Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001423A_C01 KCC001423A_c01
(648 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH46005.1| Similar to PRP4 pre-mRNA processing factor 4 homo... 38 0.15
sp|Q9QYR6|MAPA_MOUSE Microtubule-associated protein 1A (MAP 1A) ... 35 0.95
gb|AAF06163.1| short microtubule-associated protein 1A; short MA... 35 0.95
ref|XP_346663.1| microtubule-associated protein 1 A [Rattus norv... 35 0.95
emb|CAE02398.1| OSJNBa0024J22.2 [Oryza sativa (japonica cultivar... 35 0.95
>gb|AAH46005.1| Similar to PRP4 pre-mRNA processing factor 4 homolog B (yeast)
[Danio rerio]
Length = 490
Score = 37.7 bits (86), Expect = 0.15
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Frame = -3
Query: 547 RGQGESTSLESRSSRHT*RMLSGTTKPQ-PLKEKRV-KEAAKANKSTSDT*SDVAVVGGS 374
R G S E R SR T R + + + P+K K V +A +N+ ++ + AV S
Sbjct: 193 RPSGPSEMKERRRSRSTDRSKDRSRRSKSPVKSKEVPSSSATSNRKSNTQPEEQAVDHRS 252
Query: 373 KSRPA---FRKRKRNHPDPGRTSLPQARPLAAQLRLVSTRQPKRKVARGEDARN-SRKGF 206
SR + ++R + P+ R P PL ++V+ G++ R+ SRK
Sbjct: 253 SSRSSKSGSKERSTSLPEVDRDKKPAKAPL-------------KEVSSGKENRSPSRK-- 297
Query: 205 VLQNQGRLTPSRKPRSFAQP 146
Q RL+PS +PRS P
Sbjct: 298 --QGPDRLSPSVQPRSHRSP 315
>sp|Q9QYR6|MAPA_MOUSE Microtubule-associated protein 1A (MAP 1A)
gi|6272693|gb|AAF06164.1| long microtubule-associated
protein 1A; long MAP1A [Mus musculus]
Length = 1021
Score = 35.0 bits (79), Expect = 0.95
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = -3
Query: 472 KPQPLKEKRVKEAAKANKSTSDT*SDVAVVGGSKSRPAFRKRKRNHPDPGRTSLPQARPL 293
K L+EKR KE + K + + K KRK P+ + S P +P
Sbjct: 632 KISKLEEKRDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPELKKFSKPDLKPF 691
Query: 292 AAQLR--LVSTRQPKR-KVARGEDARNSRKGFVLQNQGRLTPSRK 167
++R L + P R KV +G AR ++ L ++ R P++K
Sbjct: 692 TPEVRKTLYKAKAPGRLKVDKGRAARGEKE---LSSEPRTPPAQK 733
>gb|AAF06163.1| short microtubule-associated protein 1A; short MAP1A [Mus musculus]
Length = 797
Score = 35.0 bits (79), Expect = 0.95
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = -3
Query: 472 KPQPLKEKRVKEAAKANKSTSDT*SDVAVVGGSKSRPAFRKRKRNHPDPGRTSLPQARPL 293
K L+EKR KE + K + + K KRK P+ + S P +P
Sbjct: 408 KISKLEEKRDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPELKKFSKPDLKPF 467
Query: 292 AAQLR--LVSTRQPKR-KVARGEDARNSRKGFVLQNQGRLTPSRK 167
++R L + P R KV +G AR ++ L ++ R P++K
Sbjct: 468 TPEVRKTLYKAKAPGRLKVDKGRAARGEKE---LSSEPRTPPAQK 509
>ref|XP_346663.1| microtubule-associated protein 1 A [Rattus norvegicus]
gi|34861296|ref|XP_347366.1| microtubule-associated
protein 1 A [Rattus norvegicus]
Length = 2776
Score = 35.0 bits (79), Expect = 0.95
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Frame = -3
Query: 547 RGQGESTSLESRSSRHT*RMLSGTT----KPQPLKEKRVKEAAKANKSTSDT*SDVAVVG 380
R +GES+ R + +G K L+EK+ KE + K + +
Sbjct: 379 RVRGESSEALKAEKRRLIKDKAGKKHLKEKISKLEEKKDKEKKEIKKERKELKKEEGRKE 438
Query: 379 GSKSRPAFRKRKRNHPDPGRTSLPQARPLAAQLR--LVSTRQPKR-KVARGEDARNSRKG 209
K KRK P+ + S P +P ++R L + P R KV +G AR ++
Sbjct: 439 EKKDAKKDEKRKDTKPEVKKLSKPDLKPFTPEVRKTLYKAKAPGRVKVDKGRAARGEKE- 497
Query: 208 FVLQNQGRLTPSRK 167
L ++ R P++K
Sbjct: 498 --LSSEPRTPPAQK 509
>emb|CAE02398.1| OSJNBa0024J22.2 [Oryza sativa (japonica cultivar-group)]
gi|32492363|emb|CAE05121.1| OSJNBa0023J03.13 [Oryza
sativa (japonica cultivar-group)]
Length = 511
Score = 35.0 bits (79), Expect = 0.95
Identities = 35/128 (27%), Positives = 50/128 (38%), Gaps = 2/128 (1%)
Frame = -2
Query: 614 QQRRAGRRPLLLSVSACGWGARAGPG*VHESGVEKLAAHVTHAIRND*TATTQGEARKGG 435
+QRR R CG G G G +LA V A+ +G+ RKGG
Sbjct: 135 RQRRRRSRRRRRRRRTCGGGGGCGRGGDARGRPAELAKVVDGAVTPSLVPERRGKGRKGG 194
Query: 434 CKGKQVDIRHLKRRRGCRRIKKSASFPETKA--QSPRPRSHKPPASPAPCCTATTSLYAT 261
+G + RR G RR + P A S R RS P + + C + ++T
Sbjct: 195 -RGSSGSVAAAGRRWGGRRWAEEVRRPAGPAACDSRRARSGCPSWATSTCSRRCRTRHST 253
Query: 260 TQAQSGSR 237
+S +R
Sbjct: 254 ASPRSTAR 261
