KCC001496A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001496A_C01 KCC001496A_c01
acgccacgctgcacctgtagtTTAATATCTGGATTGCGAGGAAAGCCCTTGTCACTGCGT
TGAGCTCCCCTACTTACGATCTTTGCGGTTTGCTTCTATTTTAGAAGCATCGCGCTAGCG
GTCCAGCCACCATGAACGAGGAGTATGACGTGATCGTGCTGGGCACGGGTCTGAAGGAGT
GCATCATCAGTGGCCTGCTGTCGGTGGACAAGAAGAAGGTCCTGCATGTGGACCGCAACA
ACTACTACGGTGGCGAGTCCGCGTCGCTCAACCTCATCCAGCTGTTTGAGCGCTTCCGCG
CGGGCGCTGCGCCGCCGCCCAGCCTGGGCCCCTCGCGCGACTACAACGTGGACATGGTGC
CCAAGTTCATGTTGGCCAACGGCAAGCTGGTGCGGGTGCTGCTGCACACCGACGTCGTCA
AGTACCTGGAGTTCAAGGCCGTGGACGGCAGCTATGTGCTTCAGAAGGGCAAGATCCACA
AGGTGCCGGCCAACGACTCGGAGGCTCTGCGCTCGCCGCTGATGGGCCTGTTCGAGAAGC
GCCGCGCGCGCAACTTCTTCCTCTACGTGCAGGACTACGACGAGTCTGACCCCAAGACGC
ACAAGGGCCTGGACCTGAACCGCATGACCATGGCGGAGCTGTACAAGCACTACGACCTGA
CGGAGGACACGCAGGACTTCATCGGCCACGCCCTGGCGCTGCACCGCGATGACGCCTACC
TGACCCAGTCCGCCATGCCCACCGTGCTGCGGATCAAGCTCTACCACGAGTCGCTGTTCA
GGTACGAGGGCCTCAACTCGCCCTACCTGTACCCGCGCTACGGGCTGGGCGAGCTGCCGC
AGGCCTTTGCCCGCCTGAGTGCCGTGTACGGCGGCACCTACATGCTCAACCAGCCGGCGG
TGGAGGTGCTGTACGAGAACGGCGTGGCGGTGGGCATCAAGAACGGAGCCGACGTGGCCC
GCGCCAAGCTGGTGGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001496A_C01 KCC001496A_c01
         (976 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T10801 GDP dissociation inhibitor GDI1 - Volvox carteri f. ...   517  e-145
emb|CAA06731.1| GDP dissociation inhibitor [Cicer arietinum]          396  e-109
pir||T01782 GDP dissociation inhibitor - common tobacco gi|25018...   395  e-109
pir||T02030 GDP dissociation inhibitor protein - rice gi|2384758...   393  e-108
ref|NP_196517.1| GDP dissociation inhibitor [Arabidopsis thalian...   389  e-107

>pir||T10801 GDP dissociation inhibitor GDI1 - Volvox carteri f. nagariensis
           gi|1572518|gb|AAB09058.1| GDP dissociation inhibitor
           protein GDIV1p [Volvox carteri f. nagariensis]
          Length = 443

 Score =  517 bits (1332), Expect = e-145
 Identities = 256/281 (91%), Positives = 266/281 (94%)
 Frame = +3

Query: 132 MNEEYDVIVLGTGLKECIISGLLSVDKKKVLHVDRNNYYGGESASLNLIQLFERFRAGAA 311
           MNEEYDVIVLGTGLKECIISGLLSVDKKKVLHVDRNNYYGGESASL+LIQL+ERFR G  
Sbjct: 1   MNEEYDVIVLGTGLKECIISGLLSVDKKKVLHVDRNNYYGGESASLSLIQLYERFRGGDK 60

