KCC001185A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001185A_C01 KCC001185A_c01
CAAAACAAAAGCAATCTGTGCGTGCTTGCGAGACGCGCCCTTTCAGCATCCAAGTCAGCT
TGTCACTCCCGTGAAACCAGTCAAAATGTCGTGCGACTGCTCCATCACCTTCAACTTCTC
GATGAAAAAGCAGGGGCGACCCCCACGTCCGCTGCGTGCATGTGGACGTTGGGTCTCATC
GTCGCCGGCTCCATAATCGCTTTTCGGCGCGCTCCGGCTCGATTCAGAATGAGTGCCGTA
ACGAAGACCCGACGCTCCTTGGCCGGCATCAATGGTTTCTCCTCGGTTCTTTCTTGCAAG
AAGCTGTACCGCTACTACTGGTTCATCACCTCCCTGGCCTTCGTCACCGCTGCGTACGGC
CTGTGGGTGTCGGCCACTGGCGCGCTGGCTTCTAGCCGTGGCTCCGTGATGGGCCTGCTT
GTCGTCGCCTGCCTTCTGACCATCAACATGACCGAGGCCTTCTACGGCGTCATGGACGTG
TCCAAGTTTGAGAACGGCACTGCGCGCCGACCGCTCCCGCACCATGTACGCCGGCTGCAT
CATCACTGCGGTGTTCCAGGCCTTGGGCATCATCGTGGTGAGCATGGAGCAGGGCTCTGT
CGAGGCGATCACCGGCAAGCCCGTCGTGGAGAAGGGCGCCAAGAAGGAAATTGAGGTTGT
CG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001185A_C01 KCC001185A_c01
         (662 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAA36487.1| profilaggrin                                            44  0.002
gb|AAA63244.1| profilaggrin                                            44  0.002
pir||A35938 profilaggrin - human (fragments)                           43  0.004
ref|XP_048104.2| similar to profilaggrin - human (fragments) [Ho...    42  0.011
gb|AAA63246.1| profilaggrin                                            41  0.014

>gb|AAA36487.1| profilaggrin
          Length = 1218

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGHVDGQKAGDDKQAHHGATARSQRASGR---------HPQA 358
            S+R + +  G    AV   GH   + +    Q  H   + SQ  S +         H ++
Sbjct: 1042 SSRHSAIGRGQASSAVRDRGHRGSRGSQASDQEGHSEDSDSQSVSAQRQAGSHQQSHQES 1101

Query: 357  VRSGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAGDD 178
             R   +G+ G       Q+   +         + ++G R G+H E +R + +        
Sbjct: 1102 TRGRSQGRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQ 1161

Query: 177  ETQRPHARSGRGGR 136
            +T R H  S RGGR
Sbjct: 1162 DTIRAHPGSRRGGR 1175

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 33/136 (24%), Positives = 52/136 (37%), Gaps = 11/136 (8%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR---------HP 364
            S+R + +  G    AV   GH    G +A D  Q  H   + SQ  SG+         H 
Sbjct: 718  SSRHSGIGHGQASSAVRDSGHRGYSGSQASD--QEGHSENSDSQSVSGQRQARSHQQSHQ 775

Query: 363  QAVRSGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAG 184
            ++ R    G+ G       Q+   +           ++  R G+H + +R + +      
Sbjct: 776  ESTRGQSRGRSGRSGSFLYQVSTHEQSESAHGRSAPSTRRRQGSHHDQARDSSRHSASQE 835

Query: 183  DDETQRPHARSGRGGR 136
              +T R H  S RGGR
Sbjct: 836  GQDTIRGHPGSSRGGR 851

 Score = 34.7 bits (78), Expect = 1.3
 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 9/117 (7%)
 Frame = -3

Query: 462 EGLGHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNR 283
           EG      + +G   + HHG+     R   RHP   RS DE +            +    
Sbjct: 304 EGHSEDSERHSGSASRNHHGSAWEQSRDGSRHP---RSHDEDRASHGHSADSSRQSGTRH 360

