KCC001470A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001470A_C01 KCC001470A_c01
gcacgagagcttgtgaaccacactgcAAAAGGTTTTCCCCGCCTCATAGCGAGTTTCGGT
CAAGGGGCCCCCAGCGAGCGCGAACTAAGGCCAAGCACTTATCTTTTCCACCATTGTCTA
GGTTGTGCAGCTATAGTAACGCTGTAGGGAAGCTTAACTTGAGCTTACCGGTCGCGAGTT
GTCATAGAGCGCCGGCGGCAAAACTCAGCCTAGGCAGGCCCGCAGCACGCCTGTGACGCA
GCCATGTTGAGCAAGACTCTAACGCAGCAGGAAGCGGCGGTGCGGGACGCTCAAATCGGG
CAGCTCAGAGAGTGCAAGGTGCTCGCGGAGGAGGAGGTCGTGGAGCTCGCTGCCAAGTGC
AAGGAGCTGCTGCAGCAAGAGCAGAATGTCACGCATGTTCGTGCACCCGTCGTGGTCGTC
GGCGACACTCACGGGCAGTTCCACGACCTGATGGAGATTTTCAAGATTGCTGGCCAGGCT
CCCGACGCGAACTATCTGTTCCTGGGCGACTACGTGGACCGTGGATACTACTncgtggag
actgtctgcat


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001470A_C01 KCC001470A_c01
         (551 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9SBW3|P2A4_ORYSA Serine/threonine protein phosphatase PP2A-4...   121  7e-27
gb|AAP36249.1| Homo sapiens protein phosphatase 2 (formerly 2A),...   121  7e-27
ref|NP_002706.1| protein phosphatase 2 (formerly 2A), catalytic ...   121  7e-27
ref|NP_058735.1| protein phosphatase 2a, catalytic subunit, alph...   121  7e-27
gb|AAL41019.1| type 2A protein phosphatase catalytic subunit [Ca...   121  7e-27

>sp|Q9SBW3|P2A4_ORYSA Serine/threonine protein phosphatase PP2A-4 catalytic subunit
           gi|5714762|gb|AAD48068.1|AF173881_1 serine/threonine
           protein phosphatase PP2A-4 catalytic subunit [Oryza
           sativa subsp. indica]
          Length = 315

 Score =  121 bits (303), Expect = 7e-27
 Identities = 55/87 (63%), Positives = 67/87 (76%)
 Frame = +1

Query: 286 DAQIGQLRECKVLAEEEVVELAAKCKELLQQEQNVTHVRAPVVVVGDTHGQFHDLMEIFK 465
           DAQI QL EC+ L+E EV  L  K KE+L +E NV  V++PV + GD HGQFHDL+E+F+
Sbjct: 17  DAQIEQLMECRPLSETEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFR 76

Query: 466 IAGQAPDANYLFLGDYVDRGYYXVETV 546
           I G+ PD NYLF+GDYVDRGYY VETV
Sbjct: 77  IGGKCPDTNYLFMGDYVDRGYYSVETV 103

>gb|AAP36249.1| Homo sapiens protein phosphatase 2 (formerly 2A), catalytic
           subunit, alpha isoform [synthetic construct]
          Length = 310

 Score =  121 bits (303), Expect = 7e-27
 Identities = 56/87 (64%), Positives = 65/87 (74%)
 Frame = +1

Query: 286 DAQIGQLRECKVLAEEEVVELAAKCKELLQQEQNVTHVRAPVVVVGDTHGQFHDLMEIFK 465
           D  I QL ECK L+E +V  L  K KE+L +E NV  VR PV V GD HGQFHDLME+F+
Sbjct: 11  DQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFR 70

Query: 466 IAGQAPDANYLFLGDYVDRGYYXVETV 546
           I G++PD NYLF+GDYVDRGYY VETV
Sbjct: 71  IGGKSPDTNYLFMGDYVDRGYYSVETV 97

>ref|NP_002706.1| protein phosphatase 2 (formerly 2A), catalytic subunit, alpha
           isoform [Homo sapiens] gi|30794352|ref|NP_851374.1|
           protein phosphatase 2 (formerly 2A), catalytic subunit,
           alpha isoform [Bos taurus]
           gi|129332|sp|P05323|P2AA_HUMAN Serine/threonine protein
           phosphatase 2A, catalytic subunit, alpha isoform
           (PP2A-alpha) (Replication protein C) (RP-C)
           gi|67248|pir||PAHU2A phosphoprotein phosphatase (EC
           3.1.3.16) 2-alpha catalytic chain - human
           gi|67249|pir||PARBA1 phosphoprotein phosphatase (EC
           3.1.3.16) 2A-alpha catalytic chain - rabbit
           gi|89267|pir||A27430 phosphoprotein phosphatase (EC
           3.1.3.16) 2-alpha catalytic chain - pig
           gi|89715|pir||S10371 phosphoprotein phosphatase (EC
           3.1.3.16) 2A-alpha catalytic chain - bovine
           gi|629|emb|CAA36789.1| unnamed protein product [Bos
           taurus] gi|1683|emb|CAA29471.1| unnamed protein product
           [Oryctolagus cuniculus] gi|36120|emb|CAA31176.1| protein
           phosphatase 2A (AA 1-309) [Homo sapiens]
           gi|164296|gb|AAA30981.1| protein phosphatase 2A alpha
           subunit gi|187226|gb|AAA59530.1| protein phosphatase 2A
           gi|190224|gb|AAA36466.1| protein phosphatase-2A
           catalytic subunit-alpha gi|288411|emb|CAA51381.1|
           protein phosphatase-2A [Bos taurus]
           gi|1707871|gb|AAB38019.1| phosphatase 2A
           gi|12653263|gb|AAH00400.1| Protein phosphatase 2
           (formerly 2A), catalytic subunit, alpha isoform [Homo
           sapiens] gi|12803645|gb|AAH02657.1| Protein phosphatase
           2 (formerly 2A), catalytic subunit, alpha isoform [Homo
           sapiens] gi|17939463|gb|AAH19275.1| Protein phosphatase
           2 (formerly 2A), catalytic subunit, alpha isoform [Homo
           sapiens] gi|21619480|gb|AAH31696.1| Protein phosphatase
           2 (formerly 2A), catalytic subunit, alpha isoform [Homo
           sapiens]
          Length = 309

