Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001418A_C01 KCC001418A_c01
(535 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG53636.1|AF291712_1 initiation factor 3g [Arabidopsis thali... 88 6e-17
ref|NP_187747.1| eukaryotic translation initiation factor 3 subu... 86 2e-16
dbj|BAB10805.1| eukaryotic translation initiation factor 3 subun... 73 3e-12
ref|NP_196219.2| eukaryotic translation initiation factor 3, put... 57 1e-07
ref|NP_823720.1| hypothetical protein [Streptomyces avermitilis ... 49 4e-05
>gb|AAG53636.1|AF291712_1 initiation factor 3g [Arabidopsis thaliana]
gi|21593472|gb|AAM65439.1| putative eukaryotic
translation initiation factor 3 subunit [Arabidopsis
thaliana]
Length = 294
Score = 88.2 bits (217), Expect = 6e-17
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Frame = +2
Query: 65 KLRWGDTLDDED---LLPPSVTKGPDDNGIKTVIEYYKNEKGDALKKTTKIKV-VTVEKK 232
K RWG+ +D+D LLPP GPD+NG+KT IEY N++G+ +K TT+ +V +
Sbjct: 11 KFRWGEMDEDDDFDFLLPPKQVIGPDENGLKTTIEYKFNDEGNKVKITTRTRVRKLASAR 70
Query: 233 VYKVSEERRNWPRFGGAAKETPQDSVTVQGIDEIPFERVRQIKATTQEKKAT 388
+ K + ERRNWP+FG AA E +T+ +EI ER R E KAT
Sbjct: 71 LNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGTKADESKAT 122
>ref|NP_187747.1| eukaryotic translation initiation factor 3 subunit g (eIF3g)
[Arabidopsis thaliana] gi|9755847|emb|CAC01929.1|
translation initiation factor 3, subunit g (eIF3g)
[Arabidopsis thaliana]
gi|12322907|gb|AAG51445.1|AC008153_18 putative
eukaryotic translation initiation factor 3 subunit;
21071-22901 [Arabidopsis thaliana]
gi|16226341|gb|AAL16140.1|AF428308_1 AT3g11400/F24K9_7
[Arabidopsis thaliana] gi|18377870|gb|AAL67121.1|
AT3g11400/F24K9_7 [Arabidopsis thaliana]
gi|22137220|gb|AAM91455.1| AT3g11400/F24K9_7
[Arabidopsis thaliana]
Length = 294
Score = 86.3 bits (212), Expect = 2e-16
Identities = 48/112 (42%), Positives = 65/112 (57%), Gaps = 4/112 (3%)
Frame = +2
Query: 65 KLRWGDTLDDEDL---LPPSVTKGPDDNGIKTVIEYYKNEKGDALKKTTKIKV-VTVEKK 232
K RWG+ +DEDL LPP GPD+NG+KT IEY N++ + +K TT+ +V +
Sbjct: 11 KFRWGEMDEDEDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLASAR 70
Query: 233 VYKVSEERRNWPRFGGAAKETPQDSVTVQGIDEIPFERVRQIKATTQEKKAT 388
+ K + ERRNWP+FG AA E +T+ +EI ER R E KAT
Sbjct: 71 LNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGTKADESKAT 122
>dbj|BAB10805.1| eukaryotic translation initiation factor 3 subunit-like protein
[Arabidopsis thaliana]
Length = 308
Score = 72.8 bits (177), Expect = 3e-12
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Frame = +2
Query: 47 TMASRGKLRWGDTLDDED-----LLPPSVTKGPDDNGIKTVIEYYKNEKGDALKKTTKIK 211
T+ KLRWG+ +D+E+ LLPP PD NG+K VIEY NE+ +K TT +
Sbjct: 5 TIQKTKKLRWGE-IDEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTR 63
Query: 212 VVTVEKKVYKVSEERRNWPRFGGAAKETPQDSVTVQGIDEIPFERVR 352
V ++ + K + ERR+W +FG AA E +T++ ++I ER+R
Sbjct: 64 V--QKRALTKQAVERRSWNKFGDAAHEESSSYLTMRSTEDIILERIR 108
>ref|NP_196219.2| eukaryotic translation initiation factor 3, putative [Arabidopsis
thaliana] gi|18252945|gb|AAL62399.1| eukaryotic
translation initiation factor 3 subunit-like protein
[Arabidopsis thaliana] gi|25083939|gb|AAN72138.1|
eukaryotic translation initiation factor 3 subunit-like
protein [Arabidopsis thaliana]
Length = 276
Score = 57.4 bits (137), Expect = 1e-07
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +2
Query: 128 PDDNGIKTVIEYYKNEKGDALKKTTKIKVVTVEKKVYKVSEERRNWPRFGGAAKETPQDS 307
PD NG+K VIEY NE+ +K TT +V ++ + K + ERR+W +FG AA E
Sbjct: 4 PDQNGVKKVIEYKFNEEDKKVKITTTTRVQ--KRALTKQAVERRSWNKFGDAAHEESSSY 61
Query: 308 VTVQGIDEIPFERVR 352
+T++ ++I ER+R
Sbjct: 62 LTMRSTEDIILERIR 76
>ref|NP_823720.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29606192|dbj|BAC70255.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 810
Score = 48.9 bits (115), Expect = 4e-05
Identities = 52/146 (35%), Positives = 63/146 (42%), Gaps = 6/146 (4%)
Frame = +3
Query: 111 PALQRDPMTTASRR*LSITRMRRAMRLRR--PPKSRWSPWRRRSIRSPRSAVTGLASAER 284
P L R P TT R R R R RR PP SR P RR S RS +
Sbjct: 7 PPLPRPPPTTYRPRSPGPRRRLRRARFRRCRPPISRPRPHRRPSGPRLRSRAS------- 59
Query: 285 PRRRPRTR*PCRVSMRSLSSASAKSRPRRRRRRPRIFSRCWRRPTKPSSLAASRRCSTRS 464
RR PR + P L S +++SR R RRPR SR R ++ S +SRR +R
Sbjct: 60 -RRAPRPQPP-------LPSKASRSRSRSPSRRPRRASRPRRPGSRSRSPRSSRRHRSRH 111
Query: 465 AWSASCC----VRRACSRRRRSPRKR 530
+ R C RRR +PR R
Sbjct: 112 PRPGTSLRRPHPRIPCPRRRPTPRAR 137
Score = 38.1 bits (87), Expect = 0.073
Identities = 38/115 (33%), Positives = 47/115 (40%)
Frame = +3
Query: 189 LRRPPKSRWSPWRRRSIRSPRSAVTGLASAERPRRRPRTR*PCRVSMRSLSSASAKSRPR 368
L RPP + + P RSP PRRR R R R ++ RP
Sbjct: 9 LPRPPPTTYRP------RSPG-----------PRRRLR-----RARFRRCRPPISRPRPH 46
Query: 369 RRRRRPRIFSRCWRRPTKPSSLAASRRCSTRSAWSASCCVRRACSRRRRSPRKRT 533
RR PR+ SR RR +P S+ +RS S S RRA RR R R+
Sbjct: 47 RRPSGPRLRSRASRRAPRPQPPLPSKASRSRSR-SPSRRPRRASRPRRPGSRSRS 100
