KCC001228A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001228A_C01 KCC001228A_c01
TGCCTCCACCATCCGAGACGGTGGTGTCAGTGGACATCAGCACCATGAAGAAGGAGGACG
CCACCTTCACAGTGCCCTACGAGCTGACCATGACCCGCAACGACTACGTGCATGCACTGG
TGGGTTTCTTCGATGTGTCCTTTACGCGCGGCCACAAGCCCCTCAGCTTCACCACCTCGC
CGCGGGCCCGCGCCACGCACTGGAAGCAGACGGTGTTCTACCTTGGAGGACACGCTGATG
GCGAGCAAGGACGAGACCATCAGCGGCAAGCTTGAGTGCAAGCCCAACGCCAAGAACCCG
CGCGACCTGGACATCTCCATCGCCTACGAGTTCGAGGGCGAGCGGGGGCAAGTCAAGAAC
ACCCAGCAATACCGCATGCGCTAAGCCGCCATGTTGGTGCTTGCAGCGTGTGCCGGGAAA
GCGCGCGCGCGCTGTATCCGGGACCGACCTTGGCGCGTGGTGATAAGCGGCTGTACGTTG
GGGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001228A_C01 KCC001228A_c01
         (485 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO32621.1| CR061 protein [Chlamydomonas reinhardtii]              145  9e-61
gb|AAL36326.1| putative arginine methyltransferase pam1 [Arabido...    94  1e-29
ref|NP_194680.1| protein arginine N-methyltransferase, putative ...    94  1e-29
ref|NP_179557.1| protein arginine N-methyltransferase, putative ...    91  7e-27
pir||T52248 protein-arginine N-methyltransferase (EC 2.1.1.23) [...    94  5e-26

>gb|AAO32621.1| CR061 protein [Chlamydomonas reinhardtii]
          Length = 342

 Score =  145 bits (365), Expect(2) = 9e-61
 Identities = 69/70 (98%), Positives = 70/70 (99%)
 Frame = +3

Query: 15  ETVVSVDISTMKKEDATFTVPYELTMTRNDYVHALVGFFDVSFTRGHKPLSFTTSPRARA 194
           +TVVSVDISTMKKEDATFTVPYELTMTRNDYVHALVGFFDVSFTRGHKPLSFTTSPRARA
Sbjct: 221 QTVVSVDISTMKKEDATFTVPYELTMTRNDYVHALVGFFDVSFTRGHKPLSFTTSPRARA 280

Query: 195 THWKQTVFYL 224
           THWKQTVFYL
Sbjct: 281 THWKQTVFYL 290

 Score =  110 bits (274), Expect(2) = 9e-61
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +1

Query: 223 LEDTLMASKDETISGKLECKPNAKNPRDLDISIAYEFEGERGQVKNTQQYRMR 381
           LEDTLMASKDETISGKLECKPNAKNPRDLDISIAYEFEGERGQVKNTQQYRMR
Sbjct: 290 LEDTLMASKDETISGKLECKPNAKNPRDLDISIAYEFEGERGQVKNTQQYRMR 342

>gb|AAL36326.1| putative arginine methyltransferase pam1 [Arabidopsis thaliana]
          Length = 390

 Score = 93.6 bits (231), Expect(2) = 1e-29
 Identities = 42/71 (59%), Positives = 53/71 (74%)
 Frame = +3

Query: 12  SETVVSVDISTMKKEDATFTVPYELTMTRNDYVHALVGFFDVSFTRGHKPLSFTTSPRAR 191
           S  + ++DIS M   DA+FT P++L   RNDY+HALV +FDVSFT  HK L F+T P++R
Sbjct: 268 SRLLKTMDISKMSSGDASFTAPFKLVAQRNDYIHALVAYFDVSFTMCHKLLGFSTGPKSR 327

Query: 192 ATHWKQTVFYL 224
           ATHWKQTV YL
Sbjct: 328 ATHWKQTVLYL 338

 Score = 57.8 bits (138), Expect(2) = 1e-29
 Identities = 24/53 (45%), Positives = 34/53 (63%)
 Frame = +1

Query: 223 LEDTLMASKDETISGKLECKPNAKNPRDLDISIAYEFEGERGQVKNTQQYRMR 381
           LED L   + ETI+G +   PN KNPRD+DI ++Y   G+  ++  TQ Y+MR
Sbjct: 338 LEDVLTICEGETITGTMSVSPNKKNPRDIDIKLSYSLNGQHCKISRTQHYKMR 390

>ref|NP_194680.1| protein arginine N-methyltransferase, putative [Arabidopsis
           thaliana] gi|7488282|pir||T09914 protein-arginine
           N-methyltransferase (EC 2.1.1.23) - Arabidopsis thaliana
           gi|5123545|emb|CAB45311.1| arginine methyltransferase
           (pam1) [Arabidopsis thaliana] gi|7269850|emb|CAB79709.1|
           arginine methyltransferase (pam1) [Arabidopsis thaliana]
           gi|21593404|gb|AAM65371.1| arginine methyltransferase
           pam1 [Arabidopsis thaliana] gi|23297369|gb|AAN12952.1|
           arginine methyltransferase pam1 [Arabidopsis thaliana]
          Length = 390