 Score =  121 bits (303), Expect = 7e-27
 Identities = 56/87 (64%), Positives = 65/87 (74%)
 Frame = +1

Query: 286 DAQIGQLRECKVLAEEEVVELAAKCKELLQQEQNVTHVRAPVVVVGDTHGQFHDLMEIFK 465
           D  I QL ECK L+E +V  L  K KE+L +E NV  VR PV V GD HGQFHDLME+F+
Sbjct: 11  DQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFR 70

Query: 466 IAGQAPDANYLFLGDYVDRGYYXVETV 546
           I G++PD NYLF+GDYVDRGYY VETV
Sbjct: 71  IGGKSPDTNYLFMGDYVDRGYYSVETV 97

>ref|NP_058735.1| protein phosphatase 2a, catalytic subunit, alpha isoform; Protein
           phosphatase 2 (formerly 2A), catalytic subunit, alpha
           isoform [Rattus norvegicus] gi|9506983|ref|NP_062284.1|
           protein phosphatase 2a, catalytic subunit, alpha isoform
           [Mus musculus] gi|129333|sp|P13353|P2AA_MOUSE
           Serine/threonine protein phosphatase 2A, catalytic
           subunit, alpha isoform (PP2A-alpha) gi|67250|pir||PART2A
           phosphoprotein phosphatase (EC 3.1.3.16) 2A-alpha
           catalytic chain - rat gi|56819|emb|CAA34166.1| unnamed
           protein product [Rattus rattus] gi|206287|gb|AAA41904.1|
           type-2A protein phosphatase catalytic subunit
           gi|4379225|emb|CAA91558.1| phosphatase 2A catalytic
           subunit, isotype alpha [Mus musculus]
           gi|4850233|emb|CAB42983.1| serine/threonine specific
           protein phosphatase [Rattus norvegicus]
           gi|13277984|gb|AAH03856.1| Protein phosphatase 2a,
           catalytic subunit, alpha isoform [Mus musculus]
           gi|26345082|dbj|BAC36190.1| unnamed protein product [Mus
           musculus] gi|32450731|gb|AAH54458.1| Protein phosphatase
           2a, catalytic subunit, alpha isoform [Mus musculus]
          Length = 309

 Score =  121 bits (303), Expect = 7e-27
 Identities = 56/87 (64%), Positives = 65/87 (74%)
 Frame = +1

Query: 286 DAQIGQLRECKVLAEEEVVELAAKCKELLQQEQNVTHVRAPVVVVGDTHGQFHDLMEIFK 465
           D  I QL ECK L+E +V  L  K KE+L +E NV  VR PV V GD HGQFHDLME+F+
Sbjct: 11  DQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFR 70

Query: 466 IAGQAPDANYLFLGDYVDRGYYXVETV 546
           I G++PD NYLF+GDYVDRGYY VETV
Sbjct: 71  IGGKSPDTNYLFMGDYVDRGYYSVETV 97

>gb|AAL41019.1| type 2A protein phosphatase catalytic subunit [Canis familiaris]
          Length = 309

 Score =  121 bits (303), Expect = 7e-27
 Identities = 56/87 (64%), Positives = 65/87 (74%)
 Frame = +1

Query: 286 DAQIGQLRECKVLAEEEVVELAAKCKELLQQEQNVTHVRAPVVVVGDTHGQFHDLMEIFK 465
           D  I QL ECK L+E +V  L  K KE+L +E NV  VR PV V GD HGQFHDLME+F+
Sbjct: 11  DQWIEQLNECKQLSESQVKSLCEKAKEILTRESNVQEVRCPVTVCGDVHGQFHDLMELFR 70

Query: 466 IAGQAPDANYLFLGDYVDRGYYXVETV 546
           I G++PD NYLF+GDYVDRGYY VETV
Sbjct: 71  IGGKSPDTNYLFMGDYVDRGYYSVETV 97



EST assemble image


clone accession position
1 CM052e08_r AV390534 1 551
2 MXL033g07_r BP094981 27 235




Chlamydomonas reinhardtii
Kazusa DNA Research Institute