KCC001466A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001466A_C01 KCC001466A_c01
taggtGTAGTGCTATCACGGTCTGTCTATTGTGAGCCAGGGCTTGCGTCCTGAACTCCCC
TCAATTCTTTGCAACACGTGACGCTAAAATGCTGGGCATGAAGCTTTCGCCTCGCCATGT
GAGCTCGCGGGCCAAGCCGGCGCCGGCGATGCGCGGTCGCAAGGTTTGCGTCTCGGTGAA
CGCGGCAGCCCCCAAGATGGGCCAGGTTAAGAAGGTGGTGCTGGCCTACTCGGGCGGCCT
GGACACCTCCATCATCCTCAAGTGGCTGCAGGACACCTACGGCTGCGAGGTGGTCACCTT
CACCGCCGACCTGGGCCAGGGCGAGGAGCTGGAGCCTGCCCGCGCCAAGGCCGAGAAGAT
GGGCGTCAAGCAGATCTTTATTGACGACCTGCGCGAGGAGTTCGTGCGCGACTACGTGTT
CCCCATGTTCAGGGCCAACGCGCTATACGAGGGCACCTACCTGCTGGGCACCTCCATTGC
GCGCCCGCTCATCGAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001466A_C01 KCC001466A_c01
         (496 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00090144.1| COG0137: Argininosuccinate synthase [Azotobac...   181  3e-45
ref|NP_743249.1| argininosuccinate synthase [Pseudomonas putida ...   179  2e-44
ref|ZP_00013177.1| COG0137: Argininosuccinate synthase [Rhodospi...   179  2e-44
ref|ZP_00087843.1| COG0137: Argininosuccinate synthase [Pseudomo...   177  8e-44
ref|NP_252215.1| argininosuccinate synthase [Pseudomonas aerugin...   177  8e-44

>ref|ZP_00090144.1| COG0137: Argininosuccinate synthase [Azotobacter vinelandii]
          Length = 449

 Score =  181 bits (460), Expect = 3e-45
 Identities = 95/134 (70%), Positives = 104/134 (76%)
 Frame = +2

Query: 92  LGMKLSPRHVSSRAKPAPAMRGRKVCVSVNAAAPKMGQVKKVVLAYSGGLDTSIILKWLQ 271
           LG +     V   A P  +   RK C      A  M  VKKVVLAYSGGLDTS+ILKWLQ
Sbjct: 14  LGAEGRSGSVKGWAAPLQSAPFRKPC-----GADGMADVKKVVLAYSGGLDTSVILKWLQ 68

Query: 272 DTYGCEVVTFTADLGQGEELEPARAKAEKMGVKQIFIDDLREEFVRDYVFPMFRANALYE 451
           DTY CEVVTFTADLGQGEE+EPARAKA+ +GVK+IFIDDLREEFVRD+VFPMFRAN +YE
Sbjct: 69  DTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEIFIDDLREEFVRDFVFPMFRANTVYE 128

Query: 452 GTYLLGTSIARPLI 493
           G YLLGTSIARPLI
Sbjct: 129 GEYLLGTSIARPLI 142

>ref|NP_743249.1| argininosuccinate synthase [Pseudomonas putida KT2440]
           gi|30172776|sp|P59604|ASSY_PSEPK Argininosuccinate
           synthase (Citrulline--aspartate ligase)
           gi|24982523|gb|AAN66713.1|AE016299_9 argininosuccinate
           synthase [Pseudomonas putida KT2440]
          Length = 405

 Score =  179 bits (453), Expect = 2e-44
 Identities = 86/99 (86%), Positives = 93/99 (93%)
 Frame = +2

Query: 197 MGQVKKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAEKMGVKQI 376
           M  VKKVVLAYSGGLDTS+ILKWLQDTY CEVVTFTADLGQGEE+EPARAKA+ MGVK+I
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 377 FIDDLREEFVRDYVFPMFRANALYEGTYLLGTSIARPLI 493
           +IDDLREEFVRD+VFPMFRAN +YEG YLLGTSIARPLI
Sbjct: 61  YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLI 99

>ref|ZP_00013177.1| COG0137: Argininosuccinate synthase [Rhodospirillum rubrum]
          Length = 411

 Score =  179 bits (453), Expect = 2e-44
 Identities = 87/104 (83%), Positives = 94/104 (89%)
 Frame = +2

Query: 182 AAAPKMGQVKKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAEKM 361
           A + K G VKKVVLAYSGGLDTSIIL+WLQD Y CEVVTFTAD+GQGEELEPAR KAE M
Sbjct: 5   ALSMKKGDVKKVVLAYSGGLDTSIILRWLQDEYDCEVVTFTADIGQGEELEPARQKAEMM 64

Query: 362 GVKQIFIDDLREEFVRDYVFPMFRANALYEGTYLLGTSIARPLI 493
           G+K+I+I+DLREEFVRDYVFPMFRAN LYEG YLLGTSIARPLI
Sbjct: 65  GIKEIYIEDLREEFVRDYVFPMFRANTLYEGVYLLGTSIARPLI 108

>ref|ZP_00087843.1| COG0137: Argininosuccinate synthase [Pseudomonas fluorescens PfO-1]
          Length = 405

 Score =  177 bits (448), Expect = 8e-44
 Identities = 85/99 (85%), Positives = 92/99 (92%)
 Frame = +2

Query: 197 MGQVKKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAEKMGVKQI 376
           M  V KVVLAYSGGLDTS+ILKWLQDTY CEVVTFTADLGQGEE+EPARAKA+ MGVK+I
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 377 FIDDLREEFVRDYVFPMFRANALYEGTYLLGTSIARPLI 493
           +IDDLREEFVRD+VFPMFRAN +YEG YLLGTSIARPLI
Sbjct: 61  YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLI 99

>ref|NP_252215.1| argininosuccinate synthase [Pseudomonas aeruginosa PA01]
           gi|24211531|sp|Q9HY84|ASSY_PSEAE Argininosuccinate
           synthase (Citrulline--aspartate ligase)
           gi|11347449|pir||C83204 argininosuccinate synthase
           PA3525 [imported] - Pseudomonas aeruginosa (strain PAO1)
           gi|9949674|gb|AAG06913.1|AE004773_2 argininosuccinate
           synthase [Pseudomonas aeruginosa PAO1]
          Length = 405

 Score =  177 bits (448), Expect = 8e-44
 Identities = 85/99 (85%), Positives = 92/99 (92%)
 Frame = +2

Query: 197 MGQVKKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAEKMGVKQI 376
           M  VKKVVLAYSGGLDTS+ILKWLQDTY CEVVTFTADLGQGEE+EPARAKA  MGVK+I
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKARAMGVKEI 60

Query: 377 FIDDLREEFVRDYVFPMFRANALYEGTYLLGTSIARPLI 493
           +IDDLREEFVRD+V+PMFRAN +YEG YLLGTSIARPLI
Sbjct: 61  YIDDLREEFVRDFVYPMFRANTVYEGEYLLGTSIARPLI 99



EST assemble image


clone accession position
1 LC075c08_r AV624265 1 492
2 CM052d04_r AV390525 6 496
3 MX016c04_r BP086765 20 412




Chlamydomonas reinhardtii
Kazusa DNA Research Institute