KCC001301A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001301A_C01 KCC001301A_c01
CTCAGTTGCACGTATAAACTTCAGTCTTTGTTACGCTTGCAGCAGAACCTCTTCTCGCGA
ACGCCGACACCTTTTGCAACACCTCGCTTCGTTCCTCTCCAAAGGACATTATGTGCGACA
GTCCGAATGCCCGCCTCGCTGTACTGGCGCGCCAGCTCTGTGCCGGCGGCCCTGGTGGCA
GCACTTGGGAGCACGTTCAGCAGGCCCCGCCGGACCCCATCATCGGCGTGAATGATTCGT
ACCGCGCGGATACCGACCCACGCAAACTCAACCTGGGCGTGGGAGCCTACCGCACCGAGG
AGGGCAAGCCCTACGTGCTGCGTGCCGTGCGCGAGGCTGAGGCGGCTCTGGCTGCCGACC
CCGCCGCCAACAAGGAGTACCTGCCCATTGCCGGCCTGCCCGAGTTCAATCGGCTGTCGC
GGGAGCTGGCGCTGGGCCCCAGCCACCCCGCCATCAGGGACGGCCGCGTGGCCACCGTGC
AGGCGCTGTCGGGCACGGGCGCGCTGCGTGTGGGTGCCGAGTTCCTGTGCTCAGCACCTG
CCGCCCGGCCAGCCGCGTGTCGGTGTACCTGCCCAACCCCACCGTGGGGCAACCACAAGA
CCATCTTCGGCAGGGCCGGCATGCAGGTGCGAGAGTACCGCTACTTTGACGCCACGACGC
GTGGCCTGGACTTCGCGGGCATGTGCGCCGACCTGTCTGCGGCGCCGCCCGGGGCCGTGC
TGCTGCTGCACGCCTGCGCGCACAACCCCACCGGCGTCGACCCCAGCCCGGAGCAGTGGC
GGCAGCTCCTGGCGCTGACGCAGGAGAGGAAGCTGCTGCCCTTCTTTGACAGCGCATACC
AGGGCTTCGCAAGCGGCGACCTGGACGCGGACGCCGCCAGTGTGCGGCTGTTTGCCAGCG
CGCCGGGGCCGCAGGAGATGGTGTTGGCGCAGTCGTTCGCCAAGAACATGGGGCTCTATG
GCGAGCGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001301A_C01 KCC001301A_c01
         (969 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAA63894.1| aspartate aminotransferase [Lotus corniculatus v...   309  4e-83
ref|NP_196713.1| aspartate aminotransferase, chloroplast (transa...   309  5e-83
pir||T06136 aspartate transaminase (EC 2.6.1.1) AAT1 peroxisomal...   306  3e-82
gb|AAC50015.1| aspartate aminotransferase cytosolic isozyme AAT2...   306  3e-82
sp|P37833|AATC_ORYSA Aspartate aminotransferase, cytoplasmic (Tr...   305  8e-82

>emb|CAA63894.1| aspartate aminotransferase [Lotus corniculatus var. japonicus]
          Length = 418

 Score =  309 bits (792), Expect = 4e-83
 Identities = 154/264 (58%), Positives = 189/264 (71%)
 Frame = +3

Query: 177 GSTWEHVQQAPPDPIIGVNDSYRADTDPRKLNLGVGAYRTEEGKPYVLRAVREAEAALAA 356
           GS + H+ +AP DPI+GV  ++  D  P KLNLGVGAYRTEEGKP VL  VR+A+  +  
Sbjct: 15  GSVFAHLVRAPEDPILGVTVAFNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAQHQIVN 74

Query: 357 DPAANKEYLPIAGLPEFNRLSRELALGPSHPAIRDGRVATVQALSGTGALRVGAEFLCSA 536
           DP+ NKEYLPI GL +FN+LS +L  G   PAI++ R+ TVQ LSGTG+LRVG EFL   
Sbjct: 75  DPSRNKEYLPIVGLADFNKLSAKLIFGADSPAIQENRITTVQCLSGTGSLRVGGEFLAKH 134

