: 75 SSDGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNN 134
Query: 392 LVIMKQL--AGCG 424
L I++ L GCG
Sbjct: 135 LKILEHLRSLGCG 147
>ref|NP_104596.1| diaminopimelate decarboxylase [Mesorhizobium loti]
gi|14023777|dbj|BAB50382.1| diaminopimelate
decarboxylase [Mesorhizobium loti]
Length = 422
Score = 125 bits (314), Expect(2) = 1e-38
Identities = 67/170 (39%), Positives = 104/170 (60%), Gaps = 1/170 (0%)
Frame = +3
Query: 423 GAGAVLVSGNELKLAMKAGFDPKRTILNGNGKLPWELELAAEMGVN-INIDSEFDLENIA 599
GAGA +VS EL+ A+ AG + + +G GK E++LA E G+ N++SE +LE ++
Sbjct: 75 GAGADVVSEGELRRALAAGIPASKILFSGVGKTAREIDLALEAGILCFNVESEPELELLS 134
Query: 600 AAARKTGKKVSVLLRINPDVDPQVHSYVSTGLASSKFGIRNSHIKWFLDEIRKEPLLELV 779
A A GK + LRINPDVD + H +STG A +KFGI + P +++
Sbjct: 135 ARAVALGKVAPISLRINPDVDAKTHKKISTGKAENKFGIAWQRARQVYARAATLPGIKVT 194
Query: 780 GVHSHLGSTITKVNIFRDAAVIMCDFVKMIRAEGFQLKYLNIGGGLGIDY 929
G+ +H+GS IT++ F DA ++ D V +RA+G ++++++GGGLGI Y
Sbjct: 195 GIDTHIGSQITELQPFDDAFALLVDLVGALRADGHAIEHVDLGGGLGIPY 244
Score = 57.4 bits (137), Expect(2) = 1e-38
Identities = 28/69 (40%), Positives = 43/69 (61%)
Frame = +2
Query: 218 DGYLYCDQMRVEDIRNKVPESPFYLYSWNRIAHNYAEYKKALAGLDNLPCYAVKANNNLV 397
DG L+ + + + DI +V +PFY YS + +Y + +A AGLD L CYA+KAN+N
Sbjct: 8 DGVLHAEDVAIPDIAAQVG-TPFYCYSTATLTRHYRVFAQAFAGLDALVCYAMKANSNQA 66
Query: 398 IMKQLAGCG 424
+++ LA G
Sbjct: 67 VLRTLARLG 75