Query: 282 GETIDAGQGAS---------GLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGG 139
            ET   GQ AS         G R+G+H + S  + +   G G  +     + SG  G
Sbjct: 361 AETSSRGQTASSHEQARSSAGERHGSHHQQSADSSRHS-GIGHGQASTAVSDSGHRG 416

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 33/139 (23%), Positives = 47/139 (33%), Gaps = 19/139 (13%)
 Frame = -3

Query: 453  GHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRGET 274
            GH    ++      HH   +   +A+    QA  S  E  G        Q  A  +R   
Sbjct: 669  GHRQSAESSSQSGTHHAENSSGGQAASSQEQARSSAGERHGSGH-----QQSADSSRHSG 723

Query: 273  IDAGQGASGLRYGTHSESSRSAPKSDYGAGDDETQ---------RPHARS---------- 151
            I  GQ +S +R   H   S S      G  ++            R H +S          
Sbjct: 724  IGHGQASSAVRDSGHRGYSGSQASDQEGHSENSDSQSVSGQRQARSHQQSHQESTRGQSR 783

Query: 150  GRGGRPCFFIEKLKVMEQS 94
            GR GR   F+ ++   EQS
Sbjct: 784  GRSGRSGSFLYQVSTHEQS 802

 Score = 32.0 bits (71), Expect = 8.5
 Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
 Frame = -3

Query: 432 AGDDKQAHHGATARSQRASG-RHPQAVR----SGDEGQGGDEPVVAVQLLARKNRGETID 268
           AG+   +HH  +A S R SG  H QA      SG  G  G +        A  N G + D
Sbjct: 380 AGERHGSHHQQSADSSRHSGIGHGQASTAVSDSGHRGYRGSQ--------ASDNEGHSED 431

Query: 267 ------AGQGASGLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGGRPCFFIEKLKV 106
                 AGQ  +  R+ +H ES+R               R    SGR G   + +   + 
Sbjct: 432 SDSQSVAGQRQARSRHQSHQESTRG--------------RSRGGSGRSGSFLYQVSTHEQ 477

Query: 105 MEQSHDILTGFTG 67
            E SH      TG
Sbjct: 478 SESSHGWARTSTG 490

>gb|AAA63244.1| profilaggrin
          Length = 990

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGHVDGQKAGDDKQAHHGATARSQRASGR---------HPQA 358
            S+R + +  G    AV   GH   + +    Q  H   + SQ  S +         H ++
Sbjct: 820  SSRHSAIGRGQASSAVRDRGHRGSRGSQASDQEGHSEDSDSQSVSAQRQAGSHQQSHQES 879

Query: 357  VRSGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAGDD 178
             R   +G+ G       Q+   +         + ++G R G+H E +R + +        
Sbjct: 880  TRGRSQGRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQ 939

Query: 177  ETQRPHARSGRGGR 136
            +T R H  S RGGR
Sbjct: 940  DTIRAHPGSRRGGR 953

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 33/136 (24%), Positives = 52/136 (37%), Gaps = 11/136 (8%)
 Frame = -3

Query: 510 SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR---------HP 364
           S+R + +  G    AV   GH    G +A D  Q  H   + SQ  SG+         H 
Sbjct: 496 SSRHSGIGHGQASSAVRDSGHRGYSGSQASD--QEGHSENSDSQSVSGQRQARSHQQSHQ 553

Query: 363 QAVRSGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAG 184
           ++ R    G+ G       Q+   +           ++  R G+H + +R + +      
Sbjct: 554 ESTRGQSRGRSGRSGSFLYQVSTHEQSESAHGRSAPSTRRRQGSHHDQARDSSRHSASQE 613

Query: 183 DDETQRPHARSGRGGR 136
             +T R H  S RGGR
Sbjct: 614 GQDTIRGHPGSSRGGR 629

 Score = 33.9 bits (76), Expect = 2.2
 Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 11/116 (9%)
 Frame = -3

