Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001404A_C01 KCC001404A_c01
(395 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) ... 62 3e-09
gb|AAF71259.1|AF231707_1 vitelline envelope protein beta [Oncorh... 60 1e-08
gb|EAA42709.1| GLP_81_67830_68102 [Giardia lamblia ATCC 50803] 59 1e-08
ref|NP_735966.1| Unknown [Streptococcus agalactiae NEM316] gi|24... 58 4e-08
ref|NP_784117.1| extracellular protein [Lactobacillus plantarum ... 57 6e-08
>ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) (rsr-1)
[Caenorhabditis elegans] gi|19571645|emb|CAB04214.3| C.
elegans RSR-1 protein (corresponding sequence F28D9.1)
[Caenorhabditis elegans]
Length = 601
Score = 61.6 bits (148), Expect = 3e-09
Identities = 42/113 (37%), Positives = 53/113 (46%)
Frame = -2
Query: 394 ARQPPACWPSRPQRREQPPPCPRQTPSQRQPRQRSSRRRQSPSAPQPPGPAAGQDRSRPA 215
++ PPA P R + R + PP PR+ S Q + + RRR+SPS P A + R P+
Sbjct: 418 SKSPPA--PKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSK----SPQAPRRRRSPS 471
Query: 214 RSPRWSPRRRPRRPPAARHRPGRARRRGERA*RGPGGCGQRCERWPSAPGRAP 56
S SPRRR A R R RRR R R P + R P P R P
Sbjct: 472 GSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSR--SRSPPPPPRRP 522
Score = 52.4 bits (124), Expect = 2e-06
Identities = 42/124 (33%), Positives = 58/124 (45%), Gaps = 7/124 (5%)
Frame = -2
Query: 391 RQPPACWPSRPQRREQPP-----PCPRQTPSQRQPRQRSSRRRQSPSAPQ--PPGPAAGQ 233
R P A P RR + P P P++ S+ + +RRR+SPSA + PP P +
Sbjct: 306 RSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAK 365
Query: 232 DRSRPARSPRWSPRRRPRRPPAARHRPGRARRRGERA*RGPGGCGQRCERWPSAPGRAPA 53
RS +SP P RR R P A++ P RRR R P + E P+ R+P+
Sbjct: 366 SRS---KSP---PARRRRSPSASKSPPAPRRRRSPSKSRSP---APKREIPPARRRRSPS 416
Query: 52 AQAS 41
A S
Sbjct: 417 ASKS 420
Score = 52.0 bits (123), Expect = 2e-06
Identities = 45/131 (34%), Positives = 59/131 (44%), Gaps = 13/131 (9%)
Frame = -2
Query: 394 ARQPPACWPSRPQRREQPP-PCPRQTPSQ-RQPRQRS----SRRRQSPSAPQ-PPGPAAG 236
++ PPA P + PP P R++PS+ R P + +RRR+SPSA + PP P
Sbjct: 368 SKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRA 427
Query: 235 QDRS------RPARSPRWSPRRRPRRPPAARHRPGRARRRGERA*RGPGGCGQRCERWPS 74
+ RS R RSP S PRR + P RRR R P G R R
Sbjct: 428 KSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRR-----RSPSGSKSRSPRRRR 482
Query: 73 APGRAPAAQAS 41
+P AP + S
Sbjct: 483 SPAAAPRRRQS 493
Score = 48.1 bits (113), Expect = 3e-05
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Frame = -2
Query: 394 ARQPPACWPSR----PQRREQPPPCPRQTPSQRQPRQRSSRRRQSPSAPQ-PPGPAAGQD 230
++ PPA P+R P + PPP P++ S+ + +RRR+SPSA + PP P +
Sbjct: 338 SKSPPA--PARRRRSPSASKSPPPAPKRAKSRS--KSPPARRRRSPSASKSPPAPRRRRS 393
Query: 229 RSR---PARSPRWSPRRRPRRPPAARHRPG--RARRRGE-----RA*RGPGGCGQRCERW 80
S+ PA P RR R P A++ P RA+ R + R R P R
Sbjct: 394 PSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRR 453
