KCC001511A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001511A_C01 KCC001511A_c01
CTCGCTAGGAACATAATGCAGCTTACTCGCACTCAGGTTTCTCGCTCGGGCGTCCGCCCC
ACCCGCGCGTCTCGCCGGGTGCTGGTCGCCAAGGGCCGCCAAGACTGCCAATGGCCCTCG
CGTCGCTATCGTCGGCATTACTGGCGCTGTCGGCCAGGAGTTTCTGACGGTCGCTGACGG
AGCGTAACTTCCCTTACAGCTCTATGAAGATGCTGGCCTCTGGCCCGGTCTGCTGGCAAG
AAGCAGGAGTTCGAGGGCGTCAGCTACACCATTGAGGAGCTGACGGAGAACAGCTTCAAC
GATGTGGACATTGCTTTGTTCAGCGCTGGTGGCTCCATCAGCAAGAAGCTGGGCCCCATT
GCCGCCAAGGCTGGCGCCATCGTGGTGGACAACTCGTCTGCTTTCCGCATGACTGAGGGC
GTGCCCCTGGTCATTCCCGAGGTCAACCCCGAGGCCATGTCGCATATCAAGGTCGGCAAG
GGCGGCGCCATCATCGCCAACCCCAATTGCTCCACCATCATCGCGCTGATGGCCGTGACC
CCCCTGGACCGCGTCGCGAACGTGAAGCGCATGTGTGTTTCCACCTACCAGGCCGCCTCG
GGCGCCGGTGCTGCCGCCATGGAGGAGCTGCGCCAGCAGACTCGCGATGTGCTGGACGGC
AAGCCCGCGCAGCCCAAGATCTTCCCCCAGCAGTACGCGTTCAACCTGTTCTCGCACAAC
AGCGGCATGGACGTGGCTCTGGGCTACAACGAGGAGGAGATGAAGCTGGTGAAGGAGACC
CGCAAGATCTGGAACAACCCCGGGATCCGCATCACCGCCACCTGCGTGCGCGTGCCCGTC
ATGCGCGCCCACGCCGAGTCCATCAACCTGGAGTTCGAGAAGGACATCTCCGAGGCGCAA
GCGCTGGAGGCGCTGGCGGCCTTCCCCGGCGTGTCCATCATTAACGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001511A_C01 KCC001511A_c01
         (947 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAG33078.1|AF207064_1 aspartate-semialdehyde dehydrogenase pr...   333  4e-96
ref|NP_172934.1| aspartate-semialdehyde dehydrogenase -related [...   333  7e-94
pir||B86282 protein F10B6.22 [imported] - Arabidopsis thaliana g...   316  7e-89
gb|AAK63930.1|AC084282_11 putative dehydrogenase precursor [Oryz...   304  3e-86
ref|NP_771327.1| aspartate-semialdehyde dehydrogenase [Bradyrhiz...   263  9e-73

>gb|AAG33078.1|AF207064_1 aspartate-semialdehyde dehydrogenase precursor [Arabidopsis
           thaliana]
          Length = 340

 Score =  333 bits (853), Expect(3) = 4e-96
 Identities = 175/241 (72%), Positives = 198/241 (81%), Gaps = 1/241 (0%)
 Frame = +1

Query: 226 RSAGKKQEFEGVSYTIEELTENSFNDVDIALFSAGGSISKKLGPIAAKAGAIVVDNSSAF 405
           RSAGK+  F+G  YT+EELT +SFN VDIALFSAGGSISK+ GP+AA+ G IVVDNSSAF
Sbjct: 40  RSAGKRVAFDGHEYTVEELTADSFNGVDIALFSAGGSISKEFGPLAAEKGTIVVDNSSAF 99

Query: 406 RMTEGVPLVIPEVNPEAMSHIKVGKG-GAIIANPNCSTIIALMAVTPLDRVANVKRMCVS 582
           RM +GVPLVIPEVNPEAM  IKVG G GA+IANPNCSTII LMAVTPL   A VKRM VS
Sbjct: 100 RMVDGVPLVIPEVNPEAMKGIKVGMGKGALIANPNCSTIICLMAVTPLHHHAKVKRMVVS 159

Query: 583 TYQAASGAGAAAMEELRQQTRDVLDGKPAQPKIFPQQYAFNLFSHNSGMDVALGYNEEEM 762
           TYQAASGAGAAAMEEL QQTR+VL+GKP    IF QQYAFNLFSHN+ + +  GYNEEEM
Sbjct: 160 TYQAASGAGAAAMEELVQQTREVLEGKPPTCNIFGQQYAFNLFSHNAPI-LDNGYNEEEM 218