Query: 453 GHVDGQK--AGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRG 280
           GH +  +  +G   + HHG+     R   RHP   RS DE +            +     
Sbjct: 83  GHSEDSERHSGSASRNHHGSAWEQSRDGSRHP---RSHDEDRASHGHSADSSRQSGTRHA 139

Query: 279 ETIDAGQGAS---------GLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGG 139
           ET   GQ AS         G R+G+H + S  + +   G G  +     + SG  G
Sbjct: 140 ETSSRGQTASSHEQARSSAGERHGSHHQQSADSSRHS-GIGHGQASTAVSDSGHRG 194

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 33/139 (23%), Positives = 47/139 (33%), Gaps = 19/139 (13%)
 Frame = -3

Query: 453 GHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRGET 274
           GH    ++      HH   +   +A+    QA  S  E  G        Q  A  +R   
Sbjct: 447 GHRQSAESSSQSGTHHAENSSGGQAASSQEQARSSAGERHGSGH-----QQSADSSRHSG 501

Query: 273 IDAGQGASGLRYGTHSESSRSAPKSDYGAGDDETQ---------RPHARS---------- 151
           I  GQ +S +R   H   S S      G  ++            R H +S          
Sbjct: 502 IGHGQASSAVRDSGHRGYSGSQASDQEGHSENSDSQSVSGQRQARSHQQSHQESTRGQSR 561

Query: 150 GRGGRPCFFIEKLKVMEQS 94
           GR GR   F+ ++   EQS
Sbjct: 562 GRSGRSGSFLYQVSTHEQS 580

 Score = 32.0 bits (71), Expect = 8.5
 Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
 Frame = -3

Query: 432 AGDDKQAHHGATARSQRASG-RHPQAVR----SGDEGQGGDEPVVAVQLLARKNRGETID 268
           AG+   +HH  +A S R SG  H QA      SG  G  G +        A  N G + D
Sbjct: 158 AGERHGSHHQQSADSSRHSGIGHGQASTAVSDSGHRGYRGSQ--------ASDNEGHSED 209

Query: 267 ------AGQGASGLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGGRPCFFIEKLKV 106
                 AGQ  +  R+ +H ES+R               R    SGR G   + +   + 
Sbjct: 210 SDSQSVAGQRQARSRHQSHQESTRG--------------RSRGGSGRSGSFLYQVSTHEQ 255

Query: 105 MEQSHDILTGFTG 67
            E SH      TG
Sbjct: 256 SESSHGWARTSTG 268

>pir||A35938 profilaggrin - human (fragments)
          Length = 2248

 Score = 43.1 bits (100), Expect = 0.004
 Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGHVDGQKAGDDKQAHHGATARSQRASGR---------HPQA 358
            S+R + +  G    AV   GH   + +    Q  H   + SQ  S +         H ++
Sbjct: 820  SSRHSGIGRGQASSAVRDRGHRGSRGSQASDQEGHSEDSDSQSVSAQRQAGSHQQSHQES 879

Query: 357  VRSGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAGDD 178
             R   +G+ G       Q+   +         + ++G R G+H E +R + +        
Sbjct: 880  TRGRSQGRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQ 939

Query: 177  ETQRPHARSGRGGR 136
            +T R H  S RGGR
Sbjct: 940  DTIRAHPGSRRGGR 953

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 36/134 (26%), Positives = 57/134 (41%), Gaps = 9/134 (6%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR---HPQAVRSG 346
            S+R A +  G    AV   GH    G +A D +     +  +S  A G+   H QA +  
Sbjct: 1499 SSRHAGIGHGQASSAVRDSGHRGYRGSQATDSEGHSEDSDTQSVSAQGQAGPHQQAHQES 1558

Query: 345  DEGQGGDEPVVAVQLLARKNRGETIDAGQGAS----GLRYGTHSESSRSAPKSDYGAGDD 178
              GQ G+    +   L + +  E  ++  G S    G R G+H + ++ + +        
Sbjct: 1559 ARGQSGESSGRSGSFLYQVSTHEQSESTHGQSVPSTGGRQGSHHDQAQDSSRHSASQEGQ 1618

