Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001176A_C01 KCC001176A_c01
(1101 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_601191.1| translation initiation factor 2 [Corynebacteriu... 55 3e-06
gb|AAA59163.1| mucin 52 2e-05
pir||A43932 mucin 2 precursor, intestinal - human (fragments) 52 2e-05
gb|AAA59875.1| mucin 52 2e-05
gb|AAH51947.1| Similar to serine/arginine repetitive matrix 2 [M... 52 2e-05
>ref|NP_601191.1| translation initiation factor 2 [Corynebacterium glutamicum ATCC
13032] gi|21324755|dbj|BAB99378.1| Translation
initiation factor 2 (GTPase) [Corynebacterium glutamicum
ATCC 13032]
Length = 1004
Score = 54.7 bits (130), Expect = 3e-06
Identities = 56/187 (29%), Positives = 72/187 (37%), Gaps = 5/187 (2%)
Frame = -2
Query: 551 PHKAAAAPAPAAPAAAAPAPAAAAPAPAAPAAVLFRRGQLRRAAGRTSRTCRPARSPSPD 372
P AA PAPAAP+AA+ A AAP P A AA + +PA +P
Sbjct: 89 PAAPAAKPAPAAPSAASAAKPGAAPKPGVQAK--------PAAAAKPGAPAKPAAPAAPS 140
Query: 371 PRRRGGR*TRASSCK*VRHPPPGCSWPCAGCAGPRTRRSWPPPGSCGSVDRFGGNARGKR 192
+ G A++ K P S P G A +++ P R GG R
Sbjct: 141 AAKSGSAPKPAAAAK------PAFSGPTPGDA---AKKAEPAAKPGAEAPRPGGMPRPMG 191
Query: 191 KGCKYQPNPN*SRPSEA-----TGGGQGKRAAIEGDSEAGNRGASARAGGWQWQGRARQG 27
K P P P A TGGG+ G G G GG + QG+ R G
Sbjct: 192 KPA---PKPGARAPRVANNPFSTGGGERPAPRPGGGPRPG--GGPRPGGGPRPQGQGRPG 246
Query: 26 GEWKGRR 6
G+ G+R
Sbjct: 247 GQRDGQR 253
Score = 45.8 bits (107), Expect = 0.001
Identities = 63/214 (29%), Positives = 77/214 (35%), Gaps = 21/214 (9%)
Frame = -2
Query: 581 VRTSTA*HTTPHKAAAAPAPAAPAAA----APAPAAAA-PAPAAPAAVLFRRGQLRRAAG 417
V+ A P A APAAP+AA AP PAAAA PA + P G
Sbjct: 117 VQAKPAAAAKPGAPAKPAAPAAPSAAKSGSAPKPAAAAKPAFSGP------------TPG 164
Query: 416 RTSRTCRPARSPSPDPRRRGGR*TRASSCK*VRHPPPGCSWPCAGCAGPRT--------- 264
++ PA P + R GG P G P G PR
Sbjct: 165 DAAKKAEPAAKPGAEAPRPGG-----------MPRPMGKPAPKPGARAPRVANNPFSTGG 213
Query: 263 -RRSWPPPGS---CGSVDRFGGNARGKRKGCKYQPNPN*SRPSEATG--GGQGKRAAIEG 102
R P PG G R GG R + +G P R + G GQG R G
Sbjct: 214 GERPAPRPGGGPRPGGGPRPGGGPRPQGQG-----RPGGQRDGQRDGQRDGQGNRG---G 265
Query: 101 DSEAGNRGASARAGGWQWQGRAR-QGGEWKGRRG 3
+ G GG + QG +R QGG +G +G
Sbjct: 266 QRQGAGAGGPRPQGGPRPQGGSRPQGGSAQGAQG 299
Score = 38.9 bits (89), Expect = 0.16
Identities = 58/203 (28%), Positives = 69/203 (33%), Gaps = 27/203 (13%)
Frame = -2
Query: 554 TPHKAAAAPAPAA-PAAAAPAPAAA-------APAPAAPAAVL----FRRGQLRRAAGRT 411
TP AA PAA P A AP P AP P A A + F G R A R
Sbjct: 162 TPGDAAKKAEPAAKPGAEAPRPGGMPRPMGKPAPKPGARAPRVANNPFSTGGGERPAPRP 221
Query: 410 SRTCRPARSPSPD--PR-----RRGGR*TRASSCK*VRHPPPGCSWPCAGCAGPRTRRSW 252
RP P P PR R GG+ + G AG GPR +
Sbjct: 222 GGGPRPGGGPRPGGGPRPQGQGRPGGQRDGQRDGQRDGQGNRGGQRQGAGAGGPRPQGGP 281
Query: 251 PPPGSC----GSVDRFGGNARGKRKGCKYQPNPN*SRPS----EATGGGQGKRAAIEGDS 96
P G GS G +R+G +P+P P+ A G+G R G
Sbjct: 282 RPQGGSRPQGGSAQGAQGAPSQERQGGGRRPSPAMMPPTPGQMPAKAPGKGGRGGQAGGG 341