Query: 763 KLVKETRKIWNNPGIRITATCVRVPVMRAHAESINLEFEKDISEAQALEALAAFPGVSII 942
           KLVKETRKIWN+  +++TATC+RVPVMRAHAES+NL+FE  + E  A E L   PGV II
Sbjct: 219 KLVKETRKIWNDTEVKVTATCIRVPVMRAHAESVNLQFENPLDENTAREILKKAPGVYII 278

Query: 943 N 945
           +
Sbjct: 279 D 279

 Score = 34.7 bits (78), Expect(3) = 4e-96
 Identities = 14/21 (66%), Positives = 19/21 (89%)
 Frame = +2

Query: 110 NGPRVAIVGITGAVGQEFLTV 172
           + P +A+VG+TGAVGQEFL+V
Sbjct: 2   SAPSLAVVGVTGAVGQEFLSV 22

 Score = 29.3 bits (64), Expect(3) = 4e-96
 Identities = 12/16 (75%), Positives = 16/16 (100%)
 Frame = +3

Query: 174 LTERNFPYSSMKMLAS 221
           L++R+FPYSS+KMLAS
Sbjct: 23  LSDRDFPYSSIKMLAS 38

>ref|NP_172934.1| aspartate-semialdehyde dehydrogenase -related [Arabidopsis
           thaliana] gi|17979524|gb|AAL50097.1| At1g14810/F10B6_6
           [Arabidopsis thaliana] gi|20856224|gb|AAM26654.1|
           At1g14810/F10B6_6 [Arabidopsis thaliana]
           gi|21536731|gb|AAM61063.1| aspartate-semialdehyde
           dehydrogenase, putative [Arabidopsis thaliana]
          Length = 375

 Score =  333 bits (853), Expect(2) = 7e-94
 Identities = 175/241 (72%), Positives = 198/241 (81%), Gaps = 1/241 (0%)
 Frame = +1

Query: 226 RSAGKKQEFEGVSYTIEELTENSFNDVDIALFSAGGSISKKLGPIAAKAGAIVVDNSSAF 405
           RSAGK+  F+G  YT+EELT +SFN VDIALFSAGGSISK+ GP+AA+ G IVVDNSSAF
Sbjct: 75  RSAGKRVAFDGHEYTVEELTADSFNGVDIALFSAGGSISKEFGPLAAEKGTIVVDNSSAF 134

Query: 406 RMTEGVPLVIPEVNPEAMSHIKVGKG-GAIIANPNCSTIIALMAVTPLDRVANVKRMCVS 582
           RM +GVPLVIPEVNPEAM  IKVG G GA+IANPNCSTII LMAVTPL   A VKRM VS
Sbjct: 135 RMVDGVPLVIPEVNPEAMKGIKVGMGKGALIANPNCSTIICLMAVTPLHHHAKVKRMVVS 194

Query: 583 TYQAASGAGAAAMEELRQQTRDVLDGKPAQPKIFPQQYAFNLFSHNSGMDVALGYNEEEM 762
           TYQAASGAGAAAMEEL QQTR+VL+GKP    IF QQYAFNLFSHN+ + +  GYNEEEM
Sbjct: 195 TYQAASGAGAAAMEELVQQTREVLEGKPPTCNIFGQQYAFNLFSHNAPI-LDNGYNEEEM 253

Query: 763 KLVKETRKIWNNPGIRITATCVRVPVMRAHAESINLEFEKDISEAQALEALAAFPGVSII 942
           KLVKETRKIWN+  +++TATC+RVPVMRAHAES+NL+FE  + E  A E L   PGV II
Sbjct: 254 KLVKETRKIWNDTEVKVTATCIRVPVMRAHAESVNLQFENPLDENTAREILKKAPGVYII 313

Query: 943 N 945
           +
Sbjct: 314 D 314

 Score = 34.7 bits (78), Expect(2) = 7e-94
 Identities = 14/21 (66%), Positives = 19/21 (89%)
 Frame = +2

Query: 110 NGPRVAIVGITGAVGQEFLTV 172
           + P +A+VG+TGAVGQEFL+V
Sbjct: 37  SAPSLAVVGVTGAVGQEFLSV 57

>pir||B86282 protein F10B6.22 [imported] - Arabidopsis thaliana
            gi|8778230|gb|AAF79239.1|AC006917_24 F10B6.22
            [Arabidopsis thaliana]
          Length = 730

 Score =  316 bits (810), Expect(2) = 7e-89
 Identities = 175/273 (64%), Positives = 198/273 (72%), Gaps = 33/273 (12%)
 Frame = +1