Query: 177  ETQRPHARSGRGGR 136
            +T R H  S RGGR
Sbjct: 1619 DTIRGHPGSSRGGR 1632

 Score = 40.8 bits (94), Expect = 0.018
 Identities = 37/139 (26%), Positives = 50/139 (35%), Gaps = 19/139 (13%)
 Frame = -3

Query: 453  GHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRGET 274
            GH    ++ D    HH   +   +A+  H QA  S  E  G        Q  A  +R   
Sbjct: 1774 GHRHSAESSDQSGTHHAENSSGGQAASSHEQARSSAGERHGSHH-----QQSADSSRHSG 1828

Query: 273  IDAGQGASGLRYGTHSESSRSAPKSDYGAGDDET-------------QRPHARSGRG--- 142
            I  GQ +S +R   H  SS S      G  +D               Q+ H  S RG   
Sbjct: 1829 IGHGQASSAVRDSGHRGSSGSQASDSEGHSEDSDTQSVSAHGQAGSHQQSHQESTRGRSQ 1888

Query: 141  ---GRPCFFIEKLKVMEQS 94
               GR   F+ ++   EQS
Sbjct: 1889 EGSGRSGSFLYQVSTHEQS 1907

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 33/136 (24%), Positives = 52/136 (37%), Gaps = 11/136 (8%)
 Frame = -3

Query: 510 SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR---------HP 364
           S+R + +  G    AV   GH    G +A D  Q  H   + SQ  SG+         H 
Sbjct: 496 SSRHSGIGHGQASSAVRDSGHRGYSGSQASD--QEGHSENSDSQSVSGQRQARSHQQSHQ 553

Query: 363 QAVRSGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAG 184
           ++ R    G+ G       Q+   +           ++  R G+H + +R + +      
Sbjct: 554 ESTRGQSRGRSGRSGSFLYQVSTHEQSESAHGRSAPSTRRRQGSHHDQARDSSRHSASQE 613

Query: 183 DDETQRPHARSGRGGR 136
             +T R H  S RGGR
Sbjct: 614 GQDTIRGHPGSSRGGR 629

 Score = 35.0 bits (79), Expect = 1.0
 Identities = 29/134 (21%), Positives = 50/134 (36%), Gaps = 9/134 (6%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR-------HPQA 358
            S+R + +  G    AV   GH    G +A D +     +  +S  A G+       H ++
Sbjct: 1000 SSRHSGIGHGQASSAVRDSGHRGSSGSQASDSEGHSEDSDTQSVSAQGQAGPHQQSHQES 1059

Query: 357  VRSGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAGDD 178
             R    G+ G       Q+   +         + ++  R G+H E +R + +        
Sbjct: 1060 TRGRSAGRSGRSGSFLYQVSTHEQSESAHGRARTSTRGRQGSHHEQARDSSRHSTSQEGQ 1119

Query: 177  ETQRPHARSGRGGR 136
            +T R H     GGR
Sbjct: 1120 DTIRGHPGPSSGGR 1133

 Score = 34.3 bits (77), Expect = 1.7
 Identities = 47/164 (28%), Positives = 63/164 (37%), Gaps = 35/164 (21%)
 Frame = -3

Query: 480  HVHDAVEGLGHVDGQKAGDDKQAHHGATARSQRASGRHPQAV-RSGDEG--------QGG 328
            H   A +   H   Q+  D  +AH G+  R  R    H Q+V RSG  G        QG 
Sbjct: 922  HHEQARDSSRHSASQEGQDTIRAHPGSR-RGGRQGSHHEQSVDRSGHSGSHHSHTTSQGR 980

Query: 327  DEPVVAV-------QLLARKNRGETIDAGQGASGLRYGTHSESSRS-APKSDYGAGDDET 172
             +            Q  A  +R   I  GQ +S +R   H  SS S A  S+  + D +T
Sbjct: 981  SDASHGQSGSGSHHQQSADSSRHSGIGHGQASSAVRDSGHRGSSGSQASDSEGHSEDSDT 1040

