KCC001436A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001436A_C01 KCC001436A_c01
TTCTGCTGAATCCATTTATTGATTCCATACGATCTCTTACTTGCAAATCTACAGCTTGAG
CGCGAGACGAAGCTAGACGCACCTGGCTATCTTCTGCAATGCTTTCAGCGCATTTATCTT
AGCATATATCCAATAAAGGCTGCTGTTGAGGCATACCACACCTTCATTCTAGCGAAAGGG
ACCTCACAACCCTCAGAATGGCCGACAGCTCGGCGCCCAGCTCCTTCACAATTCTAGCAA
CGGGGCAACTCGAGTGCGCTGAGATCCCCGAGTGCACCAACGCGTACCTGAAGTTCCAAT
TTGTTGCCGGCGAGGACTGGCAATTACTGGATGGGCTAGAGGAGGGCATCACGCAGGCCG
CACGTGTGCCAGAAGGTCGCGACGGCGTACTGGTCTGGAACTTCCCCATCGACATCACAT
ACAAGACCACGAACGCGTTCGGGTGGCCGCAGCTGGTGGTGGCGGTGTATGGCCTGGACT
CGTTCGGGCGTGACGTCAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001436A_C01 KCC001436A_c01
         (499 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_038745.1| B9 protein [Mus musculus] gi|5668701|dbj|BAA826...   111  6e-24
ref|XP_213314.2| similar to B9 [Rattus norvegicus]                    109  2e-23
ref|NP_056496.1| B9 protein; likely ortholog of mouse endothelia...   108  5e-23
gb|AAH02944.1| EPPB9 protein [Homo sapiens]                           108  5e-23
ref|NP_650470.1| CG14870-PA [Drosophila melanogaster] gi|7300030...    77  2e-13

>ref|NP_038745.1| B9 protein [Mus musculus] gi|5668701|dbj|BAA82643.1| B9 [Mus
           musculus] gi|12833445|dbj|BAB22525.1| unnamed protein
           product [Mus musculus] gi|12845736|dbj|BAB26875.1|
           unnamed protein product [Mus musculus]
           gi|14198099|gb|AAH08113.1| B9 protein [Mus musculus]
          Length = 204

 Score =  111 bits (277), Expect = 6e-24
 Identities = 50/97 (51%), Positives = 69/97 (70%)
 Frame = +3

Query: 207 SSAPSSFTILATGQLECAEIPECTNAYLKFQFVAGEDWQLLDGLEEGITQAARVPEGRDG 386
           +++PS F ++ TGQ+E A+ PE  + Y K+ FV G+DW    GLEEGI+Q A   +    
Sbjct: 3   AASPSVFLLMITGQVESAQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQIASKSQDVRQ 62

Query: 387 VLVWNFPIDITYKTTNAFGWPQLVVAVYGLDSFGRDV 497
            LVWNFPID+T+K+TN +GWPQ+V++VYG D FG DV
Sbjct: 63  ALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDV 99

>ref|XP_213314.2| similar to B9 [Rattus norvegicus]
          Length = 214

 Score =  109 bits (273), Expect = 2e-23
 Identities = 49/97 (50%), Positives = 68/97 (69%)
 Frame = +3

Query: 207 SSAPSSFTILATGQLECAEIPECTNAYLKFQFVAGEDWQLLDGLEEGITQAARVPEGRDG 386
           +++PS F ++  GQ+E A+ PE  + Y K+ FV G+DW    GLEEGI+Q A   +    
Sbjct: 3   AASPSVFLLMVNGQVESAQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQIASKSQDVRQ 62

Query: 387 VLVWNFPIDITYKTTNAFGWPQLVVAVYGLDSFGRDV 497
            LVWNFPID+T+K+TN +GWPQ+V++VYG D FG DV
Sbjct: 63  ALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDV 99

>ref|NP_056496.1| B9 protein; likely ortholog of mouse endothelial precursor protein
           B9 [Homo sapiens] gi|5668705|dbj|BAA82655.1| B9 [Homo
           sapiens]
          Length = 204

 Score =  108 bits (269), Expect = 5e-23
 Identities = 48/97 (49%), Positives = 67/97 (68%)
 Frame = +3

Query: 207 SSAPSSFTILATGQLECAEIPECTNAYLKFQFVAGEDWQLLDGLEEGITQAARVPEGRDG 386
           +++PS F ++  GQ+E A+ PE  + Y K+ FV G+DW    GLEEGI+Q     +    
Sbjct: 3   TASPSVFLLMVNGQVESAQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQDVRQ 62

Query: 387 VLVWNFPIDITYKTTNAFGWPQLVVAVYGLDSFGRDV 497
            LVWNFPID+T+K+TN +GWPQ+V++VYG D FG DV
Sbjct: 63  ALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDV 99

>gb|AAH02944.1| EPPB9 protein [Homo sapiens]
          Length = 153

 Score =  108 bits (269), Expect = 5e-23
 Identities = 48/97 (49%), Positives = 67/97 (68%)
 Frame = +3

Query: 207 SSAPSSFTILATGQLECAEIPECTNAYLKFQFVAGEDWQLLDGLEEGITQAARVPEGRDG 386
           +++PS F ++  GQ+E A+ PE  + Y K+ FV G+DW    GLEEGI+Q     +    
Sbjct: 3   TASPSVFLLMVNGQVESAQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQDVRQ 62

Query: 387 VLVWNFPIDITYKTTNAFGWPQLVVAVYGLDSFGRDV 497
            LVWNFPID+T+K+TN +GWPQ+V++VYG D FG DV
Sbjct: 63  ALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDV 99

>ref|NP_650470.1| CG14870-PA [Drosophila melanogaster] gi|7300030|gb|AAF55201.1|
           CG14870-PA [Drosophila melanogaster]
          Length = 241

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
 Frame = +3

Query: 204 DSSAPSS-FTILATGQLECAEIP---ECTNAYLKFQFVAGEDWQLLDGLEEGITQAARVP 371
           D+ A +S F++   GQ+  A  P   +    +L+++ VAG DWQL  G + G+TQ A   
Sbjct: 45  DAKATASYFSLSIVGQIVSATFPLGPDKEFVFLRYEMVAGPDWQLSSGPQHGLTQLATNR 104

Query: 372 EGR-DGVLVWNFPIDITYKTTNAFGWPQLVVAVYGLDSFGRD 494
            G  +  +V+N PI++TYK+T+ +GWPQ++V V+G    GR+
Sbjct: 105 RGHFNEPIVFNMPIEVTYKSTSPYGWPQILVTVFGRSGLGRE 146



EST assemble image


clone accession position
1 LC062a08_r AV623317 1 494
2 LC084b03_r AV624887 1 499
3 MX031c07_r BP087305 6 469
4 CM049a05_r AV389643 18 432




Chlamydomonas reinhardtii
Kazusa DNA Research Institute