KCC001402A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001402A_C01 KCC001402A_c01
cgttttgattgtttACACAGTGCAAGCATACTCTCATCCTCATCCTTCTCGACGTCCGTG
AACACGGCGATGGGCGACCGCTCGGGTACGATAACCTTGATCTCGCGTGTCCCCCAACGT
CCAACTGTAACCAACCAACCAACAAACAAACAGCAACCGCGCCCCACGCTCCGTCCCCAG
CGGGACGCCGCGGGACTTGCCCACTCGCGGGCGGGCGGGGTTGCCGCAGGATGCCTGGTG
GCCGCTGGGGTATGGCTGGGGCATGGCTGGGGTATGCCTGGGGTATGGCTGGGGTATGCC
TAGGTACGCCTGCCTGCTCCCACCACCTCCACACCTCCCACCACTCCCACCGCTACGGTA
GCCACTGCTGGACGTGCGGCCGGCTCACGTTAGAAATTCGTGTCGTACGCCAGGGCTTAC
GGCTCGCGGCAACACCGCAGTAGCAGCAGTAGCAGCAGTGGCAGCAGTAGCAGCAGTGGC
AGCAGTGGCAGTAGCCTCATTGTCCGGCAGCAGTCTTTATTGTCGCTACCTTTGCGCGAC
TGGCTGCGGGCGCTGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001402A_C01 KCC001402A_c01
         (556 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_011537.1| Mid-Two Like 1; Mtl1p [Saccharomyces cerevisiae...    49  3e-05
ref|XP_321815.1| ENSANGP00000020254 [Anopheles gambiae] gi|21288...    40  4e-05
pir||T31611 hypothetical protein Y50E8A.g - Caenorhabditis elegans     44  0.001
ref|NP_730499.1| CG17233-PA [Drosophila melanogaster] gi|2309306...    44  0.001
ref|NP_730500.1| CG17233-PC [Drosophila melanogaster] gi|2309306...    44  0.001

>ref|NP_011537.1| Mid-Two Like 1; Mtl1p [Saccharomyces cerevisiae]
           gi|1723652|sp|P53214|YG1F_YEAST HYPOTHETICAL 57.5 KD
           PROTEIN IN VMA7-RPS25A INTERGENIC REGION
           gi|2132585|pir||S64314 probable membrane protein YGR023w
           - yeast (Saccharomyces cerevisiae)
           gi|1322994|emb|CAA97006.1| unnamed protein product
           [Saccharomyces cerevisiae]
          Length = 551

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
 Frame = +1

Query: 19  SASILSSSSFSTSVNTAMGDRSGTITLISRVPQRPTVTNQPTNKQQPRPTLRPQRDAAGL 198
           S S  SS   S+S ++++   S + T+IS     PT T   T+      TL         
Sbjct: 114 STSSSSSEVTSSSSSSSISPSSSSSTIISSSSSLPTFTVASTSSTVASSTLSTSSSLVIS 173

Query: 199 AHSRA---GGVAAGCLVAAGVWLGHGWGMPGVWLGYA*VRLPAPTTSTPPTTPTATVATA 369
             S        ++  L+++ +            +  + V +P+ +TS+PP++ +   +++
Sbjct: 174 TSSSTFTFSSESSSSLISSSI---------STSVSTSSVYVPSSSTSSPPSSSSELTSSS 224

Query: 370 GRAAGSR*KFVSYARAYGSRQHRSSSSSSSGSSSSSGSS 486
             ++ S     SY+ ++ S    SSSSSSS SSSSS SS
Sbjct: 225 YSSSSSSSTLFSYSSSFSSSSSSSSSSSSSSSSSSSSSS 263

>ref|XP_321815.1| ENSANGP00000020254 [Anopheles gambiae] gi|21288889|gb|EAA01182.1|
           ENSANGP00000020254 [Anopheles gambiae str. PEST]
          Length = 797

 Score = 40.0 bits (92), Expect(2) = 4e-05
 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
 Frame = +1