 Score = 93.6 bits (231), Expect(2) = 1e-29
 Identities = 42/71 (59%), Positives = 53/71 (74%)
 Frame = +3

Query: 12  SETVVSVDISTMKKEDATFTVPYELTMTRNDYVHALVGFFDVSFTRGHKPLSFTTSPRAR 191
           S  + ++DIS M   DA+FT P++L   RNDY+HALV +FDVSFT  HK L F+T P++R
Sbjct: 268 SRLLKTMDISKMSSGDASFTAPFKLVAQRNDYIHALVAYFDVSFTMCHKLLGFSTGPKSR 327

Query: 192 ATHWKQTVFYL 224
           ATHWKQTV YL
Sbjct: 328 ATHWKQTVLYL 338

 Score = 57.8 bits (138), Expect(2) = 1e-29
 Identities = 24/53 (45%), Positives = 34/53 (63%)
 Frame = +1

Query: 223 LEDTLMASKDETISGKLECKPNAKNPRDLDISIAYEFEGERGQVKNTQQYRMR 381
           LED L   + ETI+G +   PN KNPRD+DI ++Y   G+  ++  TQ Y+MR
Sbjct: 338 LEDVLTICEGETITGTMSVSPNKKNPRDIDIKLSYSLNGQHCKISRTQHYKMR 390

>ref|NP_179557.1| protein arginine N-methyltransferase, putative [Arabidopsis
           thaliana] gi|25411923|pir||F84579 probable arginine
           N-methyltransferase [imported] - Arabidopsis thaliana
           gi|3687250|gb|AAC62148.1| putative arginine
           N-methyltransferase [Arabidopsis thaliana]
           gi|30102762|gb|AAP21299.1| At2g19670 [Arabidopsis
           thaliana]
          Length = 366

 Score = 91.3 bits (225), Expect(2) = 7e-27
 Identities = 40/71 (56%), Positives = 54/71 (75%)
 Frame = +3

Query: 12  SETVVSVDISTMKKEDATFTVPYELTMTRNDYVHALVGFFDVSFTRGHKPLSFTTSPRAR 191
           S+ + ++DIS M   DA+FT P++L   RND++HALV +FDVSFT  HK + F+T P++R
Sbjct: 244 SKLLKTMDISKMAAGDASFTAPFKLVAQRNDHIHALVAYFDVSFTMCHKKMGFSTGPKSR 303

Query: 192 ATHWKQTVFYL 224
           ATHWKQTV YL
Sbjct: 304 ATHWKQTVLYL 314

 Score = 50.4 bits (119), Expect(2) = 7e-27
 Identities = 22/53 (41%), Positives = 31/53 (57%)
 Frame = +1

Query: 223 LEDTLMASKDETISGKLECKPNAKNPRDLDISIAYEFEGERGQVKNTQQYRMR 381
           LED L   + ETI+G +    N KNPRD+DI ++Y   G+   +  T  Y+MR
Sbjct: 314 LEDVLTICEGETITGSMTIAQNKKNPRDVDIKLSYSLNGQHCNISRTHFYKMR 366

>pir||T52248 protein-arginine N-methyltransferase (EC 2.1.1.23) [imported] -
           Arabidopsis thaliana (fragment)
           gi|3292849|emb|CAA07570.1| arginine methyltransferase
           [Arabidopsis thaliana]
          Length = 376

 Score = 93.6 bits (231), Expect(2) = 5e-26
 Identities = 42/71 (59%), Positives = 53/71 (74%)
 Frame = +3

Query: 12  SETVVSVDISTMKKEDATFTVPYELTMTRNDYVHALVGFFDVSFTRGHKPLSFTTSPRAR 191
           S  + ++DIS M   DA+FT P++L   RNDY+HALV +FDVSFT  HK L F+T P++R
Sbjct: 268 SRLLKTMDISKMSSGDASFTAPFKLVAQRNDYIHALVAYFDVSFTMCHKLLGFSTGPKSR 327

Query: 192 ATHWKQTVFYL 224
           ATHWKQTV YL
Sbjct: 328 ATHWKQTVLYL 338

 Score = 45.4 bits (106), Expect(2) = 5e-26
 Identities = 19/39 (48%), Positives = 25/39 (63%)
 Frame = +1

Query: 223 LEDTLMASKDETISGKLECKPNAKNPRDLDISIAYEFEG 339
           LED L   + ETI+G +   PN KNPRD+DI ++Y   G
Sbjct: 338 LEDVLTICEGETITGTMSVSPNKKNPRDIDIKLSYSLNG 376



EST assemble image


clone accession position
1 HC068f10_r AV637100 1 540
2 CM027g11_r AV387662 10 591




Chlamydomonas reinhardtii
Kazusa DNA Research Institute