KCC001341A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001341A_C01 KCC001341A_c01
cgtgcgtgtatgtatgtatggtgtgcgtgcatttaccctgcttgataagtcgtaacacgg
caaggtggacggcgaggccaGGTGGCTTTGTACTGCTAGGTGGCGGTGGCTGTGGCGGTG
GGCGTGGGCGTGGGCGCGGGCGCCCGGCGGTGTGCGTGTGGGCAGATCGCGTGTCACACG
GGCAACTGGGTACGCTAGCAGCAACAACAACAACATTCATGCACAGAAATGCCAAGTGCC
ATGCACAATTGTGTTTGCGCACCGAAGAAACGCCTCATAAAGCACGATGCAAGGCTGCTC
GGCTCGCACCGCGCACCGTGCGCGAAGCAAGGAAAGCAAGGAAGGGTTGATGCGGCGGCG
GCTCTGCGTGGTTCGTCCAGCGCTGCACGTGCGTGCGTGTGTGCATGCGTGGGTGTGGTT
TGGTGGCTGGTAGGCGCGTAGGCTGGGGTTATGGACGGATGGGAGCTCCCTATGGGCAGG
GCTGTGCGTGGTTGTGTTTTCCTTGTGACATGTCGTCGTATCTGCCGCAACTGGCTGTCG
TTTGTACTGTGTACGGGCTCTTCTTTCTAACGTTTGTATGTATGTATGTGCAAGTGTGGA
AGACGAATGTTGACATGGCATAGACGTAGCCACATTGGTTGCGGCCCACGGAAGGCCGGC
GTTATGTTGCAGTCGCATACAATACCGTGTGTTTGGAACTTAGCTTTGTACGATTAGCTT
TCGCAGCGTGTACGGTATATATCAATCACAGTGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001341A_C01 KCC001341A_c01
         (754 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_572458.2| slipper CG2272-PA [Drosophila melanogaster] gi|...    32  0.020
gb|AAM50203.1| GH26507p [Drosophila melanogaster]                      32  0.020
gb|AAL08011.1|AF416233_1 mixed lineage kinase [Drosophila melano...    32  0.020
ref|NP_001088.1| acrosin precursor; proacrosin [Homo sapiens] gi...    40  0.039
sp|P48038|ACRO_RABIT Acrosin precursor gi|1085468|pir||S47538 ac...    40  0.039

>ref|NP_572458.2| slipper CG2272-PA [Drosophila melanogaster]
           gi|15554294|gb|AAK98795.1| mixed lineage protein kinase
           [Drosophila melanogaster] gi|22831933|gb|AAF46344.2|
           CG2272-PA [Drosophila melanogaster]
          Length = 1161

 Score = 31.6 bits (70), Expect(2) = 0.020
 Identities = 19/48 (39%), Positives = 25/48 (51%), Gaps = 2/48 (4%)
 Frame = +2

Query: 197 SSNNNNIHAQKCQVPCTIVFAH--RRNAS*STMQGCSARTAHRARSKE 334
           +SNNNN        P TI+     R N++ ST     A+  HRARS+E
Sbjct: 684 NSNNNNNQTNLTSQPNTIIVLQNGRNNSNSSTTSQSPAKIYHRARSQE 731

 Score = 28.5 bits (62), Expect(2) = 0.020
 Identities = 17/55 (30%), Positives = 24/55 (42%)
 Frame = +3

Query: 51  RNTARWTARPGGFVLLGGGGCGGGRGRGRGRPAVCVWADRVSHGQLGTLAATTTT 215
           +  A  T  PG  +L G GG GG        P + +   R ++  +G   A TTT
Sbjct: 596 QQVASLTPPPGLGILGGSGGAGGTPATPLLYPGIPIILTRPNNNNIGNCKAITTT 650

>gb|AAM50203.1| GH26507p [Drosophila melanogaster]
          Length = 1161

 Score = 31.6 bits (70), Expect(2) = 0.020
 Identities = 19/48 (39%), Positives = 25/48 (51%), Gaps = 2/48 (4%)
 Frame = +2

Query: 197 SSNNNNIHAQKCQVPCTIVFAH--RRNAS*STMQGCSARTAHRARSKE 334
           +SNNNN        P TI+     R N++ ST     A+  HRARS+E
Sbjct: 684 NSNNNNNQTNLTSQPNTIIVLQNGRNNSNSSTTSQSPAKIYHRARSQE 731

 Score = 28.5 bits (62), Expect(2) = 0.020
 Identities = 17/55 (30%), Positives = 24/55 (42%)
 Frame = +3