Query: 319 PTTSTPPTTPTATVATAGRAAGSR*KFVSYARAYGSRQHRSSSSSSSGS----SSSSGSS 486
           P  S P +TPT  +     AAG    F SY  + GS+ + SSSSSSS S    SSSSG +
Sbjct: 533 PNVSRPYSTPTPALPPILPAAG----FNSYTVSGGSKNYYSSSSSSSASSSSSSSSSGIA 588

Query: 487 GSS 495
           G+S
Sbjct: 589 GAS 591

 Score = 28.5 bits (62), Expect(2) = 4e-05
 Identities = 26/90 (28%), Positives = 36/90 (39%), Gaps = 20/90 (22%)
 Frame = +2

Query: 134 TNQQTNSNRAPRSVPSGTPRDLPTRGRAGLPQDAW--WPLG--YGWGMA----------- 268
           T+Q+    +   + PSGT   L T     L +  +  WP    + WG A           
Sbjct: 444 TSQRRGDIKIFLTSPSGTRVTLLTPRSHDLSRSGFNQWPFMSVHTWGEAPHGTWQLEIHN 503

Query: 269 -GVCLGY----GWGMPRYACLLPPPPHLPP 343
            G  LGY    GW +  Y   +PP P+ PP
Sbjct: 504 EGRLLGYSVIRGWSLVLYGTSIPPDPNDPP 533

>pir||T31611 hypothetical protein Y50E8A.g - Caenorhabditis elegans
          Length = 1585

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = -2

Query: 381 GRTSSSGYRSGGSGG--RCGGGGSRQAYLGIPQPYPRHTPAMPQPYPSGHQASCGNPARP 208
           G +S  GY SGG GG    GG G R +    P P P   P  P P PS    S G+    
Sbjct: 757 GGSSGGGYASGGGGGGGSSGGSGGRYSSAAAPPPPPPPPPPAPAPAPSSGGYSGGSSGDS 816

Query: 207 RVGKSRGVPLGTERGA 160
             G   G   G   G+
Sbjct: 817 AAGGGGGSSRGYSEGS 832

 Score = 41.2 bits (95), Expect = 0.009
 Identities = 31/97 (31%), Positives = 39/97 (39%), Gaps = 1/97 (1%)
 Frame = +1

Query: 208  RAGGVAAGCLVAAGVWLGHGWGMPGVWLG-YA*VRLPAPTTSTPPTTPTATVATAGRAAG 384
            R GG + G   + G   G G G  G   G Y+    P P    PP  P    ++ G + G
Sbjct: 755  RGGGSSGGGYASGG---GGGGGSSGGSGGRYSSAAAPPPPPPPPPPAPAPAPSSGGYSGG 811

Query: 385  SR*KFVSYARAYGSRQHRSSSSSSSGSSSSSGSSGSS 495
            S     +      SR +   SSS  G  SS G SG S
Sbjct: 812  SSGDSAAGGGGGSSRGYSEGSSSGGGGGSSGGYSGGS 848

 Score = 38.9 bits (89), Expect = 0.047
 Identities = 28/76 (36%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRC--GGGGSRQAYLG----IPQPYPRHTPAMPQPYPSGHQASCGNPAR 211
            SS GY  G SGG    GGGGS   Y G     P P P   P  P P P+   +S G    
Sbjct: 1499 SSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1558

Query: 210  PRVGKSRGVPLGTERG 163
               G + G   G+  G
Sbjct: 1559 SSGGSAAGGGGGSSGG 1574

 Score = 38.9 bits (89), Expect = 0.047
 Identities = 28/76 (36%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRC--GGGGSRQAYLG----IPQPYPRHTPAMPQPYPSGHQASCGNPAR 211
            SS GY  G SGG    GGGGS   Y G     P P P   P  P P P+   +S G    
Sbjct: 1247 SSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1306