Query: 171  QR--------PHARS----------GRGGRPCFFIEKLKVMEQS 94
            Q         PH +S          GR GR   F+ ++   EQS
Sbjct: 1041 QSVSAQGQAGPHQQSHQESTRGRSAGRSGRSGSFLYQVSTHEQS 1084

 Score = 33.9 bits (76), Expect = 2.2
 Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 11/116 (9%)
 Frame = -3

Query: 453 GHVDGQK--AGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRG 280
           GH +  +  +G   + HHG+     R   RHP   RS DE +            +     
Sbjct: 83  GHSEDSERHSGSASRNHHGSAWEQSRDGSRHP---RSHDEDRASHGHSADSSRQSGTRHA 139

Query: 279 ETIDAGQGAS---------GLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGG 139
           ET   GQ AS         G R+G+H + S  + +   G G  +     + SG  G
Sbjct: 140 ETSSRGQTASSHEQARSSAGERHGSHHQQSADSSRHS-GIGHGQASTAVSDSGHRG 194

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 33/139 (23%), Positives = 47/139 (33%), Gaps = 19/139 (13%)
 Frame = -3

Query: 453 GHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRGET 274
           GH    ++      HH   +   +A+    QA  S  E  G        Q  A  +R   
Sbjct: 447 GHRQSAESSSQSGTHHAENSSGGQAASSQEQARSSAGERHGSGH-----QQSADSSRHSG 501

Query: 273 IDAGQGASGLRYGTHSESSRSAPKSDYGAGDDETQ---------RPHARS---------- 151
           I  GQ +S +R   H   S S      G  ++            R H +S          
Sbjct: 502 IGHGQASSAVRDSGHRGYSGSQASDQEGHSENSDSQSVSGQRQARSHQQSHQESTRGQSR 561

Query: 150 GRGGRPCFFIEKLKVMEQS 94
           GR GR   F+ ++   EQS
Sbjct: 562 GRSGRSGSFLYQVSTHEQS 580

 Score = 32.0 bits (71), Expect = 8.5
 Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 11/133 (8%)
 Frame = -3

Query: 432 AGDDKQAHHGATARSQRASG-RHPQAVR----SGDEGQGGDEPVVAVQLLARKNRGETID 268
           AG+   +HH  +A S R SG  H QA      SG  G  G +        A  N G + D
Sbjct: 158 AGERHGSHHQQSADSSRHSGIGHGQASTAVSDSGHRGYRGSQ--------ASDNEGHSED 209

Query: 267 ------AGQGASGLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGGRPCFFIEKLKV 106
                 AGQ  +  R+ +H ES+R               R    SGR G   + +   + 
Sbjct: 210 SDSQSVAGQRQARSRHQSHQESTRG--------------RSRGGSGRSGSFLYQVSTHEQ 255

Query: 105 MEQSHDILTGFTG 67
            E SH      TG
Sbjct: 256 SESSHGWARTSTG 268

 Score = 32.0 bits (71), Expect = 8.5
 Identities = 34/118 (28%), Positives = 48/118 (39%), Gaps = 2/118 (1%)
 Frame = -3

Query: 483  GHVHDAVEGLGHVDGQKAGDDKQAHHGAT-ARSQRASGRHPQAVRSGDEGQGGDEPVVAV 307
            GH  D+        GQ AG  +Q+H  +T  RSQ  SG      RSG            +
Sbjct: 1856 GHSEDSDTQSVSAHGQ-AGSHQQSHQESTRGRSQEGSG------RSGS----------FL 1898

Query: 306  QLLARKNRGETIDAGQGAS-GLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGGR 136
              ++   + E+     G S G R G+  E +R + +        +T R H  S RGGR
Sbjct: 1899 YQVSTHEQSESAHGRAGPSTGGRQGSRHEQARDSSRHSASQEGQDTIRGHPGSRRGGR 1956

>ref|XP_048104.2| similar to profilaggrin - human (fragments) [Homo sapiens]
          Length = 5689

