Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001204A_C01 KCC001204A_c01
(1111 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00014374.1| hypothetical protein [Rhodospirillum rubrum] 38 0.36
gb|EAA37996.1| GLP_195_19993_12032 [Giardia lamblia ATCC 50803] 36 1.4
dbj|BAA77511.2| hyperpolarization activated cation channel [Oryc... 35 1.8
pir||T09578 nuclear protein JUS1 - dinoflagellate (Crypthecodini... 35 1.8
gb|EAA20278.1| hypothetical protein [Plasmodium yoelii yoelii] 35 1.8
>ref|ZP_00014374.1| hypothetical protein [Rhodospirillum rubrum]
Length = 390
Score = 37.7 bits (86), Expect = 0.36
Identities = 25/66 (37%), Positives = 30/66 (44%), Gaps = 2/66 (3%)
Frame = -3
Query: 878 PAPLWHV*PARLKRSRAGPAYTARMCARCSRTQQTLAPATPFPRSTVSGSR--PPCPATR 705
P PLW PA + RAGP + M + C + TVSGSR PP P +
Sbjct: 62 PGPLWQAAPAGMMTGRAGPPWF--MASPC------------YAGPTVSGSRKEPPAPRRQ 107
Query: 704 PCSPRA 687
P PRA
Sbjct: 108 PGGPRA 113
>gb|EAA37996.1| GLP_195_19993_12032 [Giardia lamblia ATCC 50803]
Length = 2653
Score = 35.8 bits (81), Expect = 1.4
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = -2
Query: 942 AVRHSASCNFHQYTDTASS---RGACTTLARVTRTTKTLQGWPCLHRAHVCKV*QDAADP 772
A+R S++C H + +S G C A +T T QG + Q + +P
Sbjct: 1095 ALRSSSACYNHLESSPLTSVKINGVCIDTAAITLKTTEAQG---------LSMSQFSKNP 1145
Query: 771 GASHAVSTQHCEWVQAAMPRNQALLPTSIKARRS-GIQSQSIPNPVMVSATSSN-IQSNP 598
G S + + ++A + + TSIK R++ S S + + +S ++ + + P
Sbjct: 1146 GTSQSAKSYPAGTTESAETSENSFVTTSIKQRKAFNFDSNSDQSDISISDINNTLVATEP 1205
Query: 597 RPRSSASVTE 568
+ ++ VTE
Sbjct: 1206 ESKDTSDVTE 1215
>dbj|BAA77511.2| hyperpolarization activated cation channel [Oryctolagus cuniculus]
Length = 1175
Score = 35.4 bits (80), Expect = 1.8
Identities = 25/85 (29%), Positives = 35/85 (40%), Gaps = 1/85 (1%)
Frame = -3
Query: 959 TP*VP*PCDTQPPATSINTLIQHHLAAPAPLWHV*PARLKRSRAGPAYTARMCARCSRTQ 780
TP + P TS+ + HH PA ++ P G T R R
Sbjct: 772 TPLIQAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGPTTLGSLGAGQTPRHLRRL---- 827
Query: 779 QTLAPATPFPRSTVSG-SRPPCPAT 708
Q+LAP+ P P S S S+P P++
Sbjct: 828 QSLAPSAPSPASPASSPSQPDTPSS 852
>pir||T09578 nuclear protein JUS1 - dinoflagellate (Crypthecodinium cohnii)
gi|2546900|emb|CAA05136.1| JUS1 [Crypthecodinium cohnii]
Length = 376
Score = 35.4 bits (80), Expect = 1.8
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
Frame = -1
Query: 835 PGLALPTPRACVQGVAGRSRPWRQPRRFHAAL*VGPGRHAPQPGPAPHEHKSQALRHPKS 656
P LP+P C+ GR W R++ G Q P QA+RHPKS
Sbjct: 136 PSGNLPSP--CIPNGYGRITEWLM-RKY--------GTTREQVAMVPVLMSRQAIRHPKS 184
Query: 655 INSKPCNGKRNLLKHTEQP*TTQQRICYGKSG-VFTVAIDSFCPH-HYQTWAAPVPNSG 485
+ + + L P TT +G G F VA DSF WA+P+ G
Sbjct: 185 LTREAHTLEDVLSSKPIAPSTTLLECTHGDGGAAFIVASDSFVERLQRNIWASPLVKKG 243
>gb|EAA20278.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 598
Score = 35.4 bits (80), Expect = 1.8
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Frame = -3
Query: 854 PARLKRSRAGPAYTARMCARCSRT-QQTLAPATPFPRSTVSGSRPPCP-------ATRPC 699
P R+ AG A R RT ++T AP TP PR PCP A RP
Sbjct: 17 PHPAPRASAGDASHRRSACPARRTPRRTRAPGTPGPRGRHRAGSAPCPDGSRPAAAPRPS 76
Query: 698 SPRA*KPGAQA 666
P A P QA
Sbjct: 77 PPHAPAPPLQA 87