Query: 537 PAARPAACRCTCPTPPWGNHKTIFGRAGMQVREYRYFDATTRGLDFAGMCADLSAAPPGA 716
              R        P P WGNH  +F  AG+ V+ YRY+   TRGLDF G+  DL +AP G+
Sbjct: 135 YHQRIIYL----PKPTWGNHTKVFTLAGLSVKTYRYYAPATRGLDFQGLLEDLGSAPSGS 190

Query: 717 VLLLHACAHNPTGVDPSPEQWRQLLALTQERKLLPFFDSAYQGFASGDLDADAASVRLFA 896
           ++LLHACAHNPTGVDP+PEQW Q+  L + + LLPFFDSAYQGFASG+LDADA SVR F 
Sbjct: 191 IVLLHACAHNPTGVDPTPEQWEQIRQLIRSKALLPFFDSAYQGFASGNLDADAHSVRSFV 250

Query: 897 SAPGPQEMVLAQSFAKNMGLYGER 968
           +  G  E++ AQS+AKNMGLYGER
Sbjct: 251 ADGG--ELLAAQSYAKNMGLYGER 272

>ref|NP_196713.1| aspartate aminotransferase, chloroplast (transaminase A/Asp3)
           [Arabidopsis thaliana] gi|1168258|sp|P46644|AAT3_ARATH
           Aspartate aminotransferase, chloroplast precursor
           (Transaminase A) gi|11258882|pir||T48511 aspartate
           transaminase (EC 2.6.1.1) Asp3 F15N18.110 [similarity] -
           Arabidopsis thaliana gi|693692|gb|AAA79371.1| aspartate
           aminotransferase gi|7573409|emb|CAB87712.1| aspartate
           aminotransferase (Asp3) [Arabidopsis thaliana]
           gi|15292663|gb|AAK92700.1| putative aspartate
           aminotransferase Asp3 [Arabidopsis thaliana]
           gi|19310621|gb|AAL85041.1| putative aspartate
           aminotransferase ASP3 [Arabidopsis thaliana]
          Length = 449

 Score =  309 bits (791), Expect = 5e-83
 Identities = 161/283 (56%), Positives = 195/283 (68%)
 Frame = +3

Query: 120 SPNARLAVLARQLCAGGPGGSTWEHVQQAPPDPIIGVNDSYRADTDPRKLNLGVGAYRTE 299
           S +  L+ L     +GG GGS + H+ QAP DPI+GV  +Y  D  P KLNLGVGAYRTE
Sbjct: 27  SDSDNLSSLYASPTSGGTGGSVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTE 86

Query: 300 EGKPYVLRAVREAEAALAADPAANKEYLPIAGLPEFNRLSRELALGPSHPAIRDGRVATV 479
           EGKP VL  VR+AE  L  D    KEYLPI GL EFN+LS +L LG   PAIR+ R+ TV
Sbjct: 87  EGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTV 146

Query: 480 QALSGTGALRVGAEFLCSAPAARPAACRCTCPTPPWGNHKTIFGRAGMQVREYRYFDATT 659
           + LSGTG+LRVG EFL  A          T PT  WGNH  IF  AG+ V+ YRY+D  T
Sbjct: 147 ECLSGTGSLRVGGEFL--AKHYHQKTIYITQPT--WGNHPKIFTLAGLTVKTYRYYDPAT 202

Query: 660 RGLDFAGMCADLSAAPPGAVLLLHACAHNPTGVDPSPEQWRQLLALTQERKLLPFFDSAY 839
           RGL+F G+  DL AA PG+++LLHACAHNPTGVDP+ +QW Q+  L + + L+PFFDSAY
Sbjct: 203 RGLNFQGLLEDLGAAAPGSIVLLHACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAY 262