Query: 79 PSAPGRAPAA 50
+P ++P A
Sbjct: 454 RRSPSKSPQA 463
Score = 44.7 bits (104), Expect = 3e-04
Identities = 30/91 (32%), Positives = 42/91 (45%), Gaps = 5/91 (5%)
Frame = -2
Query: 391 RQPPACWPSRPQRREQPPPCPRQTPSQRQPRQRSSRRRQSPSAPQPPGPAAGQDRSRPAR 212
R+ P+ P P+RR P ++P +R+ + RRRQSP + P S +R
Sbjct: 454 RRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSR 513
Query: 211 SPRWSPRRRPR-----RPPAARHRPGRARRR 134
SP P RRPR + P A P +RR
Sbjct: 514 SPP-PPPRRPRQDSEQQAPVAVKSPEMKKRR 543
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/83 (37%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -2
Query: 391 RQPPACWPSRPQRREQP---PPCPRQTPSQRQPRQRSSRRRQSPSAPQPPGPAAGQDRS- 224
R P P+RR P P PR+ S + RS RRR+SP+A + + RS
Sbjct: 441 RSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSP 500
Query: 223 RPARSPRWSPRRRPRRPPAARHR 155
R RSP S R R PP R R
Sbjct: 501 RRRRSPSSSSRSRSPPPPPRRPR 523
Score = 38.9 bits (89), Expect = 0.017
Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 35/150 (23%)
Frame = -2
Query: 385 PPACWPSRPQRREQPPPCPRQTPSQRQPRQR----------------------------S 290
PPA R RRE P + + + R+R S
Sbjct: 242 PPARGGDRRDRREDRRPVRDEKEREEESRRREIERKKRHEEAELRQKAIASVAARAKSGS 301
Query: 289 SRRRQSPSAPQPPGPAAGQDRSRPARSPRWSPRR---RPRRPPAARHRPGRARRRGERA* 119
RRR+SPSA + P PA + R P++S +P+R R + PPA P R RRR A
Sbjct: 302 PRRRRSPSASKSPPPA--RRRRSPSQSKSPAPKRAKSRSKSPPA----PAR-RRRSPSAS 354
Query: 118 RGPGGCGQRCERWPSAP----GRAPAAQAS 41
+ P +R + +P R+P+A S
Sbjct: 355 KSPPPAPKRAKSRSKSPPARRRRSPSASKS 384
Score = 33.9 bits (76), Expect = 0.56
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = -2
Query: 367 SRPQRREQPPP--CPRQTPSQRQPRQRSSRRRQSPSAPQPPGPAAGQDRSRPARSPRWSP 194
S RR PP PR+ +R R+ RRR SP PA G DR R R R
Sbjct: 208 SAGNRRRSPPRRGSPRRGSPRRDTRRSPPRRRGSP-------PARGGDR-RDRREDRRPV 259
Query: 193 RRRPRRPPAARHRPGRARRRGERA 122
R R +R R ++R E A
Sbjct: 260 RDEKEREEESRRREIERKKRHEEA 283
Score = 32.0 bits (71), Expect = 2.1
Identities = 31/78 (39%), Positives = 34/78 (42%), Gaps = 13/78 (16%)
Frame = -2
Query: 304 PRQRSSRRRQSPS--------APQPPGPAAGQDRSRPAR-SP-RWSPRRRPRRPPAARHR 155
PR+ RR SP A + G A + RS P R SP R SPRR RR P R
Sbjct: 181 PRKTPPRRNASPGGDGGGGSPAARRGGSAGNRRRSPPRRGSPRRGSPRRDTRRSPPRRRG 240
Query: 154 PGRAR---RRGERA*RGP 110
AR RR R R P
Sbjct: 241 SPPARGGDRRDRREDRRP 258
>gb|AAF71259.1|AF231707_1 vitelline envelope protein beta [Oncorhynchus mykiss]
Length = 524
Score = 59.7 bits (143), Expect = 1e-08
Identities = 44/137 (32%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Frame = -2
Query: 388 QPPACWPSRP--------QRREQPPPCPRQTPSQRQPRQRSSRRRQSPSAPQPPGPAAGQ 233
Q P WP++P QR QPP P Q P ++P Q R Q P P P Q
Sbjct: 33 QTPPSWPAQPPQKPIQPPQRPAQPPQWPVQPP--QRPAQPPQRPAQPPQRPAQPQQWPAQ 90
Query: 232 DRSRPARSPRWSPRRRPRRPPAARHRPGRARRRGERA*RGPGGCGQ---RCERWPSAPGR 62