Query: 312 PPPSLGPSRDYNVDMVPKFMLANGKLVRVLLHTDVVKYLEFKAVDGSYVLQKGKIHKVPA 491
           PP  LGPSRDYNVDMVPKFM+ANGKLVRVLLHTDVVKYLEFKAVDGSYVLQKGK+HKVPA
Sbjct: 61  PPEKLGPSRDYNVDMVPKFMMANGKLVRVLLHTDVVKYLEFKAVDGSYVLQKGKVHKVPA 120

Query: 492 NDSEALRSPLMGLFEKRRARNFFLYVQDYDESDPKTHKGLDLNRMTMAELYKHYDLTEDT 671
           N SEAL S LMGLFEKRRARNFFLYVQDY+ESDPKTHKGLDL RMTM+ELYK YDL+EDT
Sbjct: 121 NRSEALSSQLMGLFEKRRARNFFLYVQDYEESDPKTHKGLDLKRMTMSELYKQYDLSEDT 180

Query: 672 QDFIGHALALHRDDAYLTQSAMPTVLRIKLYHESLFRYEGLNSPYLYPRYGLGELPQAFA 851
           QDFIGHAL LHRDDAYLTQ A+ TVLRIKLYHESLFRYEGL SPYLYPRYGLGELPQAFA
Sbjct: 181 QDFIGHALGLHRDDAYLTQPALATVLRIKLYHESLFRYEGLKSPYLYPRYGLGELPQAFA 240

Query: 852 RLSAVYGGTYMLNQPAVEVLYENGVAVGIKNGADVARAKLV 974
           RLSAVYGGTYMLNQP++EVLYENGVAVGIKNG DVARAKLV
Sbjct: 241 RLSAVYGGTYMLNQPSMEVLYENGVAVGIKNGDDVARAKLV 281

>emb|CAA06731.1| GDP dissociation inhibitor [Cicer arietinum]
          Length = 444

 Score =  396 bits (1017), Expect = e-109
 Identities = 194/282 (68%), Positives = 232/282 (81%), Gaps = 1/282 (0%)
 Frame = +3

Query: 132 MNEEYDVIVLGTGLKECIISGLLSVDKKKVLHVDRNNYYGGESASLNLIQLFERFRAGAA 311
           M+EEYDVIVLGTGLKECI+SGLLSVD  KVLH+DRN+YYGGES SLNLIQL++RFR    
Sbjct: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLIQLWKRFRGDDK 60

Query: 312 PPPSLGPSRDYNVDMVPKFMLANGKLVRVLLHTDVVKYLEFKAVDGSYVLQKGKIHKVPA 491
           PPP LG S+DYN+DM PKF++ANG LVRVL+HTDV KYL FKAVDGS+V  KGK+HKVP+
Sbjct: 61  PPPHLGSSKDYNIDMNPKFIMANGMLVRVLIHTDVTKYLYFKAVDGSFVFNKGKVHKVPS 120

Query: 492 NDSEALRSPLMGLFEKRRARNFFLYVQDYDESDPKTHKGLDLNRMTMAELYKHYDLTEDT 671
           ND EAL+SPLMG+FEKRRAR FF+YVQDY+ESDPKTH G+DL R+T  EL   + L ++T
Sbjct: 121 NDMEALKSPLMGIFEKRRARKFFIYVQDYNESDPKTHDGMDLTRVTTKELIAKFGLDDNT 180

Query: 672 QDFIGHALALHRDDAYLTQSAMPTVLRIKLYHESLFRYEGLNSPYLYPRYGLGELPQAFA 851
            DFIGHALALHRDD YL + A+ TV R+KLY ESL R++G  SPY+YP YGLGELPQAFA
Sbjct: 181 VDFIGHALALHRDDRYLNEPALDTVKRMKLYAESLARFQG-GSPYIYPLYGLGELPQAFA 239

Query: 852 RLSAVYGGTYMLNQPAVEVLYE-NGVAVGIKNGADVARAKLV 974
           RLSAVYGGTYMLN+P  +V ++  G  +G+ +  + A+ K V
Sbjct: 240 RLSAVYGGTYMLNKPECKVEFDGEGKVLGVSSEGETAKCKKV 281