Query: 840 QGFASGDLDADAASVRLFASAPGPQEMVLAQSFAKNMGLYGER 968
           QGFASG LD DA  +R+F +  G  E ++AQS+AKNMGLYGER
Sbjct: 263 QGFASGSLDTDAKPIRMFVADGG--ECLVAQSYAKNMGLYGER 303

>pir||T06136 aspartate transaminase (EC 2.6.1.1) AAT1 peroxisomal/ glyoxysomal
           precursor - soybean gi|2654094|gb|AAC50014.1| aspartate
           aminotransferase glyoxysomal isozyme AAT1 precursor
           [Glycine max]
          Length = 456

 Score =  306 bits (785), Expect = 3e-82
 Identities = 154/263 (58%), Positives = 185/263 (69%)
 Frame = +3

Query: 180 STWEHVQQAPPDPIIGVNDSYRADTDPRKLNLGVGAYRTEEGKPYVLRAVREAEAALAAD 359
           S + H+ +AP DPI+GV  +Y  D  P KLNLGVGAYRTEEGKP VL  VR  E  L  D
Sbjct: 54  SVFNHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRRVEQQLIND 113

Query: 360 PAANKEYLPIAGLPEFNRLSRELALGPSHPAIRDGRVATVQALSGTGALRVGAEFLCSAP 539
            + NKEY+PI GL +FN+LS +L  G   PAI+D RV TVQ LSGTG+LRVG EFL    
Sbjct: 114 VSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQDNRVTTVQCLSGTGSLRVGGEFLAKHY 173

Query: 540 AARPAACRCTCPTPPWGNHKTIFGRAGMQVREYRYFDATTRGLDFAGMCADLSAAPPGAV 719
             R        PTP WGNH  +F  AG+ V+ YRY+   TRGLDF G+  DL +AP G++
Sbjct: 174 HQRTIYL----PTPTWGNHPKVFNLAGLSVKTYRYYAPATRGLDFQGLLEDLGSAPSGSI 229

Query: 720 LLLHACAHNPTGVDPSPEQWRQLLALTQERKLLPFFDSAYQGFASGDLDADAASVRLFAS 899
           +LLHACAHNPTGVDP+ EQW Q+  L + + LLPFFDSAYQGFASG LDADA  VRLF +
Sbjct: 230 VLLHACAHNPTGVDPTLEQWEQIRQLIRSKALLPFFDSAYQGFASGSLDADAQPVRLFVA 289

Query: 900 APGPQEMVLAQSFAKNMGLYGER 968
             G  E+++AQS+AKN+GLYGER
Sbjct: 290 DGG--ELLVAQSYAKNLGLYGER 310

>gb|AAC50015.1| aspartate aminotransferase cytosolic isozyme AAT2 [Glycine max]
          Length = 419

 Score =  306 bits (785), Expect = 3e-82
 Identities = 154/263 (58%), Positives = 185/263 (69%)
 Frame = +3

Query: 180 STWEHVQQAPPDPIIGVNDSYRADTDPRKLNLGVGAYRTEEGKPYVLRAVREAEAALAAD 359
           S + H+ +AP DPI+GV  +Y  D  P KLNLGVGAYRTEEGKP VL  VR  E  L  D
Sbjct: 17  SVFNHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRRVEQQLIND 76

Query: 360 PAANKEYLPIAGLPEFNRLSRELALGPSHPAIRDGRVATVQALSGTGALRVGAEFLCSAP 539
            + NKEY+PI GL +FN+LS +L  G   PAI+D RV TVQ LSGTG+LRVG EFL    
Sbjct: 77  VSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQDNRVTTVQCLSGTGSLRVGGEFLAKHY 136

Query: 540 AARPAACRCTCPTPPWGNHKTIFGRAGMQVREYRYFDATTRGLDFAGMCADLSAAPPGAV 719
             R        PTP WGNH  +F  AG+ V+ YRY+   TRGLDF G+  DL +AP G++
Sbjct: 137 HQRTIYL----PTPTWGNHPKVFNLAGLSVKTYRYYAPATRGLDFQGLLEDLGSAPSGSI 192

