KCC001302A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001302A_C01 KCC001302A_c01
ggacctcttcaagaagattggcgaggcgtatgaggtgctgtcggatgacaacaagaaggc
catctatgacaagtacggcgAGGCAGGGCTACGAGGCGGCATGGGCGGCATGGGCGGCGG
CCCGGGCGTGGAGTTCACCAACCCCTTCGACCTGTTCGAGTCGTTCTTCGGCGGCGGCAT
GGGAGGCATGGGCGGCATGGGTGGCATGGGCGGCGGCTTCTCGCAGCGCTCGCGCACCCG
GGCCGTGCCGGGCGAGGACGACAAGGTTGACCTGCAGCTGGACTTCCTGGAGGCGGTGTT
CGGGTGCAGCCGCGAGCTGGACGTGGACAGGCTCACCGGCTGCGACGAGTGCGAGACCAC
GGGCGTGCGCAAGGGCACCACGCCCTCCACCTGCCCGCAGTGCCAGGGCACGGGCCAGGT
GGTGTCGGCGGTGCGCACGCCGCTGGGCACCTTCCAGCAGGTGTCGCTCTGTCCGCGCTG
CGAGGGCAGCGGCCAGATCTCCCAGCCCTGCACCAAGTGCCAGGGCGACGGCCGCGTGCG
CGAGACGAAACGCATCTCGCTCAAGGTGCCCGCCGGTGTGGACGCGGGCTCGCGGCTGCG
CGTGCGCGGCGAGGGCAACAGCGGGCGGCGCGGCGGCGAGCCGGGCGACCTGTACGTGTA
CATCACCATCAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001302A_C01 KCC001302A_c01
         (672 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T06102 heat shock protein T5J17.130, dnaJ-type - Arabidopsi...   277  9e-74
ref|NP_568076.1| DnaJ protein, putative [Arabidopsis thaliana] g...   277  9e-74
dbj|BAB70509.1| DNAJ homologue [Oryza sativa]                         272  3e-72
ref|NP_565533.1| DnaJ protein, putative [Arabidopsis thaliana] g...   263  2e-69
gb|AAP40480.1| putative DnaJ protein [Arabidopsis thaliana]           263  2e-69

>pir||T06102 heat shock protein T5J17.130, dnaJ-type - Arabidopsis thaliana
           gi|4490747|emb|CAB38909.1| DnaJ-like protein
           [Arabidopsis thaliana] gi|7271051|emb|CAB80659.1|
           DnaJ-like protein [Arabidopsis thaliana]
          Length = 396

 Score =  277 bits (709), Expect = 9e-74
 Identities = 135/225 (60%), Positives = 167/225 (74%), Gaps = 2/225 (0%)
 Frame = +2

Query: 2   DLFKKIGEAYEVLSDDNKKAIYDKYGEAGLRG-GMGGMGGGPGVEFTNPFDLFESFFGGG 178
           D FK+I  AYE+LSDD K+++YD+YGEAG++G GMGGMG     +++NPFDLFES F G 
Sbjct: 73  DKFKEISNAYEILSDDEKRSLYDRYGEAGVKGAGMGGMG-----DYSNPFDLFESLFEG- 126

Query: 179 MGGMGGMGGMGGGFSQR-SRTRAVPGEDDKVDLQLDFLEAVFGCSRELDVDRLTGCDECE 355
              MGGMGGMGGG   R SR+RA+ GED+   L L+F EAVFG  +E+++ RL  C  C 
Sbjct: 127 ---MGGMGGMGGGMGSRGSRSRAIDGEDEYYSLILNFKEAVFGIEKEIEISRLESCGTCN 183

Query: 356 TTGVRKGTTPSTCPQCQGTGQVVSAVRTPLGTFQQVSLCPRCEGSGQISQPCTKCQGDGR 535
            +G + GT P+ C  C G GQVV++ RTPLG FQQV  C  C G+G+IS+PC  C GDGR
Sbjct: 184 GSGAKAGTKPTKCKTCGGQGQVVASTRTPLGVFQQVMTCSPCNGTGEISKPCGACSGDGR 243

