Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001294A_C01 KCC001294A_c01
(1168 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q39586|METE_CHLRE 5-methyltetrahydropteroyltriglutamate--homo... 702 0.0
ref|NP_681881.1| 5-methyltetrahydropteroyltriglutamate--homocyst... 423 e-117
gb|AAD00267.1| cobalamin independent methionine synthase [Chlamy... 417 e-115
ref|ZP_00073482.1| COG0620: Methionine synthase II (cobalamin-in... 410 e-113
ref|NP_457786.1| 5-methyltetrahydropteroyltriglutamate- homocyst... 402 e-111
>sp|Q39586|METE_CHLRE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
(Methionine synthase, vitamin-B12 independent isozyme)
(Cobalamin-independent methionine synthase)
gi|2129456|pir||S65083
5-methyltetrahydropteroyltriglutamate-homocysteine
S-methyltransferase (EC 2.1.1.14) - Chlamydomonas
reinhardtii gi|1017759|gb|AAC49178.1|
cobalamin-independent methionine synthase
gi|1587968|prf||2207381A Met synthase
Length = 814
Score = 702 bits (1812), Expect(2) = 0.0
Identities = 354/375 (94%), Positives = 358/375 (95%), Gaps = 1/375 (0%)
Frame = +2
Query: 47 SRPKPYDVR-REQQLQLPAFPTTTIGSFPQTAEVRRLRQQLKSGRLTQAEYEGLIAGHIA 223
S KPYDVR R++QLQL AFPTTTIGSFPQTAEVRRLRQQLKSGRLTQAEYEGLIAGHIA
Sbjct: 421 SAAKPYDVRARDEQLQLAAFPTTTIGSFPQTAEVRRLRQQLKSGRLTQAEYEGLIAGHIA 480
Query: 224 HAVGVQEALGIDVLVHGEAERTDMVEYFGMQLGGMLFTRAGWVQSYGSRCVRPPLVVDDI 403
HAVGVQEALGIDVLVHGEAERTDMVEYFGMQLGGMLFTRAGWVQSYGSRCVRPPLVVDDI
Sbjct: 481 HAVGVQEALGIDVLVHGEAERTDMVEYFGMQLGGMLFTRAGWVQSYGSRCVRPPLVVDDI 540
Query: 404 TYRGPMTCWEYKVASAYTRKPVKGMLTGPVTILNWSFPRKDISRAAQAMQLGLALRQEVA 583
TYRGP TCWEYKVA +PVKG+LTGPVTILNWSFPRKDISRAAQAMQLGLALRQEVA
Sbjct: 541 TYRGPSTCWEYKVAIPTAAQPVKGLLTGPVTILNWSFPRKDISRAAQAMQLGLALRQEVA 600
Query: 584 ALEAAGCTIIQVDDPALREGLPLKRERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSD 763
ALEAAGCTIIQVDDPALREGLPL ERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSD
Sbjct: 601 ALEAAGCTIIQVDDPALREGLPLNGERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSD 660
Query: 764 FQDILPAIDRMDADVLTIENSRSDNAMMAALAAAGYGRDIGPGVYDVHSPVVPSVEFIKS 943
FQDILPAIDRMDADVLTIENSRSD MMAALAAAGYGRDIGPGVYDVHSPVVPSVEFIKS
Sbjct: 661 FQDILPAIDRMDADVLTIENSRSDKPMMAALAAAGYGRDIGPGVYDVHSPVVPSVEFIKS 720
Query: 944 RIRSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAALRNMVEAAAQARAELQLAGGAAV 1123
RIRSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAAL NMVEAAAQARAELQLAGGAAV
Sbjct: 721 RIRSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAALANMVEAAAQARAELQLAGGAAV 780