Query: 95 EAGNRGASARAGGWQWQGRARQG 27
G GG +G R G
Sbjct: 342 AGGGFNRGGGTGGGAGRGGRRGG 364
>gb|AAA59163.1| mucin
Length = 1270
Score = 51.6 bits (122), Expect = 2e-05
Identities = 45/155 (29%), Positives = 61/155 (39%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
PSP P T P PSP T P P +T + P+P P + T
Sbjct: 937 PSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTP-PPTTTPSP-----PTTTTTTPPPT 990
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATP 365
T P PP +P + S T+ P P T T P T+ TT +PS P T
Sbjct: 991 TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP---TTTTPSPPITTT 1047
Query: 366 TWVRRRTSSRPTCSRSPTRSATELTTPEENSSGSS 470
T T+ + +P+ T +TTP ++ SS
Sbjct: 1048 TTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSS 1082
Score = 44.7 bits (104), Expect = 0.003
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 6/162 (3%)
Frame = +3
Query: 3 PPSPLPLA------TLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASV 164
PP+ P+ TLP T P P P T PP P T P+P T P+
Sbjct: 916 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP-PTTT----------PSPPTTTTPSPP 964
Query: 165 WVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSP 344
+ TT PP +P + PT++ P T P TS + T +P
Sbjct: 965 TI----TTTTPPPTTTPSPPTTTT-TTPPPTTTPSPPTTTPITPPTSTTTLP---PTTTP 1016
Query: 345 SLPAATPTWVRRRTSSRPTCSRSPTRSATELTTPEENSSGSS 470
S P T T T+ P + +P+ T TTP ++ SS
Sbjct: 1017 SPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSS 1058
Score = 43.1 bits (100), Expect = 0.009
Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 8/160 (5%)
Frame = +3
Query: 6 PSPLPLATLPRTPLP--------LPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPAS 161
P P TLP T P P P T PP+ T L S P T P
Sbjct: 783 PPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPP- 841
Query: 162 VWVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGS 341
TT P PP +P S + + T++ P P T + P T+ S TT
Sbjct: 842 -------TTTPSPPTTTP-SPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLP 893
Query: 342 PSLPAATPTWVRRRTSSRPTCSRSPTRSATELTTPEENSS 461
P+ + PT T+ PT + SP + T +T P ++
Sbjct: 894 PTTTPSPPT--TTTTTPPPTTTPSPP-TTTPITPPTSTTT 930
Score = 41.6 bits (96), Expect = 0.025
Identities = 42/155 (27%), Positives = 57/155 (36%), Gaps = 1/155 (0%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPS-PCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVF 182
PSP P T P PS P T P P T + + P P P +
Sbjct: 781 PSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPP------IS 834
Query: 183 TTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAAT 362
TT PP +P P ++ P P T P T+ T T +PS P T
Sbjct: 835 TTTTPPPTTTPS-----------PPTTTPSPPTTTPSPPTT--TTTTPPPTTTPSPPMTT 881
Query: 363 PTWVRRRTSSRPTCSRSPTRSATELTTPEENSSGS 467
P T++ P + +P+ T TTP ++ S
Sbjct: 882 PITPPASTTTLPP-TTTPSPPTTTTTTPPPTTTPS 915
Score = 40.8 bits (94), Expect = 0.042