Query: 536 VRETKRISLKVPAGVDAGSRLRVRGEGNSGRRGGEPGDLYVYITI 670
           VR TKRISLKVPAGVD+GSRLRVRGEGN+G+RGG PGDL+  I +
Sbjct: 244 VRRTKRISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFAVIEV 288

>ref|NP_568076.1| DnaJ protein, putative [Arabidopsis thaliana]
           gi|15450581|gb|AAK96562.1| AT4g39960/T5J17_130
           [Arabidopsis thaliana] gi|17380628|gb|AAL36077.1|
           AT4g39960/T5J17_130 [Arabidopsis thaliana]
          Length = 447

 Score =  277 bits (709), Expect = 9e-74
 Identities = 135/225 (60%), Positives = 167/225 (74%), Gaps = 2/225 (0%)
 Frame = +2

Query: 2   DLFKKIGEAYEVLSDDNKKAIYDKYGEAGLRG-GMGGMGGGPGVEFTNPFDLFESFFGGG 178
           D FK+I  AYE+LSDD K+++YD+YGEAG++G GMGGMG     +++NPFDLFES F G 
Sbjct: 124 DKFKEISNAYEILSDDEKRSLYDRYGEAGVKGAGMGGMG-----DYSNPFDLFESLFEG- 177

Query: 179 MGGMGGMGGMGGGFSQR-SRTRAVPGEDDKVDLQLDFLEAVFGCSRELDVDRLTGCDECE 355
              MGGMGGMGGG   R SR+RA+ GED+   L L+F EAVFG  +E+++ RL  C  C 
Sbjct: 178 ---MGGMGGMGGGMGSRGSRSRAIDGEDEYYSLILNFKEAVFGIEKEIEISRLESCGTCN 234

Query: 356 TTGVRKGTTPSTCPQCQGTGQVVSAVRTPLGTFQQVSLCPRCEGSGQISQPCTKCQGDGR 535
            +G + GT P+ C  C G GQVV++ RTPLG FQQV  C  C G+G+IS+PC  C GDGR
Sbjct: 235 GSGAKAGTKPTKCKTCGGQGQVVASTRTPLGVFQQVMTCSPCNGTGEISKPCGACSGDGR 294

Query: 536 VRETKRISLKVPAGVDAGSRLRVRGEGNSGRRGGEPGDLYVYITI 670
           VR TKRISLKVPAGVD+GSRLRVRGEGN+G+RGG PGDL+  I +
Sbjct: 295 VRRTKRISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFAVIEV 339

>dbj|BAB70509.1| DNAJ homologue [Oryza sativa]
          Length = 436

 Score =  272 bits (696), Expect = 3e-72
 Identities = 135/221 (61%), Positives = 165/221 (74%)
 Frame = +2

Query: 8   FKKIGEAYEVLSDDNKKAIYDKYGEAGLRGGMGGMGGGPGVEFTNPFDLFESFFGGGMGG 187
           FK I  AYEVLSDD K++IYDKYGEAGL+G   GMG G   +++NPFDLFES     + G
Sbjct: 131 FKDISNAYEVLSDDEKRSIYDKYGEAGLKGA--GMGAG---DYSNPFDLFESL----LEG 181

Query: 188 MGGMGGMGGGFSQRSRTRAVPGEDDKVDLQLDFLEAVFGCSRELDVDRLTGCDECETTGV 367
            GGMGGMGG   + +R R + G+D+  +L L+F EAVFG  +E+++ RL GC+ C+ TG 
Sbjct: 182 FGGMGGMGG---RAARNRPMQGDDEAYNLVLNFKEAVFGVEKEIEITRLEGCNTCDGTGA 238

Query: 368 RKGTTPSTCPQCQGTGQVVSAVRTPLGTFQQVSLCPRCEGSGQISQPCTKCQGDGRVRET 547
           + GT P+TC  C G GQVVS+ RTPLG FQQVS C  C G+G+ S PC  C GDGRVR+T
Sbjct: 239 KPGTKPTTCKTCGGQGQVVSSTRTPLGIFQQVSTCNTCGGTGEFSTPCNTCGGDGRVRKT 298

Query: 548 KRISLKVPAGVDAGSRLRVRGEGNSGRRGGEPGDLYVYITI 670
           KRISLKVPAGVD+GSRLRVR EGN+GRRGG PGDLYV+I +
Sbjct: 299 KRISLKVPAGVDSGSRLRVRSEGNAGRRGGPPGDLYVFIDV 339