Query: 210  PRVGKSRGVPLGTERG 163
               G + G   G+  G
Sbjct: 1307 SSGGSAAGGGGGSSGG 1322

 Score = 38.9 bits (89), Expect = 0.047
 Identities = 28/76 (36%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRC--GGGGSRQAYLG----IPQPYPRHTPAMPQPYPSGHQASCGNPAR 211
            SS GY  G SGG    GGGGS   Y G     P P P   P  P P P+   +S G    
Sbjct: 1350 SSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1409

Query: 210  PRVGKSRGVPLGTERG 163
               G + G   G+  G
Sbjct: 1410 SSGGSAAGGGGGSSGG 1425

 Score = 38.9 bits (89), Expect = 0.047
 Identities = 28/76 (36%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRC--GGGGSRQAYLG----IPQPYPRHTPAMPQPYPSGHQASCGNPAR 211
            SS GY  G SGG    GGGGS   Y G     P P P   P  P P P+   +S G    
Sbjct: 1447 SSGGYSGGSSGGSAAGGGGGSSGGYTGGSAAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1506

Query: 210  PRVGKSRGVPLGTERG 163
               G + G   G+  G
Sbjct: 1507 SSGGSAAGGGGGSSGG 1522

 Score = 38.5 bits (88), Expect = 0.061
 Identities = 28/76 (36%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRC--GGGGSRQAYLG----IPQPYPRHTPAMPQPYPSGHQASCGNPAR 211
            SS GY  G SGG    GGGGS   Y G     P P P   P  P P P+   +S G    
Sbjct: 1044 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSTAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1103

Query: 210  PRVGKSRGVPLGTERG 163
               G + G   G+  G
Sbjct: 1104 SSGGSAAGGGGGSSGG 1119

 Score = 37.4 bits (85), Expect = 0.14
 Identities = 24/54 (44%), Positives = 25/54 (45%), Gaps = 3/54 (5%)
 Frame = -2

Query: 381 GRTSSSGYRSGGSGGRCGGGGSRQAY--LGIPQPYPRHTPA-MPQPYPSGHQAS 229
           G +S   Y SGG GG    GGS   Y     P P P   PA  P P PSG  AS
Sbjct: 523 GGSSGGSYASGGGGGGGSSGGSGGGYSSAAAPPPPPPPPPAPAPAPAPSGGYAS 576

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 38/154 (24%), Positives = 50/154 (31%)
 Frame = +1

Query: 34   SSSSFSTSVNTAMGDRSGTITLISRVPQRPTVTNQPTNKQQPRPTLRPQRDAAGLAHSRA 213
            S +S   S     G  SG  +  S  P  P     P     P P   P   + G +   +
Sbjct: 945  SGASSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPPPPPAPAPAPAPSSGGYSGGSS 1004

Query: 214  GGVAAGCLVAAGVWLGHGWGMPGVWLGYA*VRLPAPTTSTPPTTPTATVATAGRAAGSR* 393
            GG AA          G G G  G + G +    P P    P   P    ++ G + GS  
Sbjct: 1005 GGSAA----------GGGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGS-- 1052

Query: 394  KFVSYARAYGSRQHRSSSSSSSGSSSSSGSSGSS 495
                             S++  G  SS G SG S
Sbjct: 1053 --------------SGGSAAGGGGGSSGGYSGGS 1072

 Score = 36.6 bits (83), Expect = 0.23
 Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
 Frame = -2

Query: 381  GRTSSSGYRSGGSGGRCGGGGSRQAYLG-------IPQPYPRHTPAMPQPYPSGHQASCG 223
            G  SS GY  G S G  GGGGS   Y G        P P P   P  P P P+   +S G
Sbjct: 886  GGGSSGGYSGGSSSG--GGGGSSGGYSGGSAALPPPPPPPPPPPPPPPAPAPAPAPSSGG 943

Query: 222  NPARPRVGKSRGVPLGTERG 163
                   G + G   G+  G
Sbjct: 944  YSGASSGGSAAGGGGGSSGG 963

 Score = 36.6 bits (83), Expect = 0.23
 Identities = 33/125 (26%), Positives = 44/125 (34%), Gaps = 6/125 (4%)
 Frame = +1