Query: 226  RSAGKKQEFEGVSYTIEELTENSFNDVDIALFSAGGSISKKLGPIAAKAGAIVVDNSSAF 405
            RSAGK+  F+G  YT+EELT +SFN VDIALFSAGGSISK+ GP+AA+ G IVVDNSSAF
Sbjct: 398  RSAGKRVAFDGHEYTVEELTADSFNGVDIALFSAGGSISKEFGPLAAEKGTIVVDNSSAF 457

Query: 406  RMTEGVPLVIPEVNPEAMSHIKVGKG-GAIIANPNCSTIIALMAVTPLDRVANVKRMCVS 582
            RM +GVPLVIPEVNPEAM  IKVG G GA+IANPNCSTII LMAVTPL   A VKRM VS
Sbjct: 458  RMVDGVPLVIPEVNPEAMKGIKVGMGKGALIANPNCSTIICLMAVTPLHHHAKVKRMVVS 517

Query: 583  TYQAASGAGAAAMEELRQQTRDVLDGKPAQPKIFPQQYAFNLFSHNSGMDVALGYNEEEM 762
            TYQAASGAGAAAMEEL QQTR+VL+GKP    IF QQYAFNLFSHN+ + +  GYNEEEM
Sbjct: 518  TYQAASGAGAAAMEELVQQTREVLEGKPPTCNIFGQQYAFNLFSHNAPI-LDNGYNEEEM 576

Query: 763  KLVKETRKIW--------------------------------NNPGIRITATCVRVPVMR 846
            KLVKETRKIW                                N+  +++TATC+RVPVMR
Sbjct: 577  KLVKETRKIWVSGYLSAILCSFHFDLLFKNFRYLTPISCPSQNDTEVKVTATCIRVPVMR 636

Query: 847  AHAESINLEFEKDISEAQALEALAAFPGVSIIN 945
            AHAES+NL+FE  + E  A E L   PGV II+
Sbjct: 637  AHAESVNLQFENPLDENTAREILKKAPGVYIID 669

 Score = 34.7 bits (78), Expect(2) = 7e-89
 Identities = 14/21 (66%), Positives = 19/21 (89%)
 Frame = +2

Query: 110 NGPRVAIVGITGAVGQEFLTV 172
           + P +A+VG+TGAVGQEFL+V
Sbjct: 360 SAPSLAVVGVTGAVGQEFLSV 380

>gb|AAK63930.1|AC084282_11 putative dehydrogenase precursor [Oryza sativa (japonica
           cultivar-group)]
          Length = 375

 Score =  304 bits (778), Expect(2) = 3e-86
 Identities = 159/241 (65%), Positives = 191/241 (78%), Gaps = 1/241 (0%)
 Frame = +1

Query: 226 RSAGKKQEFEGVSYTIEELTE-NSFNDVDIALFSAGGSISKKLGPIAAKAGAIVVDNSSA 402
           RSAGK+  FEG  YT+++L    +F+ VDIALFSAGG +S+   P A  +GA+VVDNSSA
Sbjct: 75  RSAGKRLPFEGQEYTVQDLAAPGAFDGVDIALFSAGGGVSRAHAPAAVASGAVVVDNSSA 134

Query: 403 FRMTEGVPLVIPEVNPEAMSHIKVGKGGAIIANPNCSTIIALMAVTPLDRVANVKRMCVS 582
           FRM   VPLVIPEVNPEAM+H+++GKG AI+ANPNCSTII LMA TPL R A V RM VS
Sbjct: 135 FRMDPEVPLVIPEVNPEAMAHVRLGKG-AIVANPNCSTIICLMAATPLHRHAKVVRMVVS 193

Query: 583 TYQAASGAGAAAMEELRQQTRDVLDGKPAQPKIFPQQYAFNLFSHNSGMDVALGYNEEEM 762
           TYQAASGAGAAAMEEL+ QT++VL GK     IF QQYAFN+FSHN+ + V  GYNEEEM
Sbjct: 194 TYQAASGAGAAAMEELKLQTQEVLAGKAPTCNIFSQQYAFNIFSHNAPI-VENGYNEEEM 252

Query: 763 KLVKETRKIWNNPGIRITATCVRVPVMRAHAESINLEFEKDISEAQALEALAAFPGVSII 942
           K+VKETRKIWN+  +++TATC+RVPVMRAHAES+NL+FEK + E  A E L A  GV+II
Sbjct: 253 KMVKETRKIWNDKDVKVTATCIRVPVMRAHAESVNLQFEKPLDEDTAREILRAAEGVTII 312

Query: 943 N 945
           +
Sbjct: 313 D 313

 Score = 38.1 bits (87), Expect(2) = 3e-86
 Identities = 20/34 (58%), Positives = 21/34 (60%)
 Frame = +2

