KCC001473A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001473A_C01 KCC001473A_c01
aaaaCCGGACATATACAACCTAGTAGAAGCACTGCTCATAGGGGGCCGCGGGTAAAGTCA
TTAGCGGCCTTTTGGACTGAGAAGCACCTAGAGACCGAACCTGATACGTTGCATGGACGC
GAACTGGTAAGCGCACGCTTGAGCGCGCGCACAGTTACGTGCTTCGCGGGGGCTGAGAGC
CGGGAGCGAGTTCTCCGCCGGCAACGAGGAGGAGCAGCTGAGGAGCTAGCAGCAGCGAGG
CGCCATGGCGTTGGACATTCGGATTGCTGGCCGCTATCGGCTTGGGCGCAAGATTGGCGG
TGGCAGCTTCGGTGATATCTACCTTGGAACGAACATCCAGACCGGCGAGGAGGTGGCCAT
CAAGCTGGAGTCGGTCAAGACGCGGCACGCGCAGCTGCTGTACGAGTCGAAGCTGTACAA
GATTCTGCAGGGCGGAGTCGGCATCCCCAACGTGAGGTGGTATGGCGTGGAGGGCGACTA
CAACGTCATGGTCATCGATCTACTGGGCCCCAGCTTGGAGGACCTGTTCAACTTCTGCAA
CAGAAAATTCAGTCTCAAGACGGTGCTCATGCTCGCGGACCAGCTGTTATCACGAGTGGA
GTTTGTGCACTCGCGCAGCTTCATCCACAGAGATATCAAGCCTGATAACTTCCTGATGGG
CCTGGGCAAGAAGGCGAACCAGGTGCACATTATTGACTTCGGTCTGGCGAAGAAGTACCG
GGACCCCAAAACCCACATCCACATTCCCTACCGGGAGAACAAGAACCTGACGGGCACGGC
CCGCTACGCCTCCATCAACACCCACCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001473A_C01 KCC001473A_c01
         (807 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB92346.1| putative casein kinase I [Oryza sativa (japonica...   325  7e-88
pir||A55661 protein kinase ADK1 - Arabidopsis thaliana gi|121648...   322  6e-87
ref|NP_563695.2| protein kinase (ADK1) [Arabidopsis thaliana] gi...   322  6e-87
ref|NP_595760.1| casein kinase i homologue [Schizosaccharomyces ...   322  6e-87
ref|NP_177415.1| casein kinase, putative [Arabidopsis thaliana] ...   320  1e-86

>dbj|BAB92346.1| putative casein kinase I [Oryza sativa (japonica cultivar-group)]
          Length = 472

 Score =  325 bits (832), Expect = 7e-88
 Identities = 151/185 (81%), Positives = 174/185 (93%)
 Frame = +2

Query: 251 LDIRIAGRYRLGRKIGGGSFGDIYLGTNIQTGEEVAIKLESVKTRHAQLLYESKLYKILQ 430
           ++ R+  ++RLGRKIG GSFG+IYLGTNIQT EEVAIKLE+VKT+H QLLYESK+Y+ILQ
Sbjct: 1   MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQ 60

Query: 431 GGVGIPNVRWYGVEGDYNVMVIDLLGPSLEDLFNFCNRKFSLKTVLMLADQLLSRVEFVH 610
           GG GIPNVRW+GVEGDYNV+V+DLLGPSLEDLFNFC+RK SLKTVLMLADQ+++RVEFVH
Sbjct: 61  GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 120

Query: 611 SRSFIHRDIKPDNFLMGLGKKANQVHIIDFGLAKKYRDPKTHIHIPYRENKNLTGTARYA 790
           S+SF+HRDIKPDNFLMGLG++ANQV+IIDFGLAKKYRD  TH HIPYRENKNLTGTARYA
Sbjct: 121 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 180

Query: 791 SINTH 805
           S+NTH
Sbjct: 181 SVNTH 185

>pir||A55661 protein kinase ADK1 - Arabidopsis thaliana
           gi|1216484|gb|AAB47968.1| dual specificity kinase 1
          Length = 319

 Score =  322 bits (824), Expect = 6e-87
 Identities = 148/185 (80%), Positives = 172/185 (92%)
 Frame = +2

