KCC001508A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001508A_C01 KCC001508A_c01
gtaacTCAATACATACTGTTACTTTGAGCACTGGTGCTTCTCGTTCGGGGACGCTAGCTG
TTTGGAGCGCTGACTTTCAAGGTCTGCGCTTGGCTCATCGCCCAACACCAACATTTATGA
AGGATATTGAACAAGCGGTCGCCGCGATCCTAGAGAAGCAGAAGAAGCAGCCGGACGGGC
TTGTGTCCCTTATCCTTGACTCTACGTGCAAGGCTACTCACGTCAAGGGCTTGGACGCGT
TCGTAAACCTCAAGACGCTATCGCTCTGCAGCCTTGGACTGACCTCGCTCGAGGGATTCC
CAAAGCTTCCCAAGCTTGAGCGCCTCATTCTCACTGATAACCGCATCACAGGCGGTCTCC
AACACCTGGTAGACGCCGGCCTCACCAGCCTGCGCATCCTAGAGCTAGCCAACAACCGCA
TCTCGCGCGTCGAGGAGCTCGAGTCGCTCAAGGGCCTGACATCGCTGCAGAGCCTTGACG
TGGACGCGTGCCCGCTAGCCACCAAGCCGGACTTCGACCCCAAGAAGGTCTTCACAATGC
TGAAGGAGCTCAAGTACCTGAACGGCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001508A_C01 KCC001508A_c01
         (568 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC84847.1| acidic nuclear phosphoprotein-like protein [Oryz...   102  5e-21
gb|AAQ20840.1| mapmodulin-like protein [Rhodnius prolixus]            100  1e-20
ref|XP_313950.1| ENSANGP00000009956 [Anopheles gambiae] gi|21297...    97  1e-19
ref|NP_570959.1| acidic nuclear phosphoprotein 32 family, member...    97  1e-19
ref|NP_190638.1| leucine rich repeat protein-related [Arabidopsi...    97  2e-19

>dbj|BAC84847.1| acidic nuclear phosphoprotein-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 476

 Score =  102 bits (253), Expect = 5e-21
 Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 6/151 (3%)
 Frame = +3

Query: 129 EQAVAAILEKQKKQPDGLV-SLILDSTCKATH-----VKGLDAFVNLKTLSLCSLGLTSL 290
           E+AV A L+   +       SL LD   K  H      + L+ + +L+ LS+  +G+ SL
Sbjct: 6   ERAVEAALQAAGEGSSSPARSLTLDGAVKCLHGRLPAAEILERYQSLEHLSIAGVGVASL 65

Query: 291 EGFPKLPKLERLILTDNRITGGLQHLVDAGLTSLRILELANNRISRVEELESLKGLTSLQ 470
            GFP+L  L RL L+DNRI GGL HLV AGL SLR L+L+NNRI  V +L  L  L  L 
Sbjct: 66  AGFPRLRNLTRLTLSDNRIAGGLDHLVAAGLASLRDLDLSNNRIQDVGDLSPLANL-RLV 124

Query: 471 SLDVDACPLATKPDFDPKKVFTMLKELKYLN 563
           SLD+  CP+    D+   KVF M++ LKYL+
Sbjct: 125 SLDLYECPVTRVKDY-RSKVFGMIRTLKYLD 154

>gb|AAQ20840.1| mapmodulin-like protein [Rhodnius prolixus]
          Length = 243

 Score =  100 bits (249), Expect = 1e-20
 Identities = 64/140 (45%), Positives = 93/140 (65%), Gaps = 1/140 (0%)
 Frame = +3

Query: 150 LEKQKKQPDGLVSLILDSTCKATHVKGL-DAFVNLKTLSLCSLGLTSLEGFPKLPKLERL 326
           LEK+ ++PD +  L LD+ C++T ++GL D F NLK+LSL ++GLTSL+GFPKLP L++L
Sbjct: 7   LEKRGRKPDQIYELNLDN-CRSTTIEGLTDDFTNLKSLSLINVGLTSLKGFPKLPNLQKL 65

Query: 327 ILTDNRITGGLQHLVDAGLTSLRILELANNRISRVEELESLKGLTSLQSLDVDACPLATK 506
            L+DNRI+ GL  L  +    L  L L+ N+I  ++ LE LK    L+SLD+    + T 
Sbjct: 66  ELSDNRISNGLNLLHTS--PKLTNLNLSGNKIKDLDTLEPLKEFEHLKSLDLFNNEV-TV 122

Query: 507 PDFDPKKVFTMLKELKYLNG 566
            D   +K+F +L  LKYL+G
Sbjct: 123 IDNYREKLFKLLPSLKYLDG 142

>ref|XP_313950.1| ENSANGP00000009956 [Anopheles gambiae] gi|21297297|gb|EAA09442.1|
           ENSANGP00000009956 [Anopheles gambiae str. PEST]
          Length = 235