>ref|NP_565533.1| DnaJ protein, putative [Arabidopsis thaliana]
           gi|20197886|gb|AAD22362.2| putative DnaJ protein
           [Arabidopsis thaliana]
          Length = 442

 Score =  263 bits (671), Expect = 2e-69
 Identities = 130/221 (58%), Positives = 158/221 (70%)
 Frame = +2

Query: 8   FKKIGEAYEVLSDDNKKAIYDKYGEAGLRGGMGGMGGGPGVEFTNPFDLFESFFGGGMGG 187
           FK+I  AYEVLSDD KK++YD+YGEAGL+G   G G G   +F+NPFDLF+S F G    
Sbjct: 127 FKEISNAYEVLSDDEKKSLYDRYGEAGLKGA-AGFGNG---DFSNPFDLFDSLFEG---- 178

Query: 188 MGGMGGMGGGFSQRSRTRAVPGEDDKVDLQLDFLEAVFGCSRELDVDRLTGCDECETTGV 367
                  GGG  + SR+RAV G+D+   L L+F EAVFG  +E+++ RL  C  CE +G 
Sbjct: 179 ------FGGGMGRGSRSRAVDGQDEYYTLILNFKEAVFGMEKEIEISRLESCGTCEGSGA 232

Query: 368 RKGTTPSTCPQCQGTGQVVSAVRTPLGTFQQVSLCPRCEGSGQISQPCTKCQGDGRVRET 547
           + GT P+ C  C G GQVVSA RTPLG FQQV  C  C G+G+IS PC  C GDGRVR+T
Sbjct: 233 KPGTKPTKCTTCGGQGQVVSAARTPLGVFQQVMTCSSCNGTGEISTPCGTCSGDGRVRKT 292

Query: 548 KRISLKVPAGVDAGSRLRVRGEGNSGRRGGEPGDLYVYITI 670
           KRISLKVPAGVD+GSRLRVRGEGN+G+RGG PGDL+V I +
Sbjct: 293 KRISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFVVIEV 333

>gb|AAP40480.1| putative DnaJ protein [Arabidopsis thaliana]
          Length = 442

 Score =  263 bits (671), Expect = 2e-69
 Identities = 130/221 (58%), Positives = 158/221 (70%)
 Frame = +2

Query: 8   FKKIGEAYEVLSDDNKKAIYDKYGEAGLRGGMGGMGGGPGVEFTNPFDLFESFFGGGMGG 187
           FK+I  AYEVLSDD KK++YD+YGEAGL+G   G G G   +F+NPFDLF+S F G    
Sbjct: 127 FKEISNAYEVLSDDEKKSLYDRYGEAGLKGA-AGFGNG---DFSNPFDLFDSLFEG---- 178

Query: 188 MGGMGGMGGGFSQRSRTRAVPGEDDKVDLQLDFLEAVFGCSRELDVDRLTGCDECETTGV 367
                  GGG  + SR+RAV G+D+   L L+F EAVFG  +E+++ RL  C  CE +G 
Sbjct: 179 ------FGGGMGRGSRSRAVDGQDEYYTLILNFKEAVFGMEKEIEISRLESCGTCEGSGA 232

Query: 368 RKGTTPSTCPQCQGTGQVVSAVRTPLGTFQQVSLCPRCEGSGQISQPCTKCQGDGRVRET 547
           + GT P+ C  C G GQVVSA RTPLG FQQV  C  C G+G+IS PC  C GDGRVR+T
Sbjct: 233 KPGTKPTKCTTCGGQGQVVSAARTPLGVFQQVMTCSSCNGTGEISTPCGTCSGDGRVRKT 292

Query: 548 KRISLKVPAGVDAGSRLRVRGEGNSGRRGGEPGDLYVYITI 670
           KRISLKVPAGVD+GSRLRVRGEGN+G+RGG PGDL+V I +
Sbjct: 293 KRISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFVVIEV 333



EST assemble image


clone accession position
1 LCL001d04_r AV626034 1 471
2 CM035g11_r AV388761 207 449
3 HCL022c01_r AV640774 213 672




Chlamydomonas reinhardtii
Kazusa DNA Research Institute