Query: 251 LDIRIAGRYRLGRKIGGGSFGDIYLGTNIQTGEEVAIKLESVKTRHAQLLYESKLYKILQ 430
           +D+ I G+++LGRKIG GSFG++YLG N+QTGEEVA+KLESVKT+H QL YESKLY +LQ
Sbjct: 1   MDLVIGGKFKLGRKIGSGSFGELYLGINVQTGEEVAVKLESVKTKHPQLHYESKLYMLLQ 60

Query: 431 GGVGIPNVRWYGVEGDYNVMVIDLLGPSLEDLFNFCNRKFSLKTVLMLADQLLSRVEFVH 610
           GG G+PN++WYGVEGDYNVMVIDLLGPSLEDLFN+CNRK SLKTVLMLADQL++RVEF+H
Sbjct: 61  GGTGVPNLKWYGVEGDYNVMVIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEFMH 120

Query: 611 SRSFIHRDIKPDNFLMGLGKKANQVHIIDFGLAKKYRDPKTHIHIPYRENKNLTGTARYA 790
           +R F+HRDIKPDNFLMGLG+KANQV+IIDFGL KKYRD +TH HIPYRENKNLTGTARYA
Sbjct: 121 TRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLGKKYRDLQTHRHIPYRENKNLTGTARYA 180

Query: 791 SINTH 805
           S+NTH
Sbjct: 181 SVNTH 185

>ref|NP_563695.2| protein kinase (ADK1) [Arabidopsis thaliana]
           gi|25287649|pir||B86170 ADK1 [imported] - Arabidopsis
           thaliana gi|4204297|gb|AAD10678.1| ADK1 [Arabidopsis
           thaliana] gi|17529246|gb|AAL38850.1| putative protein
           kinase ADK1 [Arabidopsis thaliana]
           gi|18700077|gb|AAL77651.1| At1g03930/F21M11_14
           [Arabidopsis thaliana] gi|20465967|gb|AAM20169.1|
           putative protein kinase ADK1 [Arabidopsis thaliana]
           gi|20855979|gb|AAM26641.1| At1g03930/F21M11_14
           [Arabidopsis thaliana]
          Length = 471

 Score =  322 bits (824), Expect = 6e-87
 Identities = 148/185 (80%), Positives = 172/185 (92%)
 Frame = +2

Query: 251 LDIRIAGRYRLGRKIGGGSFGDIYLGTNIQTGEEVAIKLESVKTRHAQLLYESKLYKILQ 430
           +D+ I G+++LGRKIG GSFG++YLG N+QTGEEVA+KLESVKT+H QL YESKLY +LQ
Sbjct: 1   MDLVIGGKFKLGRKIGSGSFGELYLGINVQTGEEVAVKLESVKTKHPQLHYESKLYMLLQ 60

Query: 431 GGVGIPNVRWYGVEGDYNVMVIDLLGPSLEDLFNFCNRKFSLKTVLMLADQLLSRVEFVH 610
           GG G+PN++WYGVEGDYNVMVIDLLGPSLEDLFN+CNRK SLKTVLMLADQL++RVEF+H
Sbjct: 61  GGTGVPNLKWYGVEGDYNVMVIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEFMH 120

Query: 611 SRSFIHRDIKPDNFLMGLGKKANQVHIIDFGLAKKYRDPKTHIHIPYRENKNLTGTARYA 790
           +R F+HRDIKPDNFLMGLG+KANQV+IIDFGL KKYRD +TH HIPYRENKNLTGTARYA
Sbjct: 121 TRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLGKKYRDLQTHRHIPYRENKNLTGTARYA 180

Query: 791 SINTH 805
           S+NTH
Sbjct: 181 SVNTH 185

>ref|NP_595760.1| casein kinase i homologue [Schizosaccharomyces pombe]
           gi|729712|sp|P40235|HHP1_SCHPO Casein kinase I homolog
           hhp1 gi|1076877|pir||S46357 casein kinase-1 homolog hhp1
           - fission yeast  (Schizosaccharomyces pombe)
           gi|474400|emb|CAA55473.1| Hhp1 protein kinase
           [Schizosaccharomyces pombe] gi|529902|gb|AAA21544.1|
           casein kinase-1 gi|3417423|emb|CAA20311.1| hhp1
           [Schizosaccharomyces pombe]
          Length = 365

