Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001219A_C01 KCC001219A_c01
(609 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis tha... 194 1e-48
ref|NP_179632.1| succinyl-CoA ligase beta subunit [Arabidopsis t... 194 1e-48
gb|AAO22150.1| succinyl CoA ligase beta subunit [Lycopersicon es... 192 3e-48
gb|AAO51536.1| similar to Mus musculus (Mouse). 16 days embryo h... 139 2e-32
gb|AAP83351.1| succinyl-CoA synthetase, beta subunit [Neocallima... 136 2e-31
>gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
Length = 421
Score = 194 bits (492), Expect = 1e-48
Identities = 96/173 (55%), Positives = 132/173 (75%)
Frame = +2
Query: 68 LTGKLLKQATGSLAALSQCQQLRFFNVHEYQGAQIMSKFGVNVPPGIPATTLDEVKKAVD 247
L KL+ ++ S++ Q QQLR N+HEYQGA++M K+GVNVP G+ A++L+EVKKA+
Sbjct: 4 LVNKLVSRSL-SISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQ 62
Query: 248 QMADEKGEVVIKSQILAGGRGLGKFTNGLQGGVHIVPKAKALELAKQMLGATLVTKQTGP 427
+ + E+V+KSQILAGGRGLG F +GL+GGVHIV + +A E+A +MLG LVTKQTGP
Sbjct: 63 DVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGP 122
Query: 428 AGKPVNTLLIAKKMKLKREMYFAILLDRKTAGPMMIGCSEGRDSIDDLAEKSP 586
GK V+ + + +K+ L EMYF+I+LDRK+AGP++I C +G SI+DLAEK P
Sbjct: 123 QGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFP 175
>ref|NP_179632.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
gi|21264030|sp|O82662|SUCB_ARATH Succinyl-CoA ligase
[GDP-forming] beta-chain, mitochondrial precursor
(Succinyl-CoA synthetase, beta chain) (SCS-beta)
gi|11272036|pir||T51809 succinate-CoA ligase
(ADP-forming) (EC 6.2.1.5) beta chain [imported] -
Arabidopsis thaliana gi|3660469|emb|CAA05024.1|
succinyl-CoA-ligase beta subunit [Arabidopsis thaliana]
gi|20197853|gb|AAM15283.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
gi|20466482|gb|AAM20558.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
gi|22136422|gb|AAM91289.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
Length = 421
Score = 194 bits (492), Expect = 1e-48
Identities = 96/173 (55%), Positives = 132/173 (75%)
Frame = +2
Query: 68 LTGKLLKQATGSLAALSQCQQLRFFNVHEYQGAQIMSKFGVNVPPGIPATTLDEVKKAVD 247
L KL+ ++ S++ Q QQLR N+HEYQGA++M K+GVNVP G+ A++L+EVKKA+
Sbjct: 4 LVNKLVSRSL-SISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQ 62
Query: 248 QMADEKGEVVIKSQILAGGRGLGKFTNGLQGGVHIVPKAKALELAKQMLGATLVTKQTGP 427
+ + E+V+KSQILAGGRGLG F +GL+GGVHIV + +A E+A +MLG LVTKQTGP
Sbjct: 63 DVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGP 122
Query: 428 AGKPVNTLLIAKKMKLKREMYFAILLDRKTAGPMMIGCSEGRDSIDDLAEKSP 586
GK V+ + + +K+ L EMYF+I+LDRK+AGP++I C +G SI+DLAEK P
Sbjct: 123 QGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFP 175
>gb|AAO22150.1| succinyl CoA ligase beta subunit [Lycopersicon esculentum]
Length = 417
Score = 192 bits (488), Expect = 3e-48
Identities = 97/170 (57%), Positives = 125/170 (73%)
Frame = +2
Query: 77 KLLKQATGSLAALSQCQQLRFFNVHEYQGAQIMSKFGVNVPPGIPATTLDEVKKAVDQMA 256
KL Q+ S+A Q QQLR N+HEYQGA++MSK+G+NVP G+ +LDEVKKA+ +
Sbjct: 4 KLANQSL-SVAGKWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAVASLDEVKKAIQDVF 62
Query: 257 DEKGEVVIKSQILAGGRGLGKFTNGLQGGVHIVPKAKALELAKQMLGATLVTKQTGPAGK 436
+ EVV+KSQ+LAGGRGLG F NG QGGVHIV +A ++A +MLG LVTKQTG GK
Sbjct: 63 PNQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQAEDIASKMLGQILVTKQTGAQGK 122
Query: 437 PVNTLLIAKKMKLKREMYFAILLDRKTAGPMMIGCSEGRDSIDDLAEKSP 586
V+ + + +KM L EMYF+I+LDR TAGP++I C +G SI+DLAEK P
Sbjct: 123 VVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFP 172
>gb|AAO51536.1| similar to Mus musculus (Mouse). 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130090E04
product:succinate-Coenzyme A ligase, ADP-forming, beta
subunit, full insert sequence [Dictyostelium discoideum]
Length = 445
Score = 139 bits (351), Expect = 2e-32
Identities = 75/173 (43%), Positives = 111/173 (63%), Gaps = 1/173 (0%)
Frame = +2
Query: 71 TGKLLKQATGSLAALSQCQQLRFFNVHEYQGAQIMSKFGVNVPPGIPATTLDEVKKAVDQ 250
+ K LK + + S Q RF NVHEYQ ++M +G+N P G A T +E +K +
Sbjct: 12 SSKNLKSLVLNKSTSSLVYQKRFLNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAEV 71
Query: 251 MADEKGEVVIKSQILAGGRGLGKFTNGLQGGVHIVPKAKALE-LAKQMLGATLVTKQTGP 427
M + ++V+K+Q+LAGGRG G FT+GL+GGV + A+ ++ A +MLG TLVTKQTG
Sbjct: 72 MNTQ--DLVVKAQVLAGGRGKGIFTSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGE 129
Query: 428 AGKPVNTLLIAKKMKLKREMYFAILLDRKTAGPMMIGCSEGRDSIDDLAEKSP 586
GK V+ + + ++ L++EMYFAIL+DRK GP+M+ EG I+ +A +P
Sbjct: 130 DGKVVHQVYVTERHFLRKEMYFAILMDRKAGGPVMVASPEGGVDIEGVARDNP 182
>gb|AAP83351.1| succinyl-CoA synthetase, beta subunit [Neocallimastix patriciarum]
Length = 436
Score = 136 bits (343), Expect = 2e-31
Identities = 71/167 (42%), Positives = 110/167 (65%), Gaps = 1/167 (0%)
Frame = +2
Query: 89 QATGSLAALSQCQQLRFFNVHEYQGAQIMSKFGVNVPPGIPATTLDEVKKAVDQMADEKG 268
+A +LA+++Q Q RF +VHEY ++ ++ VN P GI A T +E +A ++ E
Sbjct: 11 KAAPALASIAQTAQKRFLSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKLNTE-- 68
Query: 269 EVVIKSQILAGGRGLGKFTNGLQGGVHIVPKAKAL-ELAKQMLGATLVTKQTGPAGKPVN 445
++VIK+Q+LAGGRG G F +GLQGGV + + + + A +MLG L+TKQTG AG+ N
Sbjct: 69 DLVIKAQVLAGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCN 128
Query: 446 TLLIAKKMKLKREMYFAILLDRKTAGPMMIGCSEGRDSIDDLAEKSP 586
+ + ++ +RE YFAILLDR T GP+++ SEG I+++A+ +P
Sbjct: 129 AVYVVERQYARREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNP 175
