Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001240A_C01 KCC001240A_c01
(571 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00091118.1| COG0532: Translation initiation factor 2 (IF-... 47 2e-04
dbj|BAB01598.1| unnamed protein product [Macaca fascicularis] 47 2e-04
ref|ZP_00091327.1| COG0493: NADPH-dependent glutamate synthase b... 47 2e-04
ref|ZP_00089739.1| COG2207: AraC-type DNA-binding domain-contain... 46 3e-04
ref|ZP_00092337.1| COG3712: Fe2+-dicitrate sensor, membrane comp... 45 5e-04
>ref|ZP_00091118.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Azotobacter vinelandii]
Length = 1459
Score = 47.0 bits (110), Expect = 2e-04
Identities = 48/142 (33%), Positives = 54/142 (37%), Gaps = 5/142 (3%)
Frame = +2
Query: 158 RPQQAGARAAHSGPGTGCSGRRQALPERDPQQRPVA*RHPAGDGRSPHVERHC-CTHLHL 334
RP+ G AH GPG R Q L P+ R RH GR P RH H H
Sbjct: 164 RPRAPGP--AHRGPG-----RSQRLRADRPRCRRAGGRHRRAQGRQPRAARHLRGQHRHP 216
Query: 335 EGCWHRPGP-PPVPVP*HRDRRQRASVRDAREGAGRP--REAGGGGRRGG-GQAKAPSAG 502
G PG V R RD G RP R GR GG G+ + P+A
Sbjct: 217 RGARRAPGRLAGAAVQRQCPGRVLPHRRDRHGGGRRPDDRHRAAAGRHGGAGRQRPPAAR 276
Query: 503 AVGRSLPSCSPPGAPVVAGQDP 568
G LP P A G+DP
Sbjct: 277 PTGAPLPVARRPKAD-GPGRDP 297
Score = 35.0 bits (79), Expect = 0.72
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -2
Query: 462 PPPPASRGRP-APSLASRTEAR*RRSRCHGTGTGGGPGRCQHPSRWRWVQQCRST*GDRP 286
P PPA GRP AP A R R +R R GR + ++ R + R G
Sbjct: 156 PAPPAGAGRPRAPGPAHRGPGRSQRLRADRPRCRRAGGRHRR-AQGRQPRAARHLRGQHR 214
Query: 285 SPAGCRYATGRCWGSRSGRAC 223
P G R A GR G+ R C
Sbjct: 215 HPRGARRAPGRLAGAAVQRQC 235
>dbj|BAB01598.1| unnamed protein product [Macaca fascicularis]
Length = 344
Score = 46.6 bits (109), Expect = 2e-04
Identities = 47/161 (29%), Positives = 59/161 (36%), Gaps = 14/161 (8%)
Frame = +2
Query: 131 CHRVQ-GRDHRPQQAGARAAHSGPGTGCSGRRQALPERDPQQRPVA*RHPAGDGRSPHVE 307
CH V R H+ + + +R LPER + PVA P G R
Sbjct: 67 CHAVLLARAHKARALARLLRQTALAAFSDFKRLQLPERCAPRAPVA--SPRGGRRRVGAP 124
Query: 308 RHCCTHLHLEGCWHRPGPPP----VPVP*HRDRRQ-RASVRDAREGAGRPREAGGGGRRG 472
R P PP V +P +R Q R + G GR GGGGRRG
Sbjct: 125 R--------------PAAPPAQCQVRLPAAAERAQPRGAAPQQHPGGGR--RGGGGGRRG 168
Query: 473 GGQAKAPSAGAVGRSLPS--------CSPPGAPVVAGQDPL 571
G + ++P A A G + P PGAP PL
Sbjct: 169 GARGRSPPARAAGGAQPGPGAEDVQPAGRPGAPTAGSAPPL 209
>ref|ZP_00091327.1| COG0493: NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Azotobacter vinelandii]
Length = 711
Score = 46.6 bits (109), Expect = 2e-04
Identities = 53/172 (30%), Positives = 69/172 (39%), Gaps = 28/172 (16%)
Frame = +2
Query: 131 CHRVQGRDHRPQQAGARAAH----SGPGTGCSGRRQALPERDPQQRPVA*RHPAGDGRSP 298
C R++G+ H +QAG A PG G S RQ LP R ++ V RH R
Sbjct: 14 CQRLRGQGHDRRQAGDSPAPGQRLQDPGLGHS--RQHLPVRRHRRPAVRRRHRRRALRRA 71
Query: 299 HVERHC--------CTHLHLEGCWHRPGPPPVPVP*HRDRRQRASVRDAR--EGAGRPRE 448
+ R C +H R GP + + DRR R R + G PR
Sbjct: 72 QLRRPCGGGGHRRPLLRVHDRRLRLRAGPDRLQLRLRHDRRLRLCARSGQRLRRPGEPRT 131
Query: 449 AGGGG-RRG--GGQAKAPSAGA-----VGRSLPSCSPPGAP------VVAGQ 562
G +RG GG ++ P+AGA R C P G P V+AGQ
Sbjct: 132 GGNAADQRGVHGGSSQPPAAGAGRVRGRDRQPVGCPPAGKPGRLPAHVLAGQ 183
>ref|ZP_00089739.1| COG2207: AraC-type DNA-binding domain-containing proteins
[Azotobacter vinelandii]
Length = 613
Score = 46.2 bits (108), Expect = 3e-04
Identities = 42/130 (32%), Positives = 47/130 (35%), Gaps = 5/130 (3%)
Frame = -2
Query: 546 GAPGGEQEGSDRPTAPAEGALA*PPPRRPPPPASRGRPAPSLASRTEAR*RRSRCHGTGT 367
GA GG+ + +P P A P R PP A R P P+ TG
Sbjct: 166 GAAGGDPVAAAQPAPPGPALPAGRRPLRDPPAAHRREPGPA----------------TGR 209
Query: 366 GGGPGRCQHPSRWRWVQQCRST*GDRPSPAGCRYATGRCWGSRSG--RACR---RPEHPV 202
G GPG R T G + PA AT R G R G R CR P P
Sbjct: 210 GNGPG--------------RRTPGAQDPPARRTPATRRQRGLRDGPRRGCRAVAAPPQPG 255
Query: 201 PGPECAARAP 172
PGP A P
Sbjct: 256 PGPRQAGPGP 265
>ref|ZP_00092337.1| COG3712: Fe2+-dicitrate sensor, membrane component [Azotobacter
vinelandii]
Length = 490
Score = 45.4 bits (106), Expect = 5e-04
Identities = 48/148 (32%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Frame = +2
Query: 149 RDHRPQQAGARAAHSGPGTGCSGRR--QALPERDPQ-QRPVA*RHPAGDG----RSPHVE 307
R HRP ++ RAA PG +R QA PE Q +RP R AG G +P
Sbjct: 8 RGHRPSRSSQRAAQPLPGPSPLAQRLAQAPPELPAQRRRPDPGRLRAGHGLPRSAAPRTA 67
Query: 308 RHCCTHLHLEGCWHRPGPPPVPVP*HRDRRQRASVRDAREGAGRPREAGGGGRRGGGQAK 487
H H + +P PPP +R R R+ R +R GA E G R G
Sbjct: 68 AGFPDH-HRQAAAVQPLPPPG----YRARLSRSPGRASRGGAA---ERGSPRHRHGDPV- 118
Query: 488 APSAGAVGRSLPSCSPPGAPVVAGQDPL 571
AGA R + PPG P+ + P+
Sbjct: 119 --GAGAAARGPAAAGPPGVPLRPARRPV 144
