KCC001455A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001455A_C01 KCC001455A_c01
GTAAAAATGCAGCTCAACGTGCGGTCCACCGCCAGCGGCGCGCGTTCGTCGACGCGCTCA
CGCCGCATGACGGCTGTGGTTCAGGCCGTCGCGCAGCGGGCTGGCACCATTGACGTCCAG
CGCAACGAGAACTTTGGCAAGCTGCGCGCTGGCTACTTGTTCCCTGAGATTGCCCGCCGG
CGGAAGGCCCACCAGGAGAAGAACCCCGATGCCAAGATCATCTCTCTGGGCATCGGTGAC
ACCACCGAGCCCCTGCCCAAGTACATCGCTGACGCCATGGCAAAGGCCGCGGCCGGCCTG
GCCACCCGCGAGGGCTACAGCGGCTACGGCGCGGAGCAGGGCCAGGGCGCGCTGCGCGAG
GCGGTCGCCTCCACCTTCTACGGCCACGCGGGCCGGGCGGCGGATGAGATCTTCATCTCG
GACGGATCCAAGTGCGACATTGCGCGCATCCAGATGATGTTTGGATCCAAGCCCACCGTG
GCCGTGCAGGACCCCTCCTACCCGGTGTACGTGGACACCTCTGTGATGATGGGCATGACG
GGCGACCACAACGGCACCGGCTTCGACGGCATCGAGTACATGGTGTGCAACCCCGACAAC
CACTTCTTCCCCGAnCTGTCCAAGGCCAAGCGCACCGACATCATCTTCTTCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001455A_C01 KCC001455A_c01
         (652 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T04985 probable transaminase (EC 2.6.1.-) T16L1.170 [simila...   234  6e-61
ref|NP_567934.1| aminotransferase family [Arabidopsis thaliana] ...   234  6e-61
gb|AAN59772.1| Putative transaminase [Oryza sativa (japonica cul...   200  2e-50
pir||A84511 probable aspartate aminotransferase [imported] - Ara...   193  2e-48
ref|NP_565359.1| aminotransferase family [Arabidopsis thaliana] ...   192  5e-48

>pir||T04985 probable transaminase (EC 2.6.1.-) T16L1.170 [similarity] -
           Arabidopsis thaliana gi|3549670|emb|CAA20581.1| putative
           protein [Arabidopsis thaliana]
           gi|7270317|emb|CAB80085.1| putative protein [Arabidopsis
           thaliana]
          Length = 426

 Score =  234 bits (598), Expect = 6e-61
 Identities = 117/181 (64%), Positives = 136/181 (74%), Gaps = 2/181 (1%)
 Frame = +1

Query: 115 VQRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAA 294
           V RN N  KL+AGYLFPEIARRR AH  K PDA++ISLGIGDTTEP+P+ I  AMAK A 
Sbjct: 24  VSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAH 83

Query: 295 GLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARIQMMFGSKP 474
            L+T EGYSGYGAEQG   LR A+A TFYG  G   D++F+SDG+KCDI+R+Q+MFGS  
Sbjct: 84  ELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMFGSNV 143

Query: 475 TVAVQDPSYPVYVDTSVMMGMTGDHNG--TGFDGIEYMVCNPDNHFFPXLSKAKRTDIIF 648
           T+AVQDPSYP YVD+SV+MG TG  N     +  IEYM C P+N FFP LS   RTDIIF
Sbjct: 144 TIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIF 203

Query: 649 F 651
           F
Sbjct: 204 F 204

>ref|NP_567934.1| aminotransferase family [Arabidopsis thaliana]
           gi|15912291|gb|AAL08279.1| AT4g33680/T16L1_170
           [Arabidopsis thaliana] gi|17529044|gb|AAL38732.1|
           unknown protein [Arabidopsis thaliana]
           gi|21436149|gb|AAM51321.1| unknown protein [Arabidopsis
           thaliana]
          Length = 461

 Score =  234 bits (598), Expect = 6e-61
 Identities = 117/181 (64%), Positives = 136/181 (74%), Gaps = 2/181 (1%)
 Frame = +1

Query: 115 VQRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAA 294
           V RN N  KL+AGYLFPEIARRR AH  K PDA++ISLGIGDTTEP+P+ I  AMAK A 
Sbjct: 59  VSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAH 118

Query: 295 GLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARIQMMFGSKP 474
            L+T EGYSGYGAEQG   LR A+A TFYG  G   D++F+SDG+KCDI+R+Q+MFGS  
Sbjct: 119 ELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMFGSNV 178

Query: 475 TVAVQDPSYPVYVDTSVMMGMTGDHNG--TGFDGIEYMVCNPDNHFFPXLSKAKRTDIIF 648
           T+AVQDPSYP YVD+SV+MG TG  N     +  IEYM C P+N FFP LS   RTDIIF
Sbjct: 179 TIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIF 238

Query: 649 F 651
           F
Sbjct: 239 F 239

>gb|AAN59772.1| Putative transaminase [Oryza sativa (japonica cultivar-group)]
          Length = 458

