KCC001512A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001512A_C01 KCC001512A_c01
CTTGGCGCATAATTAGACCGCATTCCCCCAACCCACTTCACTTGCACCCGATCGCTTTGC
GGCGGTGCTTCCTCGCTCGCTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTT
CTACAGCAGGGGAACCGCCTCGCCATCCGTTGGCACGACCTGCACCCGGGCAACGACGCC
CCGAACTTCGTGTCCTGCGTGATTGAAATCCCTCGCGGTTCCAAGGTCAAGTATGAGCTG
GACAAGGACACCGGTCTGTGCTTCGTGGACCGCATCCTGTACTCGTCGGTGGTCTACCCC
CACAATTACGGCTTTGTGCCGAAGACTCTGTGCGAGGACGGCGACCCGCTGGGACGTGCT
GGTGCTGATGCAGGAGCCTGTTGTGCCTATGTGCTTCCTGCGGGCCAAGCCCATCGGTGT
CATGCAGATGCTTGACCAGGGCGAGCGCGACGACAAGCTGATTGCCGTTCACGCCGACGA
CCCGGAGTACAAGGGCTTCACCGACATCAGCCAGCTGCCTCCTCACCGCCTGGCCGAGAT
CAAGCGGTTCTTCGAGGACTACAAGAAGAACGAGCACAAGGAGGTGGTCGTGGACGACTT
CCTGGGTGCTGAGGAGGCCAAGAAGGTGGTCAAGGACTCGCTGAACATGTACCAGGAGCA
CTACGTGCCCCGCAAGCTGCGCAACGTGTACGAGTAAAGTATCGATGCGGATGCGCCCGG
GCTTATGGAGTTTCAGGAGCTCATGAGACGGCACGCGCGCGCCTCCTGGACGGGACAGGC
TCGCGGTTGCCTTTGACGCCGCTTGCAGCCATGCTCTCTTGGACCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001512A_C01 KCC001512A_c01
         (826 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC42763.1| soluble inorganic pyrophosphatase [Chlamydomonas...   234  3e-99
gb|AAM65537.1| inorganic pyrophosphatase-like protein [Arabidops...   152  1e-63
ref|NP_190930.1| inorganic pyrophosphatase -related protein [Ara...   151  2e-63
ref|NP_171613.1| soluble inorganic pyrophosphatase -related [Ara...   150  3e-61
sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase (Pyrophos...   151  3e-61

>emb|CAC42763.1| soluble inorganic pyrophosphatase [Chlamydomonas reinhardtii]
          Length = 192

 Score =  234 bits (598), Expect(2) = 3e-99
 Identities = 114/114 (100%), Positives = 114/114 (100%)
 Frame = +2

Query: 353 DVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRL 532
           DVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRL
Sbjct: 79  DVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRL 138

Query: 533 AEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYVPRKLRNVYE 694
           AEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYVPRKLRNVYE
Sbjct: 139 AEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYVPRKLRNVYE 192

 Score =  150 bits (379), Expect(2) = 3e-99
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +1

Query: 151 WHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCFVDRILYSSVVYPHNYGFVPKTL 330
           WHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCFVDRILYSSVVYPHNYGFVPKTL
Sbjct: 12  WHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCFVDRILYSSVVYPHNYGFVPKTL 71

Query: 331 CEDGDPL 351
           CEDGDPL
Sbjct: 72  CEDGDPL 78

>gb|AAM65537.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana]
          Length = 216

 Score =  152 bits (383), Expect(2) = 1e-63
 Identities = 73/110 (66%), Positives = 91/110 (82%)
 Frame = +2

Query: 353 DVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRL 532
           DVLV+MQEPV+P CFLRAK IG+M M+DQGE+DDK+IAV ADDPEY+ + DIS+LPPHR+
Sbjct: 107 DVLVIMQEPVIPACFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELPPHRM 166

Query: 533 AEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYVPRKLR 682
           AEI+RFFEDYKKNE+KEV V+DFL A  A   V+ S+++Y + YV   LR
Sbjct: 167 AEIRRFFEDYKKNENKEVAVNDFLPATAAYDAVQHSMDLYAD-YVVENLR 215