 Score = 41.6 bits (96), Expect = 0.011
 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 2/131 (1%)
 Frame = -3

Query: 522  VRERSARSAVLKLGHVHDAVEGLGHVDGQKAGDDKQA--HHGATARSQRASGRHPQAVRS 349
            +  R A SAV   GH   +       +G     D Q+   HG     Q++   H ++ R 
Sbjct: 2677 IPRRQASSAVRDSGHWGSSGSQASDSEGHSEESDTQSVSGHGQDGPHQQS---HQESARD 2733

Query: 348  GDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAGDDETQ 169
               G+ G       Q+   +         + ++G R G+H E +R + +        +T 
Sbjct: 2734 WSGGRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTI 2793

Query: 168  RPHARSGRGGR 136
            R H  S RGGR
Sbjct: 2794 RAHPGSRRGGR 2804

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR---HPQAVRSG 346
            S+R + +  G    AV   GH    G +A D +     +  +S  A G+   H Q+ +  
Sbjct: 3644 SSRHSGIGHGQASSAVRDSGHRGYSGSQASDSEGHSEDSDTQSVSAQGKAGPHQQSHKES 3703

Query: 345  DEGQGGDEPVVAVQLLARKNRGETIDAGQGAS----GLRYGTHSESSRSAPKSDYGAGDD 178
              GQ G+    +   L + +  E  ++  G S    G R G+H + ++ + +        
Sbjct: 3704 ARGQSGESSGRSGSFLYQVSTHEQSESTHGQSAPSTGGRQGSHYDQAQDSSRHSASQEGQ 3763

Query: 177  ETQRPHARSGRGGR 136
            +T R H    RGGR
Sbjct: 3764 DTIRGHPGPSRGGR 3777

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 33/134 (24%), Positives = 54/134 (39%), Gaps = 9/134 (6%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR---HPQAVRSG 346
            S+R +    G    AV   GH    G +A D +     +  +S    G+     Q+ +  
Sbjct: 2103 SSRHSATGRGQASSAVSDRGHRGSSGSQASDSEGHSENSDTQSVSGHGKAGLRQQSHQES 2162

Query: 345  DEGQGGDEPVVAVQLLARKNRGETIDAGQGASGL----RYGTHSESSRSAPKSDYGAGDD 178
              G+ G+    +   L + +  E  D+  G +G     R G+H E +R + +        
Sbjct: 2163 TRGRSGERSGRSGSSLYQVSTHEQPDSAHGRTGTSTGGRQGSHHEQARDSSRHSASQEGQ 2222

Query: 177  ETQRPHARSGRGGR 136
            +T R H  S RGGR
Sbjct: 2223 DTIRGHPGSSRGGR 2236

 Score = 40.0 bits (92), Expect = 0.031
 Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 19/139 (13%)
 Frame = -3

Query: 453  GHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRGET 274
            GH    ++      HH   +   +A+  H QA  S  E  G        Q  A  +R   
Sbjct: 5215 GHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSHH-----QQSADSSRHSG 5269

Query: 273  IDAGQGASGLRYGTHSESSRS-APKSDYGAGDDETQR--------PHARS---------- 151
            I  GQ +S +R   H  SS S A  S+  + D +TQ         PH +S          
Sbjct: 5270 IGHGQASSAVRDSGHRGSSGSQASDSEGHSEDSDTQSVSAHGQAGPHQQSHQESTRGRSA 5329

Query: 150  GRGGRPCFFIEKLKVMEQS 94
            GR GR   F+ ++   EQS
Sbjct: 5330 GRSGRSGSFLYQVSTHEQS 5348

 Score = 38.9 bits (89), Expect = 0.069
 Identities = 30/109 (27%), Positives = 44/109 (39%), Gaps = 2/109 (1%)
 Frame = -3

Query: 462  EGLGHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNR 283
            EG      + +G   + HHG+     R   RHP   RS DE +            +    
Sbjct: 2013 EGHSEDSERHSGSASRNHHGSAWEQSRDGSRHP---RSHDEDRASHGHSADSSRQSGTRH 2069