Query: 51  RNTARWTARPGGFVLLGGGGCGGGRGRGRGRPAVCVWADRVSHGQLGTLAATTTT 215
           +  A  T  PG  +L G GG GG        P + +   R ++  +G   A TTT
Sbjct: 596 QQVASLTPPPGLGILGGSGGAGGTPATPLLYPGIPIILTRPNNNNIGNCKAITTT 650

>gb|AAL08011.1|AF416233_1 mixed lineage kinase [Drosophila melanogaster]
          Length = 1148

 Score = 31.6 bits (70), Expect(2) = 0.020
 Identities = 19/48 (39%), Positives = 25/48 (51%), Gaps = 2/48 (4%)
 Frame = +2

Query: 197 SSNNNNIHAQKCQVPCTIVFAH--RRNAS*STMQGCSARTAHRARSKE 334
           +SNNNN        P TI+     R N++ ST     A+  HRARS+E
Sbjct: 671 NSNNNNNQTNLTSQPNTIIVLQNGRNNSNSSTTSQSPAKIYHRARSQE 718

 Score = 28.5 bits (62), Expect(2) = 0.020
 Identities = 17/55 (30%), Positives = 24/55 (42%)
 Frame = +3

Query: 51  RNTARWTARPGGFVLLGGGGCGGGRGRGRGRPAVCVWADRVSHGQLGTLAATTTT 215
           +  A  T  PG  +L G GG GG        P + +   R ++  +G   A TTT
Sbjct: 583 QQVASLTPPPGLGILGGSGGAGGTPATPLLYPGIPIILTRPNNNNIGNCKAITTT 637

>ref|NP_001088.1| acrosin precursor; proacrosin [Homo sapiens]
           gi|28326|emb|CAA68784.1| unnamed protein product [Homo
           sapiens]
          Length = 421

 Score = 40.0 bits (92), Expect = 0.039
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -1

Query: 148 AGRPRPRPRPPPQPPPPSSTKPP 80
           A +PRP P PPP PPPP+S  PP
Sbjct: 341 AAQPRPPPSPPPPPPPPASPLPP 363

>sp|P48038|ACRO_RABIT Acrosin precursor gi|1085468|pir||S47538 acrosin (EC 3.4.21.10)
           precursor - rabbit gi|451842|gb|AAA61630.1|
           preproacrosin gi|1090525|prf||2019255A prepro-acrosin
          Length = 431

 Score = 40.0 bits (92), Expect = 0.039
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -1

Query: 139 PRPRPRPPPQPPPPSSTKPP 80
           P P P PPP PPPP+STKPP
Sbjct: 365 PPPPPPPPPPPPPPASTKPP 384

 Score = 33.9 bits (76), Expect = 2.8
 Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
 Frame = -1

Query: 199 ASVPSCPCDTRSAHTH-------TAGRPRPRPRPPPQPPPPSSTKPP 80
           AS P  P      H H        A  P P P PPP PPPP    PP
Sbjct: 325 ASGPPHPHPHPHPHPHPRPPQPPAAQAPPPPPPPPPPPPPPPPPPPP 371

 Score = 32.7 bits (73), Expect = 6.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 139 PRPRPRPPPQPPPPSSTKPP 80
           P P P PPP PPPP    PP
Sbjct: 354 PPPPPPPPPPPPPPPPPPPP 373

 Score = 32.7 bits (73), Expect = 6.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 139 PRPRPRPPPQPPPPSSTKPP 80
           P P P PPP PPPP    PP
Sbjct: 356 PPPPPPPPPPPPPPPPPPPP 375

 Score = 32.7 bits (73), Expect = 6.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 139 PRPRPRPPPQPPPPSSTKPP 80
           P P P PPP PPPP    PP
Sbjct: 357 PPPPPPPPPPPPPPPPPPPP 376

 Score = 32.7 bits (73), Expect = 6.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 139 PRPRPRPPPQPPPPSSTKPP 80
           P P P PPP PPPP    PP
Sbjct: 355 PPPPPPPPPPPPPPPPPPPP 374

 Score = 32.7 bits (73), Expect = 6.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 139 PRPRPRPPPQPPPPSSTKPP 80
           P P P PPP PPPP    PP
Sbjct: 353 PPPPPPPPPPPPPPPPPPPP 372



EST assemble image


clone accession position
1 LCL026a10_r AV627389 1 505
2 MX010h12_r BP086537 272 754
3 CM039b05_r AV388960 364 657




Chlamydomonas reinhardtii
Kazusa DNA Research Institute