 Score =  114 bits (285), Expect(2) = 1e-63
 Identities = 56/89 (62%), Positives = 66/89 (73%), Gaps = 2/89 (2%)
 Frame = +1

Query: 91  SLPTRLKDVLLQQGNR--LAIRWHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCF 264
           SLPT  + +L    +R   A  WHDL  G +AP   +CV+EI +GSKVKYELDK TGL  
Sbjct: 18  SLPTLNERILSSMSHRSVAAHPWHDLEIGPEAPIIFNCVVEIGKGSKVKYELDKTTGLIK 77

Query: 265 VDRILYSSVVYPHNYGFVPKTLCEDGDPL 351
           VDRILYSSVVYPHNYGF+P+TLCED DP+
Sbjct: 78  VDRILYSSVVYPHNYGFIPRTLCEDSDPI 106

>ref|NP_190930.1| inorganic pyrophosphatase -related protein [Arabidopsis thaliana]
           gi|11266401|pir||T45902 inorganic pyrophosphatase-like
           protein - Arabidopsis thaliana
           gi|6729513|emb|CAB67669.1| inorganic
           pyrophosphatase-like protein [Arabidopsis thaliana]
          Length = 216

 Score =  151 bits (381), Expect(2) = 2e-63
 Identities = 73/110 (66%), Positives = 91/110 (82%)
 Frame = +2

Query: 353 DVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRL 532
           DVLV+MQEPV+P CFLRAK IG+M M+DQGE+DDK+IAV ADDPEY+ + DIS+LPPHR+
Sbjct: 107 DVLVIMQEPVIPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELPPHRM 166

Query: 533 AEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYVPRKLR 682
           AEI+RFFEDYKKNE+KEV V+DFL A  A   V+ S+++Y + YV   LR
Sbjct: 167 AEIRRFFEDYKKNENKEVAVNDFLPATAAYDAVQHSMDLYAD-YVVENLR 215

 Score =  114 bits (285), Expect(2) = 2e-63
 Identities = 56/89 (62%), Positives = 66/89 (73%), Gaps = 2/89 (2%)
 Frame = +1

Query: 91  SLPTRLKDVLLQQGNR--LAIRWHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCF 264
           SLPT  + +L    +R   A  WHDL  G +AP   +CV+EI +GSKVKYELDK TGL  
Sbjct: 18  SLPTLNERILSSMSHRSVAAHPWHDLEIGPEAPIIFNCVVEIGKGSKVKYELDKTTGLIK 77

Query: 265 VDRILYSSVVYPHNYGFVPKTLCEDGDPL 351
           VDRILYSSVVYPHNYGF+P+TLCED DP+
Sbjct: 78  VDRILYSSVVYPHNYGFIPRTLCEDSDPI 106

>ref|NP_171613.1| soluble inorganic pyrophosphatase -related [Arabidopsis thaliana]
           gi|15450699|gb|AAK96621.1| At1g01050/T25K16_5
           [Arabidopsis thaliana] gi|16323129|gb|AAL15299.1|
           At1g01050/T25K16_5 [Arabidopsis thaliana]
           gi|17473935|gb|AAL38377.1| putative inorganic
           pyrophosphatase [Arabidopsis thaliana]
           gi|20148453|gb|AAM10117.1| putative inorganic
           pyrophosphatase [Arabidopsis thaliana]
           gi|21537232|gb|AAM61573.1| soluble inorganic
           pyrophosphatase, putative [Arabidopsis thaliana]
           gi|24797046|gb|AAN64535.1| At1g01050/T25K16_5
           [Arabidopsis thaliana]
          Length = 212

 Score =  150 bits (378), Expect(2) = 3e-61
 Identities = 71/110 (64%), Positives = 92/110 (83%)
 Frame = +2

Query: 353 DVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRL 532
           DVLV+MQEPV+P CFLRA+ IG+M M+DQGE+DDK+IAV  DDPEYK +TDI +LPPHRL
Sbjct: 103 DVLVIMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRL 162

Query: 533 AEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYVPRKLR 682
           +EI+RFFEDYKKNE+KEV V+DFL +E A + ++ S+++Y E Y+   LR
Sbjct: 163 SEIRRFFEDYKKNENKEVAVNDFLPSESAVEAIQYSMDLYAE-YILHTLR 211