Query: 92  RAAKTANGPRVAIVGITGAVGQEFLTVADGA*LP 193
           R A   +GP VAIVG TGAVGQEFL V      P
Sbjct: 31  RMALREDGPSVAIVGATGAVGQEFLRVISSRGFP 64

>ref|NP_771327.1| aspartate-semialdehyde dehydrogenase [Bradyrhizobium japonicum]
           gi|27352951|dbj|BAC49952.1| aspartate-semialdehyde
           dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 345

 Score =  263 bits (671), Expect(2) = 9e-73
 Identities = 139/241 (57%), Positives = 173/241 (71%)
 Frame = +1

Query: 223 ARSAGKKQEFEGVSYTIEELTENSFNDVDIALFSAGGSISKKLGPIAAKAGAIVVDNSSA 402
           ARSAGK   F G +  IEELTE +F  VDIALFSAGGSISKK  P+A KAGA+VVDNSSA
Sbjct: 44  ARSAGKTVSFRGQNVVIEELTERAFEGVDIALFSAGGSISKKYAPLAVKAGAVVVDNSSA 103

Query: 403 FRMTEGVPLVIPEVNPEAMSHIKVGKGGAIIANPNCSTIIALMAVTPLDRVANVKRMCVS 582
           FRM   VPLVIPE+N    + I+  KG  IIANPNC+ I AL+ + P+ +   +KR+ +S
Sbjct: 104 FRMDPNVPLVIPEINA---NRIRDHKG--IIANPNCAAITALVPLWPIHQKNRIKRVIIS 158

Query: 583 TYQAASGAGAAAMEELRQQTRDVLDGKPAQPKIFPQQYAFNLFSHNSGMDVALGYNEEEM 762
           TYQAASGAGAAAMEEL + TR  L+G+   P++ P  YAFNLF+HN+ +D   GYN+EE 
Sbjct: 159 TYQAASGAGAAAMEELVESTRANLNGQVYTPRVMPHPYAFNLFNHNTAVDPETGYNDEET 218

Query: 763 KLVKETRKIWNNPGIRITATCVRVPVMRAHAESINLEFEKDISEAQALEALAAFPGVSII 942
           K++KETRKI+ +  I +  TCVRVPV+RAH E+I  E EK ISE Q    +A  PGV I+
Sbjct: 219 KVIKETRKIFEDETIAVGVTCVRVPVLRAHCEAITFECEKPISEDQVRAIMAQAPGVKIV 278

Query: 943 N 945
           +
Sbjct: 279 D 279

 Score = 34.3 bits (77), Expect(2) = 9e-73
 Identities = 15/24 (62%), Positives = 18/24 (74%)
 Frame = +2

Query: 107 ANGPRVAIVGITGAVGQEFLTVAD 178
           +N P VAIVG+TGAVG EF+   D
Sbjct: 6   SNDPVVAIVGVTGAVGAEFIATMD 29



EST assemble image


clone accession position
1 HC015f07_r AV633016 1 603
2 MX236h01_r BP091315 86 386
3 HC090c02_r AV638741 97 536
4 LC080a02_r AV624599 98 611
5 MX036c10_r BP087518 98 489
6 LC035b10_r AV621377 98 632
7 MX255c04_r BP092516 99 580
8 LC092g09_r AV625452 100 485
9 HC084d05_r AV638285 102 623
10 MX047h11_r BP087960 102 575
11 HC049b04_r AV635652 104 645
12 LC006h08_r AV619337 105 666
13 MX005d11_r BP086270 107 404
14 MX232f12_r BP091029 107 355
15 HC034f12_r AV634537 107 582
16 MX226e09_r BP090618 107 461
17 MXL021d03_r BP094330 107 484
18 MX042a11_r BP087714 107 492
19 MX064e09_r BP088595 107 543
20 HC004h06_r AV632175 107 642
21 CM057c09_r AV390475 108 725
22 HC055a03_r AV636086 110 589
23 HC098b03_r AV639339 113 544
24 HC050g04_r AV635775 114 605
25 MX212a02_r BP089675 117 321
26 HC023g02_r AV633666 117 580
27 HC071c06_r AV637295 117 579
28 HC026g02_r AV633902 118 714
29 HC045f01_r AV635376 122 672
30 HC079f04_r AV637937 125 617
31 HC048f08_r AV635622 134 559
32 HC049c02_r AV635660 147 555
33 MX258b03_r BP092714 198 793
34 MX251a08_r BP092205 228 713
35 MX205c04_r BP089329 292 657
36 HC053d12_r AV635968 317 748
37 HC007a10_r AV632349 375 774
38 HC001a04_r AV631865 391 883
39 LC053b01_r AV622690 559 1085
40 LCL044e11_r AV628616 577 873




Chlamydomonas reinhardtii
Kazusa DNA Research Institute