>pir||T01782 GDP dissociation inhibitor - common tobacco
           gi|2501850|gb|AAB80717.1| GDP dissociation inhibitor
           [Nicotiana tabacum]
          Length = 444

 Score =  395 bits (1015), Expect = e-109
 Identities = 195/282 (69%), Positives = 230/282 (81%), Gaps = 1/282 (0%)
 Frame = +3

Query: 132 MNEEYDVIVLGTGLKECIISGLLSVDKKKVLHVDRNNYYGGESASLNLIQLFERFRAGAA 311
           M+EEYDVIVLGTGLKECI+SGLLSVD  KVLH+DRN+YYGGES SLNL+QL++RFR    
Sbjct: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLVQLWKRFRGSDK 60

Query: 312 PPPSLGPSRDYNVDMVPKFMLANGKLVRVLLHTDVVKYLEFKAVDGSYVLQKGKIHKVPA 491
           PP  LG SRD+NVDM+PKF++ANG LVRVL+HTDV KYL FKAVDGS+V  KGK+HKVPA
Sbjct: 61  PPAELGSSRDFNVDMIPKFIMANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPA 120

Query: 492 NDSEALRSPLMGLFEKRRARNFFLYVQDYDESDPKTHKGLDLNRMTMAELYKHYDLTEDT 671
            D EAL+SPLMG+FEKRRAR FF+YVQDY+ESDPKTH+G+DL R+T  EL   Y L ++T
Sbjct: 121 TDMEALKSPLMGIFEKRRARKFFIYVQDYNESDPKTHEGMDLTRVTTRELIAKYGLDDNT 180

Query: 672 QDFIGHALALHRDDAYLTQSAMPTVLRIKLYHESLFRYEGLNSPYLYPRYGLGELPQAFA 851
            DFIGHALALHRDD YL + A  TV R+KLY ESL R++G  SPY+YP YGLGELPQAFA
Sbjct: 181 VDFIGHALALHRDDRYLDEPAQDTVKRMKLYAESLARFQG-GSPYIYPLYGLGELPQAFA 239

Query: 852 RLSAVYGGTYMLNQPAVEVLY-ENGVAVGIKNGADVARAKLV 974
           RLSAVYGGTYMLN+P  +V + E G   G+ +  + A+ K V
Sbjct: 240 RLSAVYGGTYMLNKPECKVEFDEEGKVCGVTSEGETAKCKKV 281

>pir||T02030 GDP dissociation inhibitor protein - rice gi|2384758|gb|AAB69870.1|
           GDP dissociation inhibitor protein OsGDI1 [Oryza sativa]
          Length = 445

 Score =  393 bits (1009), Expect = e-108
 Identities = 198/282 (70%), Positives = 227/282 (80%), Gaps = 1/282 (0%)
 Frame = +3

Query: 132 MNEEYDVIVLGTGLKECIISGLLSVDKKKVLHVDRNNYYGGESASLNLIQLFERFRAGAA 311
           M+EEYDVIVLGTGLKECI+SGLLSVD  KVLH+DRN+YYGG+S SLNL QL++RFR    
Sbjct: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDK 60

Query: 312 PPPSLGPSRDYNVDMVPKFMLANGKLVRVLLHTDVVKYLEFKAVDGSYVLQKGKIHKVPA 491
           PP  LG SRDYNVDMVPKFM+ANG LVR L+HTDV KYL FKAVDGSYV  KGKIHKVPA
Sbjct: 61  PPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA 120

Query: 492 NDSEALRSPLMGLFEKRRARNFFLYVQDYDESDPKTHKGLDLNRMTMAELYKHYDLTEDT 671
            D EAL+SPLMGLFEKRRARNFF+YVQDYDE+DPKTH+GLDL  MT  EL   Y L++DT
Sbjct: 121 TDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDDT 180