Query: 1124 APVAGGVEAAGKGAA 1168
APV GGVEAAGKG A
Sbjct: 781 APVTGGVEAAGKGGA 795
Score = 38.1 bits (87), Expect(2) = 0.0
Identities = 16/18 (88%), Positives = 17/18 (93%)
Frame = +3
Query: 3 RAWRTTPPTSRLSGSAGR 56
RAWRTTPPTSRLSGSA +
Sbjct: 407 RAWRTTPPTSRLSGSAAK 424
>ref|NP_681881.1| 5-methyltetrahydropteroyltriglutamate--homocyste ine
S-methyltransferase [Thermosynechococcus elongatus BP-1]
gi|30173040|sp|Q8DJY0|METE_SYNEL
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (Methionine synthase, vitamin-B12
independent isozyme) (Cobalamin-independent methionine
synthase) gi|22294814|dbj|BAC08643.1|
5-methyltetrahydropteroyltriglutamate--homocyste ine
S-methyltransferase [Thermosynechococcus elongatus BP-1]
Length = 758
Score = 423 bits (1087), Expect = e-117
Identities = 214/350 (61%), Positives = 256/350 (73%)
Frame = +2
Query: 50 RPKPYDVRREQQLQLPAFPTTTIGSFPQTAEVRRLRQQLKSGRLTQAEYEGLIAGHIAHA 229
RP PY+ RR Q LP PTTTIGSFPQTAEVR+LR +LK +TQAEYE I IA
Sbjct: 406 RPLPYEQRRTLQPTLPPLPTTTIGSFPQTAEVRQLRVKLKRHEITQAEYEAAIDEEIAKC 465
Query: 230 VGVQEALGIDVLVHGEAERTDMVEYFGMQLGGMLFTRAGWVQSYGSRCVRPPLVVDDITY 409
V +QE +G+DVLVHGE ER+DMVE+FG QL G FT GWVQSYGSRCVRPP++ DI
Sbjct: 466 VRLQEEVGLDVLVHGEFERSDMVEFFGQQLSGFAFTEHGWVQSYGSRCVRPPIIYGDIAR 525
Query: 410 RGPMTCWEYKVASAYTRKPVKGMLTGPVTILNWSFPRKDISRAAQAMQLGLALRQEVAAL 589
PMT E+KVA + T K VK MLTGPVT++NWSF R DI R+ QAMQ+ LALR EVA L
Sbjct: 526 PQPMTVREFKVAQSLTDKIVKAMLTGPVTMINWSFTRTDIPRSEQAMQIALALRDEVADL 585
Query: 590 EAAGCTIIQVDDPALREGLPLKRERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSDFQ 769
EAAG +IQ+D+PALREGLPLK ERW YLSWAVDAFRL GVA TQ+ TH+CYS+F
Sbjct: 586 EAAGAKMIQIDEPALREGLPLKAERWNEYLSWAVDAFRLAAGVAKPETQIHTHMCYSEFG 645
Query: 770 DILPAIDRMDADVLTIENSRSDNAMMAALAAAGYGRDIGPGVYDVHSPVVPSVEFIKSRI 949
DI+ I+R+DADVL+IENSRS+N + + AGY +G GVYDVHSP VPSVE + ++
Sbjct: 646 DIIEHIERLDADVLSIENSRSNNETLFQITDAGYRHQVGVGVYDVHSPAVPSVEQLVQQL 705
Query: 950 RSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAALRNMVEAAAQARAEL 1099
R + + + ++IWVNPDCGLKTR W E I +L+NMVEA R E+
Sbjct: 706 R----TSVANLAPEQIWVNPDCGLKTRHWEEVIPSLKNMVEATKTIRQEV 751
>gb|AAD00267.1| cobalamin independent methionine synthase [Chlamydomonas moewusii]
Length = 707
Score = 417 bits (1071), Expect = e-115
Identities = 233/390 (59%), Positives = 264/390 (66%), Gaps = 8/390 (2%)
Frame = +2
Query: 23 ADIPAEWFSRPKPYDVRREQQLQLPAFPTTTIGSFPQTAEVRRLRQQLKSGRLTQAEYEG 202
A IPA+ F R + + VRR +Q Q AFPT+TIGSFPQTAEVRR R QL G LT +Y+