Query: 282  GETIDAGQGASGLRYGTHSESSRSAPKSDYGAGDDET--QRPHARSGRG 142
             ET   GQ AS        E +RS+P   +G+G  ++     H+ +GRG
Sbjct: 2070 AETSSRGQTASS------HEQARSSPGERHGSGHQQSADSSRHSATGRG 2112

 Score = 35.4 bits (80), Expect = 0.77
 Identities = 29/117 (24%), Positives = 43/117 (35%), Gaps = 9/117 (7%)
 Frame = -3

Query: 462  EGLGHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNR 283
            EG      +++G   + HHG+     R   RHP   RS  E + G          +  + 
Sbjct: 3878 EGHSEDSERRSGSASRNHHGSAQEQSRDGSRHP---RSHHEDRAGHGHSAESSRQSGTHH 3934

Query: 282  GETIDAGQGAS---------GLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGG 139
             E    GQ AS         G R+G+H + S  + +   G G  +       SG  G
Sbjct: 3935 AENSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHS-GIGHGQASSAVRDSGHRG 3990

 Score = 35.0 bits (79), Expect = 1.0
 Identities = 31/142 (21%), Positives = 53/142 (36%), Gaps = 9/142 (6%)
 Frame = -3

Query: 510  SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR-------HPQA 358
            S+R + +  G    AV   GH    G +A D +     +  +S  A G+       H ++
Sbjct: 3968 SSRHSGIGHGQASSAVRDSGHRGSSGSQASDSEGHSEDSDTQSVSAHGQAGPHQQSHQES 4027

Query: 357  VRSGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGLRYGTHSESSRSAPKSDYGAGDD 178
             R    G+ G       Q+   +           ++G R G+H + +R + +        
Sbjct: 4028 TRGRSAGRSGRSGSFLYQVSTHEQSESAHGRTGTSTGGRQGSHHKQARDSSRHSTSQEGQ 4087

Query: 177  ETQRPHARSGRGGRPCFFIEKL 112
            +T   H  S  GGR     E+L
Sbjct: 4088 DTIHGHPGSSSGGRQGSHYEQL 4109

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 11/116 (9%)
 Frame = -3

Query: 453  GHVDGQK--AGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRG 280
            GH +  +  +G   + HHG+     R   RHP   RS  E + G          +     
Sbjct: 4203 GHSEDSERWSGSASRNHHGSAQEQLRDGSRHP---RSHQEDRAGHGHSADSSRQSGTRHT 4259

Query: 279  ETIDAGQGAS---------GLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGG 139
            +T   GQ AS         G R+G+H + S  + +   G G  +       SG  G
Sbjct: 4260 QTSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHS-GIGHGQASSAVRDSGHRG 4314

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 11/116 (9%)
 Frame = -3

Query: 453  GHVDGQK--AGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNRG 280
            GH +  +  +G   + HHG+     R   RHP   RS  E + G          +     
Sbjct: 4527 GHSEDSERWSGSASRNHHGSAQEQLRDGSRHP---RSHQEDRAGHGHSADSSRQSGTRHT 4583

Query: 279  ETIDAGQGAS---------GLRYGTHSESSRSAPKSDYGAGDDETQRPHARSGRGG 139
            +T   GQ AS         G R+G+H + S  + +   G G  +       SG  G
Sbjct: 4584 QTSSGGQAASSHEQARSSAGERHGSHHQQSADSSRHS-GIGHGQASSAVRDSGHRG 4638

>gb|AAA63246.1| profilaggrin
          Length = 465

 Score = 41.2 bits (95), Expect = 0.014
 Identities = 35/136 (25%), Positives = 55/136 (39%), Gaps = 11/136 (8%)
 Frame = -3

Query: 510 SARSAVLKLGHVHDAVEGLGH--VDGQKAGDDKQAHHGATARSQRASGR-----HPQAVR 352
           S+R +    G    AV   GH    G +A D +   H   + +Q  SG        Q+ +
Sbjct: 172 SSRHSATGRGQASSAVSDRGHRGSSGSQASDSEG--HSENSDTQSVSGHGQARLRQQSHQ 229