 Score =  200 bits (508), Expect = 2e-50
 Identities = 101/188 (53%), Positives = 128/188 (67%), Gaps = 9/188 (4%)
 Frame = +1

Query: 115 VQRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMA---- 282
           V RN N  KL+ GYLFPEI+ +R+ H +K PDAK+ISLGIGDTTEP+P  +  AMA    
Sbjct: 44  VLRNPNMEKLQKGYLFPEISIKREEHLKKYPDAKVISLGIGDTTEPIPSIVTSAMAEDVP 103

Query: 283 ----KAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI 450
               + A  L+T EGY GYG EQG   LR+ +A   Y   G    E+FISDG++CDIAR+
Sbjct: 104 FPFCRYALALSTPEGYQGYGPEQGHKNLRKEIADKVYPDMGIKESEVFISDGAQCDIARL 163

Query: 451 QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGD-HNGTGFDGIEYMVCNPDNHFFPXLSKA 627
           Q +FG   T+AVQDP++P YVD  V+MG TG   +G  + GIEYM C P+N FFP LS+ 
Sbjct: 164 QTLFGPNVTIAVQDPTFPGYVDNGVIMGQTGKADDGGRYAGIEYMRCAPENAFFPDLSRV 223

Query: 628 KRTDIIFF 651
           +RTD+IFF
Sbjct: 224 RRTDVIFF 231

>pir||A84511 probable aspartate aminotransferase [imported] - Arabidopsis
           thaliana
          Length = 429

 Score =  193 bits (490), Expect = 2e-48
 Identities = 94/190 (49%), Positives = 130/190 (67%), Gaps = 2/190 (1%)
 Frame = +1

Query: 88  VAQRAGTIDVQRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYI 267
           +A   G+  + RN N  KL+  YLFPEI RR   H EK+P+ ++ISLG GDTTEP+P+ I
Sbjct: 2   LASSGGSTKLVRNVNLEKLKNNYLFPEINRRELEHIEKHPNVQLISLGTGDTTEPIPEQI 61

Query: 268 ADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIAR 447
              M+  A GL+T EGY GYG EQG   LR+A+A TFY      ++E+F+SDG++ DI+R
Sbjct: 62  TSHMSNFAHGLSTVEGYRGYGLEQGNKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISR 121

Query: 448 IQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGD-HNGT-GFDGIEYMVCNPDNHFFPXLS 621
           +Q++ GS  T+AVQDP++P Y+D+SV++G TG  H  T  +  + YM C P+N FFP L+
Sbjct: 122 LQLLLGSNVTIAVQDPTFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLA 181

Query: 622 KAKRTDIIFF 651
              RTD+IFF
Sbjct: 182 MTPRTDVIFF 191

>ref|NP_565359.1| aminotransferase family [Arabidopsis thaliana]
           gi|15982838|gb|AAL09766.1| At2g13810/F13J11.16
           [Arabidopsis thaliana] gi|20197607|gb|AAD15433.2|
           putative aspartate aminotransferase [Arabidopsis
           thaliana] gi|20197797|gb|AAM15253.1| putative aspartate
           aminotransferase [Arabidopsis thaliana]
           gi|23505955|gb|AAN28837.1| At2g13810/F13J11.16
           [Arabidopsis thaliana]
          Length = 456

 Score =  192 bits (487), Expect = 5e-48
 Identities = 98/211 (46%), Positives = 138/211 (64%), Gaps = 2/211 (0%)
 Frame = +1

Query: 25  STASGARSSTRSRRMTAVVQAVAQRAGTIDVQRNENFGKLRAGYLFPEIARRRKAHQEKN 204
           S+AS   SS       ++   + +  G+  + RN N  KL+  YLFPEI RR   H EK+
Sbjct: 8   SSASPLCSSPSKIPKASLDFEMKKLGGSTKLVRNVNLEKLKNNYLFPEINRRELEHIEKH 67

Query: 205 PDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYG 384
           P+ ++ISLG GDTTEP+P+ I   M+  A GL+T EGY GYG EQG   LR+A+A TFY 
Sbjct: 68  PNVQLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKTLRKAIAETFYR 127

Query: 385 HAGRAADEIFISDGSKCDIARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGD-HNGT- 558
                ++E+F+SDG++ DI+R+Q++ GS  T+AVQDP++P Y+D+SV++G TG  H  T 
Sbjct: 128 DLHVKSNEVFVSDGAQSDISRLQLLLGSNVTIAVQDPTFPAYIDSSVIIGQTGHFHEKTK 187

Query: 559 GFDGIEYMVCNPDNHFFPXLSKAKRTDIIFF 651
            +  + YM C P+N FFP L+   RTD+IFF
Sbjct: 188 KYQNVVYMPCGPNNSFFPDLAMTPRTDVIFF 218



EST assemble image


clone accession position
1 MX233c01_r BP091062 1 470
2 MX208e12_r BP089500 100 455
3 CM058f05_r AV390398 111 614
4 CM050g01_r AV389740 112 479
5 HC014e06_r AV632931 289 762




Chlamydomonas reinhardtii
Kazusa DNA Research Institute