 Score =  322 bits (824), Expect = 6e-87
 Identities = 150/187 (80%), Positives = 172/187 (91%)
 Frame = +2

Query: 245 MALDIRIAGRYRLGRKIGGGSFGDIYLGTNIQTGEEVAIKLESVKTRHAQLLYESKLYKI 424
           MALD+RI  +YR+GRKIG GSFGDIYLGTN+ +GEEVAIKLES + +H QL YE ++Y+I
Sbjct: 1   MALDLRIGNKYRIGRKIGSGSFGDIYLGTNVVSGEEVAIKLESTRAKHPQLEYEYRVYRI 60

Query: 425 LQGGVGIPNVRWYGVEGDYNVMVIDLLGPSLEDLFNFCNRKFSLKTVLMLADQLLSRVEF 604
           L GGVGIP VRW+GVE DYN MV+DLLGPSLEDLFNFCNRKFSLKTVL+LADQL+SR+EF
Sbjct: 61  LSGGVGIPFVRWFGVECDYNAMVMDLLGPSLEDLFNFCNRKFSLKTVLLLADQLISRIEF 120

Query: 605 VHSRSFIHRDIKPDNFLMGLGKKANQVHIIDFGLAKKYRDPKTHIHIPYRENKNLTGTAR 784
           +HS+SF+HRDIKPDNFLMG+GK+ NQV+IIDFGLAKKYRD KTH+HIPYRENKNLTGTAR
Sbjct: 121 IHSKSFLHRDIKPDNFLMGIGKRGNQVNIIDFGLAKKYRDHKTHLHIPYRENKNLTGTAR 180

Query: 785 YASINTH 805
           YASINTH
Sbjct: 181 YASINTH 187

>ref|NP_177415.1| casein kinase, putative [Arabidopsis thaliana]
           gi|25406203|pir||H96751 probable casein kinase I
           F28P22.10 [imported] - Arabidopsis thaliana
           gi|12323761|gb|AAG51841.1|AC010926_4 putative casein
           kinase I; 37964-34339 [Arabidopsis thaliana]
           gi|16648961|gb|AAL24332.1| putative casein kinase I
           [Arabidopsis thaliana] gi|33942053|gb|AAQ55279.1|
           At1g72710 [Arabidopsis thaliana]
          Length = 465

 Score =  320 bits (821), Expect = 1e-86
 Identities = 149/185 (80%), Positives = 173/185 (92%)
 Frame = +2

Query: 251 LDIRIAGRYRLGRKIGGGSFGDIYLGTNIQTGEEVAIKLESVKTRHAQLLYESKLYKILQ 430
           ++ R+  ++RLGRKIGGGSFG+IYLGTNIQT EEVAIKLE+VKT+H QLLYESKLYK+LQ
Sbjct: 1   MEPRVGNKFRLGRKIGGGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYKVLQ 60

Query: 431 GGVGIPNVRWYGVEGDYNVMVIDLLGPSLEDLFNFCNRKFSLKTVLMLADQLLSRVEFVH 610
           GG G+PNV+WYGVEGDYNV+VIDLLGPSLEDLFNFC+RK SLKTVLMLADQ+++R+EFVH
Sbjct: 61  GGTGVPNVKWYGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRIEFVH 120

Query: 611 SRSFIHRDIKPDNFLMGLGKKANQVHIIDFGLAKKYRDPKTHIHIPYRENKNLTGTARYA 790
            +SF+HRDIKPDNFLMGLG++ANQV++IDFGLAKKYRD   H HIPYRENKNLTGTARYA
Sbjct: 121 QKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKYRD-SNHQHIPYRENKNLTGTARYA 179

Query: 791 SINTH 805
           S+NTH
Sbjct: 180 SMNTH 184



EST assemble image


clone accession position
1 LCL092c10_r AV631341 1 409
2 LCL056g12_r AV629337 5 504
3 MXL077f01_r BP097548 6 370
4 MXL083d11_r BP097913 32 474
5 CM052g12_r AV390567 101 653
6 HC031g08_r AV634312 266 807
7 MX257h12_r BP092702 388 756




Chlamydomonas reinhardtii
Kazusa DNA Research Institute