 Score = 97.4 bits (241), Expect = 1e-19
 Identities = 59/141 (41%), Positives = 90/141 (62%), Gaps = 1/141 (0%)
 Frame = +3

Query: 147 ILEKQKKQPDGLVSLILDSTCKATHVKGL-DAFVNLKTLSLCSLGLTSLEGFPKLPKLER 323
           +LEK+ +  D +  LILD+ C++T++ GL D+F  L+TLSL ++GL SL+ FPKL  L +
Sbjct: 18  LLEKRGRPDDEITELILDN-CRSTYIDGLTDSFTALETLSLINVGLVSLKNFPKLSNLRK 76

Query: 324 LILTDNRITGGLQHLVDAGLTSLRILELANNRISRVEELESLKGLTSLQSLDVDACPLAT 503
           L L+DNRI+ GL HL   G   L  L L+ NRI   +EL+ LK L +L+ LD+    +  
Sbjct: 77  LELSDNRISNGLNHL--TGSPKLTHLNLSGNRIKDFDELQPLKDLENLEVLDLFNNQVTL 134

Query: 504 KPDFDPKKVFTMLKELKYLNG 566
             ++  +K+F ++  L YL+G
Sbjct: 135 IENY-REKLFQLIPSLNYLDG 154

>ref|NP_570959.1| acidic nuclear phosphoprotein 32 family, member B; proliferation
           related acidic leucine rich protein PAL31; acidic
           protein rich in leucines [Mus musculus]
           gi|9971214|dbj|BAB12436.1| proliferation related acidic
           leucine rich protein PAL31 [Mus musculus]
           gi|13097525|gb|AAH03489.1| Acidic nuclear phosphoprotein
           32 family, member B [Mus musculus]
           gi|13542865|gb|AAH05628.1| Acidic nuclear phosphoprotein
           32 family, member B [Mus musculus]
          Length = 272

 Score = 97.4 bits (241), Expect = 1e-19
 Identities = 62/142 (43%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
 Frame = +3

Query: 150 LEKQKKQPDGLVSLILDSTCKATH--VKGL-DAFVNLKTLSLCSLGLTSLEGFPKLPKLE 320
           LE + + P  +  L+LD+ CKA    ++GL D FVNL+ LSL S+GL S+   PKLPKL+
Sbjct: 9   LELRNRTPAAVRELVLDN-CKAMDGKIEGLTDEFVNLEFLSLISVGLFSVSDLPKLPKLK 67

Query: 321 RLILTDNRITGGLQHLVDAGLTSLRILELANNRISRVEELESLKGLTSLQSLDVDACPLA 500
           +L L++NRI GGL  L +  L SL  L L+ N +  +  LE LK L  L+SLD+  C + 
Sbjct: 68  KLELSENRIFGGLDRLAEE-LPSLTHLNLSGNNLKDISTLEPLKRLDCLKSLDLFGCEVT 126

Query: 501 TKPDFDPKKVFTMLKELKYLNG 566
            + D+  + VF +L +L YL+G
Sbjct: 127 NRSDY-RETVFRLLPQLSYLDG 147

>ref|NP_190638.1| leucine rich repeat protein-related [Arabidopsis thaliana]
           gi|11358337|pir||T46146 hypothetical protein T3A5.70 -
           Arabidopsis thaliana gi|6561972|emb|CAB62438.1| putative
           protein [Arabidopsis thaliana]
          Length = 447

 Score = 97.1 bits (240), Expect = 2e-19
 Identities = 65/150 (43%), Positives = 93/150 (61%), Gaps = 5/150 (3%)
 Frame = +3

Query: 129 EQAVAAILEKQKKQPDGLVSLILDSTCKATHVK-----GLDAFVNLKTLSLCSLGLTSLE 293
           E+AV A L+ Q  +     +L LD   K    +      L+ F NL+ LS+ ++G++SLE
Sbjct: 6   ERAVEAALDGQTDRL-ATRTLTLDGAVKCVQGRLPPPSVLEKFQNLQHLSVANIGVSSLE 64

Query: 294 GFPKLPKLERLILTDNRITGGLQHLVDAGLTSLRILELANNRISRVEELESLKGLTSLQS 473
            FP+L  L++LIL+DNRIT GL+ LV+AGL S   L+L+NNRI  VE+L  L  L  L S
Sbjct: 65  QFPRLGNLQKLILSDNRITVGLEFLVEAGLDSFCDLDLSNNRIQFVEDLAPLAEL-KLVS 123

Query: 474 LDVDACPLATKPDFDPKKVFTMLKELKYLN 563
           LD+  CP+    D+   +VF ++K LKYL+
Sbjct: 124 LDLYECPVTRLKDY-RSRVFGLIKTLKYLD 152



EST assemble image


clone accession position
1 LCL048c08_r AV628873 1 269
2 HC073h11_r AV637505 6 440
3 MX065a05_r BP088614 12 490
4 CM057a08_r AV390421 19 586




Chlamydomonas reinhardtii
Kazusa DNA Research Institute