Query: 139  PTNKQQPRPTLRPQRDAAGLAHSRAGGVAAGCL------VAAGVWLGHGWGMPGVWLGYA 300
            P     P P   P   + G +   +G  AAG         + G   G G G  G + G +
Sbjct: 789  PPPPPPPPPAPAPAPSSGGYSGGSSGDSAAGGGGGSSRGYSEGSSSGGGGGSSGGYSGGS 848

Query: 301  *VRLPAPTTSTPPTTPTATVATAGRAAGSR*KFVSYARAYGSRQHRSSSSSSSGSSSSSG 480
                P P    P   P    ++ G + GS     +      S  +   SSS  G  SS G
Sbjct: 849  AAPPPPPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSSSGGGGGSSGG 908

Query: 481  SSGSS 495
             SG S
Sbjct: 909  YSGGS 913

 Score = 35.4 bits (80), Expect = 0.51
 Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRC-GG-GGSRQAYLG---IPQPYPRHTPAMPQPYPSGHQASCGNPARP 208
            SS GY  G SGG   GG GGS   Y G    P P P   P  P P P+   +S G     
Sbjct: 1299 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGS 1358

Query: 207  RVGKSRGVPLGTERG 163
              G + G   G+  G
Sbjct: 1359 SGGSAAGGGGGSSGG 1373

 Score = 35.4 bits (80), Expect = 0.51
 Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRC-GG-GGSRQAYLG---IPQPYPRHTPAMPQPYPSGHQASCGNPARP 208
            SS GY  G SGG   GG GGS   Y G    P P P   P  P P P+   +S G     
Sbjct: 1196 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGS 1255

Query: 207  RVGKSRGVPLGTERG 163
              G + G   G+  G
Sbjct: 1256 SGGSAAGGGGGSSGG 1270

 Score = 35.4 bits (80), Expect = 0.51
 Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRC-GG-GGSRQAYLG---IPQPYPRHTPAMPQPYPSGHQASCGNPARP 208
            SS GY  G SGG   GG GGS   Y G    P P P   P  P P P+   +S G     
Sbjct: 1145 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPPPAPAPAPAPSSGGYSGGS 1204

Query: 207  RVGKSRGVPLGTERG 163
              G + G   G+  G
Sbjct: 1205 SGGSAAGGGGGSSGG 1219

 Score = 34.3 bits (77), Expect = 1.1
 Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
 Frame = -2

Query: 384  AGRTSSSGYRSGGSGGRCGG--GGSRQAYLGIPQPYPRHTPAMPQPYPSGHQ--ASCGNP 217
            + R  S G  SGG GG  GG  GGS       P P P   PA P P   G+   +S G+ 
Sbjct: 824  SSRGYSEGSSSGGGGGSSGGYSGGSAAPPPPPPPPPPAPAPA-PAPSSGGYSGGSSGGSA 882

Query: 216  ARPRVGKSRGVPLGTERG 163
            A    G S G   G+  G
Sbjct: 883  AGGGGGSSGGYSGGSSSG 900

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 38/156 (24%), Positives = 52/156 (32%), Gaps = 2/156 (1%)
 Frame = +1

Query: 34   SSSSFS--TSVNTAMGDRSGTITLISRVPQRPTVTNQPTNKQQPRPTLRPQRDAAGLAHS 207
            SS  +S  +S  +A G   G+    S     P     P     P P   P   + G +  
Sbjct: 1044 SSGGYSGGSSGGSAAGGGGGSSGGYSGGSTAPPPPPPPPPPPPPAPAPAPAPSSGGYSGG 1103

Query: 208  RAGGVAAGCLVAAGVWLGHGWGMPGVWLGYA*VRLPAPTTSTPPTTPTATVATAGRAAGS 387
             +GG AA          G G G  G + G +    P P    P   P    ++ G + GS
Sbjct: 1104 SSGGSAA----------GGGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGS 1153

Query: 388  R*KFVSYARAYGSRQHRSSSSSSSGSSSSSGSSGSS 495
                               S++  G  SS G SG S
Sbjct: 1154 ----------------SGGSAAGGGGGSSGGYSGGS 1173