RPA+ P+W P + P+RP RP + +R + + P Q +WP PG
Sbjct: 91 PPQRPAQPPQW-PAQPPQRPAQPPQRPAQPPQRPAQPPQRPAQPPQWPVHPPQWPVQPG- 148
Query: 61 APAAQASFSSGCEKKLS 11
P + F S K S
Sbjct: 149 TPLQRPKFPSDTGSKQS 165
Score = 40.0 bits (92), Expect = 0.008
Identities = 27/78 (34%), Positives = 34/78 (42%), Gaps = 5/78 (6%)
Frame = -2
Query: 391 RQPPACWPSRPQRREQPPPCPRQTPSQRQPRQRSSRRRQSPSAPQPPGPAAGQDRSRPAR 212
+Q PA P RP QPP P Q P ++P Q R Q P P P Q P
Sbjct: 85 QQWPAQPPQRP---AQPPQWPAQPP--QRPAQPPQRPAQPPQRPAQPPQRPAQPPQWPVH 139
Query: 211 SPRW-----SPRRRPRRP 173
P+W +P +RP+ P
Sbjct: 140 PPQWPVQPGTPLQRPKFP 157
>gb|EAA42709.1| GLP_81_67830_68102 [Giardia lamblia ATCC 50803]
Length = 90
Score = 59.3 bits (142), Expect = 1e-08
Identities = 41/94 (43%), Positives = 47/94 (49%), Gaps = 1/94 (1%)
Frame = -2
Query: 352 REQPPPCPRQTPSQRQPRQRSSRRRQSPSAPQPPGPAAGQDRSRPARSPRWSPRRRPRRP 173
R +PPPCPR PR+R RR+SP +P SR R PR PRR RP
Sbjct: 14 RRRPPPCPR-------PRRRQGSRRRSPRSP-----------SRGRRGPR-GPRRT--RP 52
Query: 172 PAARHRPGRARRRGER-A*RGPGGCGQRCERWPS 74
P HR ARRR R + R G CG + RWPS
Sbjct: 53 PPCPHRRTSARRRAWRTSGRTCGPCGTKPRRWPS 86
Score = 33.1 bits (74), Expect = 0.96
Identities = 15/37 (40%), Positives = 20/37 (53%)
Frame = -2
Query: 364 RPQRREQPPPCPRQTPSQRQPRQRSSRRRQSPSAPQP 254
R RR +PPPCP + S R+ R+S R P +P
Sbjct: 45 RGPRRTRPPPCPHRRTSARRRAWRTSGRTCGPCGTKP 81
>ref|NP_735966.1| Unknown [Streptococcus agalactiae NEM316] gi|24413110|emb|CAD47188.1|
Unknown [Streptococcus agalactiae NEM316]
Length = 1310
Score = 57.8 bits (138), Expect = 4e-08
Identities = 37/87 (42%), Positives = 58/87 (66%)
Frame = -1
Query: 395 SSPAASLLAITSSTARAASSLSSADSISAATAAAVIASTSEPISSTASRPSSRSGSFSSS 216
+S +AS A TS++ A+ S S++ SISA+T+A++ ASTS S++ S +S S S S+S
Sbjct: 997 ASMSASTSASTSASTSASMSASTSASISASTSASMSASTSASTSASTSASTSASMSASTS 1056
Query: 215 SKSSLVTS*ATSSSSSSAASAWARAKT 135
+ +S TS +TS+S S++ SA A T
Sbjct: 1057 ASTSASTSASTSASMSASTSASTSAST 1083
Score = 57.4 bits (137), Expect = 5e-08
Identities = 35/81 (43%), Positives = 57/81 (70%)
Frame = -1
Query: 395 SSPAASLLAITSSTARAASSLSSADSISAATAAAVIASTSEPISSTASRPSSRSGSFSSS 216
+S +AS+ A TSS+ A+ S S++ S+SA+T+A+ ASTS +S++ S +S S S S+S
Sbjct: 1145 ASTSASMSASTSSSTSASMSASTSASMSASTSASTSASTSASMSASTSSSTSASMSASTS 1204
Query: 215 SKSSLVTS*ATSSSSSSAASA 153
+ S TS +TS+S+S++ SA
Sbjct: 1205 ASMSASTSASTSASTSASMSA 1225
Score = 56.2 bits (134), Expect = 1e-07
Identities = 34/89 (38%), Positives = 59/89 (66%)
Frame = -1
Query: 395 SSPAASLLAITSSTARAASSLSSADSISAATAAAVIASTSEPISSTASRPSSRSGSFSSS 216
+S +AS+ A TSS+ A+ S S++ S+SA+T+A+ ASTS +S++ S S + S S+S
Sbjct: 1181 ASTSASMSASTSSSTSASMSASTSASMSASTSASTSASTSASMSASTSASMSATTSASTS 1240
Query: 215 SKSSLVTS*ATSSSSSSAASAWARAKTRR 129
+S TS +TS+S+SS++S + + +
Sbjct: 1241 VSTSASTSASTSASTSSSSSVTSNSSKEK 1269
Score = 53.5 bits (127), Expect = 7e-07
