Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001445A_C01 KCC001445A_c01
(418 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00008066.1| hypothetical protein [Rhodobacter sphaeroides] 39 0.022
pir||S43427 intermediate filament protein - Sloane's squid gi|15... 37 0.049
emb|CAD67982.1| variable membrane protein [Mycoplasma hominis] 35 0.19
emb|CAD40035.1| OSJNBa0052O21.20 [Oryza sativa (japonica cultiva... 35 0.19
ref|ZP_00030506.1| COG2939: Carboxypeptidase C (cathepsin A) [Bu... 35 0.24
>ref|ZP_00008066.1| hypothetical protein [Rhodobacter sphaeroides]
Length = 435
Score = 38.5 bits (88), Expect = 0.022
Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 182 PEEPGRARGW--RGLRCQQGA*KAKGVE-ALSAERARQGKCRPEN*AGQDRAAHA----A 340
P PG+ G RG +C+ G +GV AL A R G+C +D A A A
Sbjct: 4 PSRPGQHAGVAARGGQCRGGG---RGVRLALGAARLHCGRCGRGRDRAEDAARRAGCDGA 60
Query: 341 AHGRERQGDRCCRRCRCHCKGQR 409
A R+ +G R CR CR G R
Sbjct: 61 ADARDHRGRRLCRACRSRDHGAR 83
>pir||S43427 intermediate filament protein - Sloane's squid
gi|159852|gb|AAA16612.1| intermediate filament protein
Length = 614
Score = 37.4 bits (85), Expect = 0.049
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 183 LRSLVAQEAGEAYDVNKELEKLKGWKHYLQSELDKANAALKTEQDKTAQLTQQL 344
LRS ++ + D+ +++KLKG H L SELD A L E+ Q+L
Sbjct: 345 LRSQISDKDSRLMDLQSQIDKLKGQVHLLTSELDSTTAELDNEKTLRVSEVQKL 398
>emb|CAD67982.1| variable membrane protein [Mycoplasma hominis]
Length = 2167
Score = 35.4 bits (80), Expect = 0.19
Identities = 23/62 (37%), Positives = 31/62 (49%)
Frame = +3
Query: 183 LRSLVAQEAGEAYDVNKELEKLKGWKHYLQSELDKANAALKTEQDKTAQLTQQLTDANAR 362
L L+A+E + +K E LK S LD + A K +D A+LTQ +TDA
Sbjct: 1013 LEELIAKEDAKEVGTSKAEEALKVNVADENSTLDAISKATKALEDVKAELTQNITDAKDN 1072
Query: 363 AT 368
AT
Sbjct: 1073 AT 1074
Score = 34.3 bits (77), Expect = 0.42
Identities = 19/57 (33%), Positives = 28/57 (48%)
Frame = +3
Query: 183 LRSLVAQEAGEAYDVNKELEKLKGWKHYLQSELDKANAALKTEQDKTAQLTQQLTDA 353
L+ L+ E + D NK E LK K S +D+ N A+KT +D +L + A
Sbjct: 437 LQDLINSEDAKFIDTNKASETLKNTKITSTSSIDEINQAIKTLKDAIVELKNAINGA 493
>emb|CAD40035.1| OSJNBa0052O21.20 [Oryza sativa (japonica cultivar-group)]
Length = 677
Score = 35.4 bits (80), Expect = 0.19
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = -2
Query: 303 SGRHLPCRARSADSASTPLAFQAPC*HRKPLQPLARPGSSGSHKQEAPQAGTLQTSWSHC 124
+G H PC S AST F+A P + PG++G H P + T +
Sbjct: 26 TGTHRPCVGPSVGHASTADLFRADGPTAPGRSPASGPGTAGRHLPVCPSIASRPTRTTGL 85
Query: 123 SDPDLKALPGH 91
P + + P H
Sbjct: 86 GGPSVSSRPAH 96
>ref|ZP_00030506.1| COG2939: Carboxypeptidase C (cathepsin A) [Burkholderia fungorum]
Length = 726
Score = 35.0 bits (79), Expect = 0.24
Identities = 26/75 (34%), Positives = 31/75 (40%), Gaps = 1/75 (1%)
Frame = +2
Query: 197 RARGWRGLRCQQGA*KAKGVEALSAERARQGKCRPEN*AGQDRAAHAAAHGRER-QGDRC 373
R WRG C GA A+G+ ER + G R A A GR R GDR
Sbjct: 8 RGERWRGEPCLSGAGMAEGLVRHGVERRQDGAQR----------ARRAGRGRRRFSGDRL 57
Query: 374 CRRCRCHCKGQRAHR 418
R R + G R H+
Sbjct: 58 QRTDRRYADGGRRHQ 72