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 25/71 (35%), Positives = 28/71 (39%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRCGGGGSRQAYLGIPQPYPRHTPAMPQPYPSGHQASCGNPARPRVGKS 193
            SS G  +GG GG  GG     A    P P P   PA P P PS    S G+      G  
Sbjct: 1104 SSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPAPA-PAPAPSSGGYSGGSSGGSAAGGG 1162

Query: 192  RGVPLGTERGA 160
             G   G   G+
Sbjct: 1163 GGSSGGYSGGS 1173

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 25/71 (35%), Positives = 28/71 (39%)
 Frame = -2

Query: 372  SSSGYRSGGSGGRCGGGGSRQAYLGIPQPYPRHTPAMPQPYPSGHQASCGNPARPRVGKS 193
            SS G  +GG GG  GG     A    P P P   PA P P PS    S G+      G  
Sbjct: 1003 SSGGSAAGGGGGSSGGYSGGSAAPPPPPPPPPPAPA-PAPAPSSGGYSGGSSGGSAAGGG 1061

Query: 192  RGVPLGTERGA 160
             G   G   G+
Sbjct: 1062 GGSSGGYSGGS 1072

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 40/154 (25%), Positives = 49/154 (30%)
 Frame = +1

Query: 34   SSSSFSTSVNTAMGDRSGTITLISRVPQRPTVTNQPTNKQQPRPTLRPQRDAAGLAHSRA 213
            S  S   S     G  SG  T  S  P  P     P     P P   P   + G +   +
Sbjct: 1452 SGGSSGGSAAGGGGGSSGGYTGGSAAPPPPP---PPPPPPPPAPAPAPAPSSGGYSGGSS 1508

Query: 214  GGVAAGCLVAAGVWLGHGWGMPGVWLGYA*VRLPAPTTSTPPTTPTATVATAGRAAGSR* 393
            GG AAG           G G  G + G +    P P    PP  P A       ++G   
Sbjct: 1509 GGSAAG----------GGGGSSGGYTGGS--AAPPPPPPPPPPPPPAPAPAPAPSSGGY- 1555

Query: 394  KFVSYARAYGSRQHRSSSSSSSGSSSSSGSSGSS 495
                             S  SSG S++ G  GSS
Sbjct: 1556 -----------------SGGSSGGSAAGGGGGSS 1572

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 41/154 (26%), Positives = 49/154 (31%)
 Frame = +1

Query: 34   SSSSFSTSVNTAMGDRSGTITLISRVPQRPTVTNQPTNKQQPRPTLRPQRDAAGLAHSRA 213
            S  S   S     G  SG  T  S  P  P     P     P P   P   + G +   +
Sbjct: 1252 SGGSSGGSAAGGGGGSSGGYTGGSAAPPPPP---PPPPPPPPAPAPAPAPSSGGYSGGSS 1308

Query: 214  GGVAAGCLVAAGVWLGHGWGMPGVWLGYA*VRLPAPTTSTPPTTPTATVATAGRAAGSR* 393
            GG AA          G G G  G + G +    P P    PP  P    A A  + G   
Sbjct: 1309 GGSAA----------GGGGGSSGGYSGGS--AAPPPPPPPPPPPPAPAPAPAPSSGG--- 1353

Query: 394  KFVSYARAYGSRQHRSSSSSSSGSSSSSGSSGSS 495
                             S  SSG S++ G  GSS
Sbjct: 1354 ----------------YSGGSSGGSAAGGGGGSS 1371

 Score = 33.1 bits (74), Expect = 2.6
 Identities = 39/154 (25%), Positives = 49/154 (31%)
 Frame = +1

Query: 34   SSSSFSTSVNTAMGDRSGTITLISRVPQRPTVTNQPTNKQQPRPTLRPQRDAAGLAHSRA 213
            S  S S     + G  SG    +   P  P     P     P P   P   + G + + +
Sbjct: 894  SGGSSSGGGGGSSGGYSGGSAALPPPPPPPP----PPPPPPPAPAPAPAPSSGGYSGASS 949