Sbjct: 312 AAIPADCFRRSEAFAVRRSKQPQFRAFPTSTIGSFPQTAEVRRARAQLTKGLLTLEQYQA 371
Query: 203 LIAGHIAHAVGVQEALGIDVLVHGEAERTDMVEYFGMQLGGML-FTRAGWVQSYGSRCVR 379
+ I HA+GVQE L IDVLVHGEAERTDMVEYFG QL G+ FT WVQSYGSR VR
Sbjct: 372 RMDALITHAIGVQEGLDIDVLVHGEAERTDMVEYFGEQLEGLTAFTANAWVQSYGSRYVR 431
Query: 380 PPLVVDDITYRGPMTC--WEYKVASAYTRKPVKGMLTGPVTILNWSFPRKDISRAAQAMQ 553
P VD PMT W A T + VKGMLTGPVTILNWSFPRKD+SR QAMQ
Sbjct: 432 PHHCVDVAC--APMTVREWRSSQTPACTGRFVKGMLTGPVTILNWSFPRKDVSRRVQAMQ 489
Query: 554 LGLALRQEVAALEAAGCTIIQVDDPALREGLPLKRERWASYLSWAVDAFRLCTGVAAAGT 733
L LA A C I+QVD+PALREGLPLK ERW SYL+WAVDAFRL T VA
Sbjct: 490 LALA-----CARRWTRCRIVQVDEPALREGLPLKNERWQSYLTWAVDAFRLSTAVARPDV 544
Query: 734 QVVTHLCYSDFQDILPAIDRMDADVLTIENSRSDNAMMAALAAAGYGRDIGPGVYDVHSP 913
Q+VTHLCYS+F+DIL A+D MDADVLTIENSRS + M+ AL+ AGY +D+GPGVYDVHSP
Sbjct: 545 QIVTHLCYSNFEDILQAVDDMDADVLTIENSRSGDEMVRALSNAGYCKDLGPGVYDVHSP 604
Query: 914 VVPSVEFIKSRIRSFVDS-GILSGRYDRIWVNPDCGLKTRGWPETIAALRNMVEAAAQAR 1090
VVP VE+ +I SFV + DR+WVNPDCGLKTR W E I ALRNMV+AA R
Sbjct: 605 VVPPVEWFVDKIASFVATCEQFKDCPDRLWVNPDCGLKTRAWSEVIPALRNMVQAAQIMR 664
Query: 1091 ----AELQLAGGAAVAPVAGGVEAAGKGAA 1168
+ +AG A P A AA
Sbjct: 665 ERHAKQQPVAGSGAATPTGVRRSALASAAA 694
>ref|ZP_00073482.1| COG0620: Methionine synthase II (cobalamin-independent)
[Trichodesmium erythraeum IMS101]
Length = 744
Score = 410 bits (1053), Expect = e-113
Identities = 203/351 (57%), Positives = 255/351 (71%)
Frame = +2
Query: 44 FSRPKPYDVRREQQLQLPAFPTTTIGSFPQTAEVRRLRQQLKSGRLTQAEYEGLIAGHIA 223
F R Y R + Q++LPAFPTTTIGSFPQT +VR+LR + K G LTQAEY I +IA
Sbjct: 398 FRRSMSYLERLDNQIKLPAFPTTTIGSFPQTKQVRKLRARYKKGELTQAEYLAQIDANIA 457
Query: 224 HAVGVQEALGIDVLVHGEAERTDMVEYFGMQLGGMLFTRAGWVQSYGSRCVRPPLVVDDI 403
+ +G+QE +G+DVLVHGE ER+DMVEYFG QL G FT GWVQSYGSR VRPP++ DI
Sbjct: 458 YCIGLQEGMGMDVLVHGEFERSDMVEYFGEQLDGYTFTTHGWVQSYGSRYVRPPIIFGDI 517
Query: 404 TYRGPMTCWEYKVASAYTRKPVKGMLTGPVTILNWSFPRKDISRAAQAMQLGLALRQEVA 583
MT E++VA + T KPVKGMLTGPVT+LNWS+PR DISR QA QL LA+R+E+
Sbjct: 518 YRPHAMTIREFEVAQSLTEKPVKGMLTGPVTMLNWSYPRTDISRQEQAFQLALAIREELK 577
Query: 584 ALEAAGCTIIQVDDPALREGLPLKRERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSD 763
LE AG IQVD+PA+REGLPLK++RW YL+WAVDAFRL T +A TQV TH+CYS+
Sbjct: 578 DLEKAGAAFIQVDEPAMREGLPLKQQRWHEYLNWAVDAFRLSTAIARPETQVHTHMCYSE 637
Query: 764 FQDILPAIDRMDADVLTIENSRSDNAMMAALAAAGYGRDIGPGVYDVHSPVVPSVEFIKS 943
F DI+ +I ++DADV++IE+SRS+N + L A Y +GPGVYDVHSP +P+ E+++
Sbjct: 638 FGDIMESIKQLDADVISIEDSRSNNETLMQLTDADYPAQVGPGVYDVHSPSIPTTEYLRE 697
