Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001261A_C01 KCC001261A_c01
(1518 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_492814.1| alphafucosyltransferase (1L320) [Caenorhabditis... 42 0.038
pir||H87911 protein B0205.4 [imported] - Caenorhabditis elegans 42 0.038
dbj|BAB16493.1| P0665D10.19 [Oryza sativa (japonica cultivar-gro... 39 0.25
pir||T30257 IgG Fc binding protein - mouse (fragment) gi|3649748... 39 0.32
gb|AAH30871.1| A430096B05Rik protein [Mus musculus] 39 0.32
>ref|NP_492814.1| alphafucosyltransferase (1L320) [Caenorhabditis elegans]
gi|14530898|gb|AAC16988.2| Hypothetical protein B0205.4
[Caenorhabditis elegans]
Length = 435
Score = 41.6 bits (96), Expect = 0.038
Identities = 23/63 (36%), Positives = 31/63 (48%), Gaps = 1/63 (1%)
Frame = +3
Query: 1251 RQGVDVAGRA-NRLRGSCDTKSNDYKRRLPQEST*RFSVCISVCIHNTWWGRAELALGSS 1427
R G+D++ + NR+ G DT YKR + Q S +V +C N W R L LG
Sbjct: 300 RHGMDISMNSRNRIHGHVDTPIEYYKRAIQQISKIYENVAFIICSDNVAWARRNLKLGKE 359
Query: 1428 HLH 1436
LH
Sbjct: 360 TLH 362
>pir||H87911 protein B0205.4 [imported] - Caenorhabditis elegans
Length = 443
Score = 41.6 bits (96), Expect = 0.038
Identities = 23/63 (36%), Positives = 31/63 (48%), Gaps = 1/63 (1%)
Frame = +3
Query: 1251 RQGVDVAGRA-NRLRGSCDTKSNDYKRRLPQEST*RFSVCISVCIHNTWWGRAELALGSS 1427
R G+D++ + NR+ G DT YKR + Q S +V +C N W R L LG
Sbjct: 308 RHGMDISMNSRNRIHGHVDTPIEYYKRAIQQISKIYENVAFIICSDNVAWARRNLKLGKE 367
Query: 1428 HLH 1436
LH
Sbjct: 368 TLH 370
>dbj|BAB16493.1| P0665D10.19 [Oryza sativa (japonica cultivar-group)]
gi|21327947|dbj|BAC00540.1| P0489G09.8 [Oryza sativa
(japonica cultivar-group)]
Length = 332
Score = 38.9 bits (89), Expect = 0.25
Identities = 28/91 (30%), Positives = 36/91 (38%), Gaps = 2/91 (2%)
Frame = -1
Query: 348 RTYTHKDSTR--SQRLILKHGRACPAQKRAITSLHARPNMYRQAGLQPRWQRTALPPCPR 175
RT+T R R++L+H A P Q+R + H + R A PP P
Sbjct: 78 RTFTFSQLRRVPCMRVVLEHPSAIPCQRREASVWHPAERSMPLGARRRLRARLAGPPTPW 137
Query: 174 HPGTPPEAYKPSRRLVSTGDVVRVLRHQQLV 82
H P PSR+ S VV HQ V
Sbjct: 138 HGFVTPSGAPPSRQSRSRSAVVTARAHQLAV 168
>pir||T30257 IgG Fc binding protein - mouse (fragment)
gi|3649748|emb|CAA09618.1| IgG Fc binding protein [Mus
musculus]
Length = 1023
Score = 38.5 bits (88), Expect = 0.32
Identities = 24/62 (38%), Positives = 27/62 (42%)
Frame = -3
Query: 220 LAATMAAHSAAAMS*TSWHTAGGVQAIAPPRVDRRCCAGPPPPAACPIHAKLRRRIPLCC 41
LAA AA AA + W T G + P C GPP PA+CP A R P C
Sbjct: 622 LAAYAAACQAAGIKIEDWRTQAGCEITCPDNSHYELC-GPPCPASCPPPA--RHTAPTVC 678
Query: 40 HG 35
G
Sbjct: 679 DG 680
>gb|AAH30871.1| A430096B05Rik protein [Mus musculus]
Length = 1205
Score = 38.5 bits (88), Expect = 0.32
Identities = 24/62 (38%), Positives = 27/62 (42%)
Frame = -3
Query: 220 LAATMAAHSAAAMS*TSWHTAGGVQAIAPPRVDRRCCAGPPPPAACPIHAKLRRRIPLCC 41
LAA AA AA + W T G + P C GPP PA+CP A R P C
Sbjct: 125 LAAYAAACQAAGIKIEDWRTQAGCEITCPDNSHYELC-GPPCPASCPPPA--RHTAPTVC 181
Query: 40 HG 35
G
Sbjct: 182 DG 183