Query: 672 QDFIGHALALHRDDAYLTQSAMPTVLRIKLYHESLFRYEGLNSPYLYPRYGLGELPQAFA 851
            DFIGHALALHRDD YL + A+ TV R+KLY ESL R++G  SP +YP YGLGELPQ FA
Sbjct: 181 VDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLPRFQG-GSPSIYPLYGLGELPQGFA 239

Query: 852 RLSAVYGGTYMLNQPAVEVLYE-NGVAVGIKNGADVARAKLV 974
           RL AVYGGTYMLN+P  +V ++  G   G+ +  + A+ K V
Sbjct: 240 RLRAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGESAKCKKV 281

>ref|NP_196517.1| GDP dissociation inhibitor [Arabidopsis thaliana]
           gi|11281301|pir||T49943 GDP dissociation inhibitor -
           Arabidopsis thaliana gi|7671434|emb|CAB89375.1| GDP
           dissociation inhibitor [Arabidopsis thaliana]
          Length = 445

 Score =  389 bits (998), Expect = e-107
 Identities = 192/282 (68%), Positives = 232/282 (82%), Gaps = 1/282 (0%)
 Frame = +3

Query: 132 MNEEYDVIVLGTGLKECIISGLLSVDKKKVLHVDRNNYYGGESASLNLIQLFERFRAGAA 311
           M+EEYDVIVLGTGLKECI+SGLLSVD  KVLH+DRN+YYGGES+SLNL QL++RFR    
Sbjct: 1   MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLTQLWKRFRGSDT 60

Query: 312 PPPSLGPSRDYNVDMVPKFMLANGKLVRVLLHTDVVKYLEFKAVDGSYVLQKGKIHKVPA 491
           P  +LG SR+YNVDM+PKF++ANG LV+ L+HTDV KYL FKAVDGS+V +KGKI+KVPA
Sbjct: 61  PEENLGASREYNVDMIPKFIMANGLLVQTLIHTDVTKYLNFKAVDGSFVYKKGKIYKVPA 120

Query: 492 NDSEALRSPLMGLFEKRRARNFFLYVQDYDESDPKTHKGLDLNRMTMAELYKHYDLTEDT 671
            D EAL+SPLMGLFEKRRAR FF+YVQDYDE DPK+H+GLDL+++T  E+   Y L +DT
Sbjct: 121 TDVEALKSPLMGLFEKRRARKFFIYVQDYDEKDPKSHEGLDLSKVTAREIISKYGLEDDT 180

Query: 672 QDFIGHALALHRDDAYLTQSAMPTVLRIKLYHESLFRYEGLNSPYLYPRYGLGELPQAFA 851
            DFIGHALALH DD YL Q A+  V RIKLY ESL R++G  SPY+YP YGLGELPQAFA
Sbjct: 181 IDFIGHALALHNDDDYLDQPAIDFVKRIKLYAESLARFQG-GSPYIYPLYGLGELPQAFA 239

Query: 852 RLSAVYGGTYMLNQPAVEVLYE-NGVAVGIKNGADVARAKLV 974
           RLSAVYGGTYMLN+P  +V ++ +G A+G+ +  + A+ K V
Sbjct: 240 RLSAVYGGTYMLNKPECKVEFDGSGKAIGVTSAGETAKCKKV 281



EST assemble image


clone accession position
1 LCL069a11_r AV629919 1 433
2 HC047d12_r AV635526 22 480
3 LC062g10_r AV623373 214 718
4 MX214d09_r BP089822 215 620
5 MX255g02_r BP092545 215 727
6 MX214f08_r BP089834 249 767
7 CM055f08_r AV390226 355 936
8 MX225h11_r BP090582 363 772
9 LC007b03_r AV619352 495 977




Chlamydomonas reinhardtii
Kazusa DNA Research Institute