 Score =  108 bits (270), Expect(2) = 3e-61
 Identities = 53/86 (61%), Positives = 63/86 (72%), Gaps = 3/86 (3%)
 Frame = +1

Query: 103 RLKDVLLQQGNRLAIR---WHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCFVDR 273
           RL + +L   +R ++    WHDL  G  AP   + V+EI +GSKVKYELDK TGL  VDR
Sbjct: 17  RLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSKVKYELDKKTGLIKVDR 76

Query: 274 ILYSSVVYPHNYGFVPKTLCEDGDPL 351
           ILYSSVVYPHNYGFVP+TLCED DP+
Sbjct: 77  ILYSSVVYPHNYGFVPRTLCEDNDPI 102

>sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase)
           (PPase) gi|7436030|pir||T07594 probable inorganic
           diphosphatase (EC 3.6.1.1), soluble PPA - potato
           gi|534916|emb|CAA85362.1| soluble inorganic
           pyrophosphatase [Solanum tuberosum]
          Length = 211

 Score =  151 bits (382), Expect(2) = 3e-61
 Identities = 73/110 (66%), Positives = 90/110 (81%)
 Frame = +2

Query: 353 DVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADDPEYKGFTDISQLPPHRL 532
           DVLVLMQEPV+P CFLRA+ IG+M M+DQGE+DDK+IAV ADDPEY+ +TDI QLPPHRL
Sbjct: 102 DVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKQLPPHRL 161

Query: 533 AEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYVPRKLR 682
           AEI+RFFEDYKKNE+K+V VDDFL    A   ++ S+++Y E Y+   LR
Sbjct: 162 AEIRRFFEDYKKNENKDVAVDDFLPPNSAVNAIQYSMDLYAE-YILHSLR 210

 Score =  106 bits (265), Expect(2) = 3e-61
 Identities = 52/86 (60%), Positives = 64/86 (73%), Gaps = 3/86 (3%)
 Frame = +1

Query: 103 RLKDVLLQQGNRLAIR---WHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCFVDR 273
           RL + +L   +R ++    WHDL  G +AP+  + VIEI +GSKVKYELDK TGL  VDR
Sbjct: 16  RLNERILSSISRRSVAAHPWHDLEIGPEAPSVFNVVIEISKGSKVKYELDKKTGLIKVDR 75

Query: 274 ILYSSVVYPHNYGFVPKTLCEDGDPL 351
           ILYSSVVYP NYGF+P+TLCED DP+
Sbjct: 76  ILYSSVVYPQNYGFIPRTLCEDNDPM 101



EST assemble image


clone accession position
1 HC016b07_r AV633056 1 611
2 HC090d06_r AV638757 6 546
3 MX040c04_r BP087649 83 457
4 LC063e08_r AV623420 84 591
5 MX041a04_r BP087668 87 424
6 HC069a02_r AV637118 89 596
7 LC039a02_r AV621644 89 441
8 MX059a01_r BP088378 91 296
9 MX016h06_r BP086792 93 548
10 MX016f02_r BP086777 93 484
11 HC021c09_r AV633480 93 547
12 HC071h06_r AV637342 94 455
13 HC023a01_r AV633611 96 606
14 MX259a03_r BP092777 97 598
15 MX036c11_r BP087519 97 459
16 MX040b05_r BP087644 97 546
17 LC100e03_r AV625969 98 492
18 LC088h05_r AV625175 102 567
19 HC092d10_r AV638907 104 501
20 MX053g03_r BP088192 105 456
21 HC082g05_r AV638166 109 625
22 HC023b05_r AV633626 111 602
23 HC028a04_r AV634004 111 601
24 HC079c09_r AV637913 112 545
25 HC079b07_r AV637904 112 549
26 HC097d07_r AV639287 112 615
27 HC069a05_r AV637121 121 596
28 HC054h04_r AV636075 123 567
29 HC076a02_r AV637666 193 549
30 CM057h07_r AV390440 375 993




Chlamydomonas reinhardtii
Kazusa DNA Research Institute