Query: 944 RIRSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAALRNMVEAAAQARAE 1096
+ + ++ +IWVNPDCGLKTR W E I A RNMV+AA R E
Sbjct: 698 SLYKCIQYLPVT----QIWVNPDCGLKTRRWEEAIPATRNMVQAAISLRQE 744
>ref|NP_457786.1| 5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29143658|ref|NP_807000.1|
5-methyltetrahydropteroyltriglutamate- homocysteine
methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi Ty2] gi|30173098|sp|Q8Z3B6|METE_SALTI
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (Methionine synthase, vitamin-B12
independent isozyme) (Cobalamin-independent methionine
synthase) gi|25285967|pir||AI0916
5-methyltetrahydropteroyltriglutamate- homocysteine
methyltransferase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16504472|emb|CAD07927.1|
5-methyltetrahydropteroyltriglutamate- homocysteine
methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi] gi|29139293|gb|AAO70860.1|
5-methyltetrahydropteroyltriglutamate- homocysteine
methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
Length = 754
Score = 402 bits (1034), Expect = e-111
Identities = 209/364 (57%), Positives = 253/364 (69%), Gaps = 3/364 (0%)
Frame = +2
Query: 8 VEDHTADIPAEWFSRPKPYDVRREQQ---LQLPAFPTTTIGSFPQTAEVRRLRQQLKSGR 178
VE A I A+ R PY+VR E Q +LPA+PTTTIGSFPQT E+R LR K G
Sbjct: 392 VEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRGLRLDFKKGN 451
Query: 179 LTQAEYEGLIAGHIAHAVGVQEALGIDVLVHGEAERTDMVEYFGMQLGGMLFTRAGWVQS 358
L Y IA HI A+ QE LG+DVLVHGEAER DMVEYFG L G +FT+ GWVQS
Sbjct: 452 LDANNYRTGIAEHIKQAIIEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQS 511
Query: 359 YGSRCVRPPLVVDDITYRGPMTCWEYKVASAYTRKPVKGMLTGPVTILNWSFPRKDISRA 538
YGSRCV+PP+V+ DI+ P+T K A + T KPVKGMLTGPVTIL WSFPR+D++R
Sbjct: 512 YGSRCVKPPVVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVTRE 571
Query: 539 AQAMQLGLALRQEVAALEAAGCTIIQVDDPALREGLPLKRERWASYLSWAVDAFRLCTGV 718
A Q+ LALR EVA LEAAG IIQ+D+PALREGLPL+R W +YL W V+AFR+ V
Sbjct: 572 TIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLEWGVEAFRINAAV 631
Query: 719 AAAGTQVVTHLCYSDFQDILPAIDRMDADVLTIENSRSDNAMMAALAAAGYGRDIGPGVY 898
A TQ+ TH+CY +F DI+ +I +DADV+TIE SRSD ++ + A Y +IGPGVY
Sbjct: 632 AKDETQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEAFDYPNEIGPGVY 691
Query: 899 DVHSPVVPSVEFIKSRIRSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAALRNMVEAA 1078
D+HSP VPSVE+I++ ++ R+WVNPDCGLKTRGWPET AAL NMV+AA
Sbjct: 692 DIHSPNVPSVEWIEALLKKAAQ----RIPAQRLWVNPDCGLKTRGWPETRAALANMVKAA 747
Query: 1079 AQAR 1090
R
Sbjct: 748 HNLR 751