Identities = 35/87 (40%), Positives = 56/87 (64%)
Frame = -1
Query: 395 SSPAASLLAITSSTARAASSLSSADSISAATAAAVIASTSEPISSTASRPSSRSGSFSSS 216
+S +AS A TSS+ A++S S++ S SA+ +A+ ASTS +S++ S +S S S S S
Sbjct: 1093 ASTSASTSASTSSSTSASTSASTSASTSASMSASTSASTSASMSASTSASTSASTSASMS 1152
Query: 215 SKSSLVTS*ATSSSSSSAASAWARAKT 135
+ +S TS + S+S+S++ SA A T
Sbjct: 1153 ASTSSSTSASMSASTSASMSASTSAST 1179
Score = 51.2 bits (121), Expect = 3e-06
Identities = 35/85 (41%), Positives = 57/85 (66%), Gaps = 4/85 (4%)
Frame = -1
Query: 395 SSPAASLLAITSSTARAASSLSSADSISAATAAAVIASTSEPISSTASRPSSRSGSFSSS 216
+S +AS+ A TS++ A+ S S++ S SA+T+A++ ASTS S++ S +S S S S+S
Sbjct: 1117 ASTSASMSASTSASTSASMSASTSASTSASTSASMSASTSSSTSASMSASTSASMSASTS 1176
Query: 215 SKSSLVTS*A----TSSSSSSAASA 153
+ +S TS + TSSS+S++ SA
Sbjct: 1177 ASTSASTSASMSASTSSSTSASMSA 1201
>ref|NP_784117.1| extracellular protein [Lactobacillus plantarum WCFS1]
gi|28270056|emb|CAD62956.1| extracellular protein
[Lactobacillus plantarum WCFS1]
Length = 267
Score = 57.0 bits (136), Expect = 6e-08
Identities = 36/95 (37%), Positives = 57/95 (59%)
Frame = -1
Query: 395 SSPAASLLAITSSTARAASSLSSADSISAATAAAVIASTSEPISSTASRPSSRSGSFSSS 216
+S AAS S+T+ ++ S++S + SAATA+A +TS +S AS SS + S +
Sbjct: 96 TSSAASTATSASATSASSQSVASQATSSAATASAASQATSSVATSAASSASSTQSAASQA 155
Query: 215 SKSSLVTS*ATSSSSSSAASAWARAKTRRAGVKGA 111
S S+ TS A+SS++SSAAS+ A + + G+
Sbjct: 156 SSSAATTSQASSSATSSAASSTASTTSTTSSYTGS 190
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/90 (38%), Positives = 48/90 (52%)
Frame = -1
Query: 395 SSPAASLLAITSSTARAASSLSSADSISAATAAAVIASTSEPISSTASRPSSRSGSFSSS 216
SS A S + SST AAS SS+ +A T+ A ++TS SSTAS S+ S S++ S
Sbjct: 135 SSVATSAASSASSTQSAASQASSS---AATTSQASSSATSSAASSTASTTSTTS-SYTGS 190
Query: 215 SKSSLVTS*ATSSSSSSAASAWARAKTRRA 126
+ S V S S + +AS W TR +
Sbjct: 191 NLKSYVLS-QMQSRTGVSASTWNTIITRES 219
Score = 38.5 bits (88), Expect = 0.023
Identities = 29/94 (30%), Positives = 53/94 (55%)
Frame = -1
Query: 365 TSSTARAASSLSSADSISAATAAAVIASTSEPISSTASRPSSRSGSFSSSSKSSLVTS*A 186
T++T A+S + + S AT++A AST+ S+T++ S + +SS+ ++ S A
Sbjct: 76 TTTTTSTATSAAPQSATSQATSSA--ASTATSASATSASSQSVASQATSSAATASAASQA 133
Query: 185 TSSSSSSAASAWARAKTRRAGVKGAGRLRTALRA 84
TSS ++SAAS + + T+ A + + T +A
Sbjct: 134 TSSVATSAAS--SASSTQSAASQASSSAATTSQA 165
Score = 32.0 bits (71), Expect = 2.1
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Frame = -1
Query: 395 SSPAASLLAITSSTARAAS-SLSSADSISA-ATAAAVIASTSEPISSTAS---------- 252
S+ A +L AI+++ A A + ++ + D++SA A A S E + A+
Sbjct: 10 STAALALFAISTTVANADTYTVKAGDTVSAIAQAHNTSVSAIEKANKLANVNLIFIGDKL 69
Query: 251 RPSSRSGSFSSSSKSSLVTS*ATSSSSSSAASAWARAKTRRAGVKGAGRLRTALRALALC 72
+ + + ++S+ +S ATS ++SSAAS A A + T+ A A
Sbjct: 70 EVNGTTTTTTTSTATSAAPQSATSQATSSAASTATSASATSASSQSVASQATSSAATASA 129
Query: 71 ARQGT 57
A Q T
Sbjct: 130 ASQAT 134