Query: 720 LLLHACAHNPTGVDPSPEQWRQLLALTQERKLLPFFDSAYQGFASGDLDADAASVRLFAS 899
           +LLHACAHNPTGVDP+ EQW Q+  L + + LLPFFDSAYQGFASG LDADA  VRLF +
Sbjct: 193 VLLHACAHNPTGVDPTLEQWEQIRQLIRSKALLPFFDSAYQGFASGSLDADAQPVRLFVA 252

Query: 900 APGPQEMVLAQSFAKNMGLYGER 968
             G  E+++AQS+AKN+GLYGER
Sbjct: 253 DGG--ELLVAQSYAKNLGLYGER 273

>sp|P37833|AATC_ORYSA Aspartate aminotransferase, cytoplasmic (Transaminase A)
           gi|2130066|pir||JC5124 aspartate transaminase (EC
           2.6.1.1), cytosolic - rice gi|287298|dbj|BAA03504.1|
           aspartate aminotransferase [Oryza sativa (japonica
           cultivar-group)] gi|14587300|dbj|BAB61211.1| aspartate
           aminotransferase [Oryza sativa (japonica
           cultivar-group)] gi|20804668|dbj|BAB92356.1| aspartate
           aminotransferase [Oryza sativa (japonica
           cultivar-group)] gi|32352184|dbj|BAC78585.1| aspartate
           aminotransferase [Oryza sativa (japonica
           cultivar-group)]
          Length = 407

 Score =  305 bits (781), Expect = 8e-82
 Identities = 155/263 (58%), Positives = 186/263 (69%)
 Frame = +3

Query: 180 STWEHVQQAPPDPIIGVNDSYRADTDPRKLNLGVGAYRTEEGKPYVLRAVREAEAALAAD 359
           S +  + QAP DPI+GV  +Y  D  P K+NLGVGAYRTEEGKP VL  VR AE  L  +
Sbjct: 5   SVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINN 64

Query: 360 PAANKEYLPIAGLPEFNRLSRELALGPSHPAIRDGRVATVQALSGTGALRVGAEFLCSAP 539
           P+  KEYLPI GL +FN+LS +L  G   PAI++ RVATVQ LSGTG+LRVG EFL    
Sbjct: 65  PSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHY 124

Query: 540 AARPAACRCTCPTPPWGNHKTIFGRAGMQVREYRYFDATTRGLDFAGMCADLSAAPPGAV 719
             R        P P WGNH  +F  AG+ VR YRY+D  TRGLDF G+  DL +AP GA+
Sbjct: 125 HERTIYI----PQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAI 180

Query: 720 LLLHACAHNPTGVDPSPEQWRQLLALTQERKLLPFFDSAYQGFASGDLDADAASVRLFAS 899
           +LLHACAHNPTGVDP+ +QW Q+  L + + LLPFFDSAYQGFASG LD DA SVR+F +
Sbjct: 181 VLLHACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVA 240

Query: 900 APGPQEMVLAQSFAKNMGLYGER 968
             G  E+++AQS+AKNMGLYGER
Sbjct: 241 DGG--ELLMAQSYAKNMGLYGER 261



EST assemble image


clone accession position
1 CM035g05_r AV388706 1 428
2 CM053h01_r AV389937 1 568
3 HC042h05_r AV635176 5 480
4 HC013h07_r AV632883 15 511
5 LCL007a06_r AV626326 19 158
6 CM075f04_r AV391613 23 599
7 MX225b04_r BP090520 24 326
8 MXL044b01_r BP095577 25 172
9 MXL044c08_r BP095591 27 404
10 HCL008a09_r AV639967 43 522
11 HCL085e08_r AV644287 44 674
12 HC008h03_r AV632489 72 572
13 HCL005g04_r AV639831 91 508
14 MX234a12_r BP091122 402 621
15 HCL013b09_r AV640254 517 980




Chlamydomonas reinhardtii
Kazusa DNA Research Institute