Query: 214  GGVAAGCLVAAGVWLGHGWGMPGVWLGYA*VRLPAPTTSTPPTTPTATVATAGRAAGSR* 393
            GG AAG         G G    G   G A    P P    PP  P A       ++G   
Sbjct: 950  GGSAAG---------GGGGSSGGYSGGSAAPPPPPPPPPPPPPPPPAPAPAPAPSSG--- 997

Query: 394  KFVSYARAYGSRQHRSSSSSSSGSSSSSGSSGSS 495
                             S  SSG S++ G  GSS
Sbjct: 998  ---------------GYSGGSSGGSAAGGGGGSS 1016

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 25/73 (34%), Positives = 29/73 (39%)
 Frame = -2

Query: 381  GRTSSSGYRSGGSGGRCGGGGSRQAYLGIPQPYPRHTPAMPQPYPSGHQASCGNPARPRV 202
            G  SS GY  G S G  GGG S     G   P P   P  P P P+   +S G       
Sbjct: 821  GGGSSRGYSEGSSSGG-GGGSSGGYSGGSAAPPPPPPPPPPAPAPAPAPSSGGYSGGSSG 879

Query: 201  GKSRGVPLGTERG 163
            G + G   G+  G
Sbjct: 880  GSAAGGGGGSSGG 892

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 39/154 (25%), Positives = 49/154 (31%)
 Frame = +1

Query: 34   SSSSFSTSVNTAMGDRSGTITLISRVPQRPTVTNQPTNKQQPRPTLRPQRDAAGLAHSRA 213
            S  S   S     G  SG  +  S  P  P     P     P P   P   + G +   +
Sbjct: 1304 SGGSSGGSAAGGGGGSSGGYSGGSAAPPPPP----PPPPPPPAPAPAPAPSSGGYSGGSS 1359

Query: 214  GGVAAGCLVAAGVWLGHGWGMPGVWLGYA*VRLPAPTTSTPPTTPTATVATAGRAAGSR* 393
            GG AAG           G G  G + G +    P P    PP  P A       ++G   
Sbjct: 1360 GGSAAG----------GGGGSSGGYTGGS--AAPPPPPPPPPPPPPAPAPAPAPSSGGY- 1406

Query: 394  KFVSYARAYGSRQHRSSSSSSSGSSSSSGSSGSS 495
                             S  SSG S++ G  GSS
Sbjct: 1407 -----------------SGGSSGGSAAGGGGGSS 1423

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
 Frame = -2

Query: 372  SSSGYRSGGSGG---RCGGGGSRQAYLG---IPQPYPRHTPAMPQPYPS 244
            SS GY  G SGG     GGGGS   Y G    P P P   P  P P P+
Sbjct: 1096 SSGGYSGGSSGGSAAG-GGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPA 1143

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 32/125 (25%), Positives = 42/125 (33%), Gaps = 6/125 (4%)
 Frame = +1

Query: 139  PTNKQQPRPTLRPQRDAAGLAHSRAGGVAAGCL------VAAGVWLGHGWGMPGVWLGYA 300
            P     P P   P   + G +   +GG AAG         + G   G G G  G + G +
Sbjct: 854  PPPPPPPAPAPAPAPSSGGYSGGSSGGSAAGGGGGSSGGYSGGSSSGGGGGSSGGYSGGS 913

Query: 301  *VRLPAPTTSTPPTTPTATVATAGRAAGSR*KFVSYARAYGSRQHRSSSSSSSGSSSSSG 480
                P P    PP  P    A A   +                     S +SSG S++ G
Sbjct: 914  AALPPPPPPPPPPPPPPPAPAPAPAPSSG-----------------GYSGASSGGSAAGG 956

Query: 481  SSGSS 495
              GSS
Sbjct: 957  GGGSS 961

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
 Frame = -2

Query: 372  SSSGYRSGGSGG---RCGGGGSRQAYLG---IPQPYPRHTPAMPQPYPS 244
            SS GY  G SGG     GGGGS   Y G    P P P   P  P P P+
Sbjct: 995  SSGGYSGGSSGGSAAG-GGGGSSGGYSGGSAAPPPPPPPPPPAPAPAPA 1042