Query: 351 SGDEGQGGDEPVVAVQLLARKNRGETIDAGQGASGL----RYGTHSESSRSAPKSDYGAG 184
               G+ G+    +   L + +  E  D+  G +G     R G+H E +R + +      
Sbjct: 230 ESARGRSGERSGRSGSFLYQVSTHEQSDSAHGRTGTSTGGRQGSHHEQARDSSRHSASQE 289

Query: 183 DDETQRPHARSGRGGR 136
             +T R H  S RGGR
Sbjct: 290 GQDTIRGHPGSSRGGR 305

 Score = 38.1 bits (87), Expect = 0.12
 Identities = 30/109 (27%), Positives = 44/109 (39%), Gaps = 2/109 (1%)
 Frame = -3

Query: 462 EGLGHVDGQKAGDDKQAHHGATARSQRASGRHPQAVRSGDEGQGGDEPVVAVQLLARKNR 283
           EG      + +G   + HHG+     R   RHP   RS DE +            +    
Sbjct: 82  EGHSEDSERHSGSASRNHHGSAWEQSRDVSRHP---RSHDEDRASHGHSADSSRQSGTRH 138

Query: 282 GETIDAGQGASGLRYGTHSESSRSAPKSDYGAGDDET--QRPHARSGRG 142
            ET   GQ AS        E +RS+P   +G+G  ++     H+ +GRG
Sbjct: 139 AETSSRGQTASS------HEQARSSPGERHGSGHQQSADSSRHSATGRG 181



EST assemble image


clone accession position
1 MX230b02_r BP090855 1 359
2 MXL036g09_r BP095155 13 525
3 MX059f12_r BP088409 27 491
4 CM069g11_r AV391180 90 708
5 MX055c02_r BP088245 91 454
6 MX055a05_r BP088236 91 460
7 MX204e01_r BP089290 92 373
8 LC080e03_r AV624634 92 563
9 LC054c07_r AV622770 92 652
10 MX208b05_r BP089480 93 466
11 LC035d10_r AV621394 94 616
12 LC073g11_r AV624165 94 632
13 LC036e04_r AV621464 94 618
14 LC056e08_r AV622919 95 644
15 LCL088e01_r AV631079 96 603
16 LC088b10_r AV625123 98 619
17 MX020a06_r BP086911 104 467
18 MX253f07_r BP092398 105 632
19 LCL040f04_r AV628364 106 442
20 CM078g06_r AV391811 107 699
21 MX246b04_r BP091909 109 428
22 MX037e07_r BP087562 109 605
23 HC075b06_r AV637592 109 629
24 MX015g01_r BP086739 109 632
25 CM039a06_r AV388939 109 688
26 HC028g03_r AV634062 109 644
27 MX041a07_r BP087670 109 522
28 CM029b04_r AV389343 109 700
29 MX015a09_r BP086714 109 521
30 CM030g04_r AV397414 109 750
31 MX256b07_r BP092573 109 504
32 MXL014c10_r BP093821 109 578
33 MX003g02_r BP086192 109 495
34 MX251f05_r BP092251 110 656
35 MX050f06_r BP088064 111 465
36 CM080d10_r AV392059 112 720
37 CM071b10_r AV391366 114 746
38 MX059e02_r BP088400 117 474
39 CM024d12_r AV388278 117 738
40 HC038d02_r AV634817 119 475
41 HC019g08_r AV633349 119 630
42 CM098e05_r AV392902 119 536
43 HC093g11_r AV639013 120 550
44 HC095b03_r AV639110 121 596
45 CM100d07_r AV392818 124 667
46 HC094b05_r AV639032 127 670
47 HC017f01_r AV633170 131 652
48 LC014g10_r AV619907 139 659
49 CM096g09_r AV392770 204 634
50 LC092f06_r AV625441 238 632
51 LC064e01_r AV623484 305 785




Chlamydomonas reinhardtii
Kazusa DNA Research Institute