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 40/154 (25%), Positives = 49/154 (30%)
 Frame = +1

Query: 34   SSSSFSTSVNTAMGDRSGTITLISRVPQRPTVTNQPTNKQQPRPTLRPQRDAAGLAHSRA 213
            S  S   S     G  SG  +  S  P  P     P     P P   P   + G +   +
Sbjct: 1150 SGGSSGGSAAGGGGGSSGGYSGGSAAPPPPP----PPPPPPPAPAPAPAPSSGGYSGGSS 1205

Query: 214  GGVAAGCLVAAGVWLGHGWGMPGVWLGYA*VRLPAPTTSTPPTTPTATVATAGRAAGSR* 393
            GG AAG           G G  G + G +    P P    PP  P    A A  + G   
Sbjct: 1206 GGSAAG----------GGGGSSGGYSGGS--AAPPPPPPPPPPPPAPAPAPAPSSGGY-- 1251

Query: 394  KFVSYARAYGSRQHRSSSSSSSGSSSSSGSSGSS 495
                             S  SSG S++ G  GSS
Sbjct: 1252 -----------------SGGSSGGSAAGGGGGSS 1268

>ref|NP_730499.1| CG17233-PA [Drosophila melanogaster] gi|23093064|gb|AAN11623.1|
           CG17233-PA [Drosophila melanogaster]
          Length = 1173

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 39/125 (31%), Positives = 50/125 (39%), Gaps = 9/125 (7%)
 Frame = -2

Query: 555 QRPQPVAQR*RQ*RLLPDNEATATAATAATAATAATAATAVLPRAVSPGVRHE--FLT*A 382
           Q+ Q  AQ+ RQ +    +EAT      A AA AA AA A   + + P +  E  FL  A
Sbjct: 395 QQQQQQAQQQRQEK----SEATQQQEEEANAAAAAAAAAAASNKVIVPNIEEELDFLADA 450

Query: 381 GRTSSSGYRSG-GSGGRCGGGGSRQAYLGI------PQPYPRHTPAMPQPYPSGHQASCG 223
             T   GY +   S GR     +     GI      P P P + P       +GH  S  
Sbjct: 451 TATPKQGYANSLSSNGRGTNSSTNNTNFGIRNPNKTPSPEPTNCPPNSHASNNGHGHSAV 510

Query: 222 NPARP 208
            P  P
Sbjct: 511 TPVAP 515

>ref|NP_730500.1| CG17233-PC [Drosophila melanogaster] gi|23093065|gb|AAF49048.3|
            CG17233-PC [Drosophila melanogaster]
          Length = 1465

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 39/125 (31%), Positives = 50/125 (39%), Gaps = 9/125 (7%)
 Frame = -2

Query: 555  QRPQPVAQR*RQ*RLLPDNEATATAATAATAATAATAATAVLPRAVSPGVRHE--FLT*A 382
            Q+ Q  AQ+ RQ +    +EAT      A AA AA AA A   + + P +  E  FL  A
Sbjct: 687  QQQQQQAQQQRQEK----SEATQQQEEEANAAAAAAAAAAASNKVIVPNIEEELDFLADA 742

Query: 381  GRTSSSGYRSG-GSGGRCGGGGSRQAYLGI------PQPYPRHTPAMPQPYPSGHQASCG 223
              T   GY +   S GR     +     GI      P P P + P       +GH  S  
Sbjct: 743  TATPKQGYANSLSSNGRGTNSSTNNTNFGIRNPNKTPSPEPTNCPPNSHASNNGHGHSAV 802

Query: 222  NPARP 208
             P  P
Sbjct: 803  TPVAP 807



EST assemble image


clone accession position
1 LC083h11_r AV624875 1 348
2 CM045c11_r AV389680 48 596




Chlamydomonas reinhardtii
Kazusa DNA Research Institute