Identities = 43/151 (28%), Positives = 55/151 (35%), Gaps = 1/151 (0%)
Frame = +3
Query: 18 PLATLPRTPLPLPSP-CTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFTTFP 194
P T P P PSP T PP T S P T PAS L TT P
Sbjct: 840 PPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTT-LPPTTTP 898
Query: 195 FPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATPTWV 374
PP + + PT++ P T P TS + T +PS P T T
Sbjct: 899 SPPTTTTTTPP--------PTTTPSPPTTTPITPPTSTTTLP---PTTTPSPPPTTTTTP 947
Query: 375 RRRTSSRPTCSRSPTRSATELTTPEENSSGS 467
T+ P + +P+ TTP ++ S
Sbjct: 948 PPTTTPSPPTTTTPSPPTITTTTPPPTTTPS 978
Score = 38.5 bits (88), Expect = 0.21
Identities = 40/146 (27%), Positives = 54/146 (36%), Gaps = 8/146 (5%)
Frame = +3
Query: 3 PPSPLPLA------TLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASV 164
PP+ P+ TLP T P P P T PP S P T P +
Sbjct: 995 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTT 1054
Query: 165 WVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPR--TSWRRMTYSFTTG 338
TT P PP + + + PT++ P T T P T+ + TT
Sbjct: 1055 TPSSPITTTPSPPTTTMTTPS--------PTTTPSSPITTTTTPSSTTTPSPPPTTMTTP 1106
Query: 339 SPSLPAATPTWVRRRTSSRPTCSRSP 416
SP+ + PT T+ PT + SP
Sbjct: 1107 SPTTTPSPPTTTM--TTLPPTTTSSP 1130
Score = 38.5 bits (88), Expect = 0.21
Identities = 40/160 (25%), Positives = 58/160 (36%), Gaps = 7/160 (4%)
Frame = +3
Query: 3 PPSPLPLATLPRTPLPLPSPCTRAGPPV------PRLTVALDCRALSLPAPRRFTWPASV 164
P P + P T P P T PP+ P T L P T P
Sbjct: 852 PSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPT 911
Query: 165 WVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSP 344
TT P P S ++ + PT++ P T P T+ + TT +P
Sbjct: 912 TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTP 971
Query: 345 SLPAATPTWVRRRTSSRP-TCSRSPTRSATELTTPEENSS 461
P TP+ T++ P T + SP + T +T P ++
Sbjct: 972 P-PTTTPSPPTTTTTTPPPTTTPSPP-TTTPITPPTSTTT 1009
Score = 34.7 bits (78), Expect = 3.0
Identities = 25/87 (28%), Positives = 33/87 (37%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
PSP + P T PS T PP +T S P T P + T
Sbjct: 1074 PSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTT-TSSPLT 1132
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSC 266
T P PP ++P + S + PT+ C
Sbjct: 1133 TTPLPPSITPPTF--SPFSTTTPTTPC 1157
>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
Length = 3020
Score = 51.6 bits (122), Expect = 2e-05
Identities = 45/155 (29%), Positives = 61/155 (39%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
PSP P T P PSP T P P +T + P+P P + T
Sbjct: 1562 PSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTP-PPTTTPSP-----PTTTTTTPPPT 1615
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATP 365
T P PP +P + S T+ P P T T P T+ TT +PS P T
Sbjct: 1616 TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP---TTTTPSPPITTT 1672
Query: 366 TWVRRRTSSRPTCSRSPTRSATELTTPEENSSGSS 470
T T+ + +P+ T +TTP ++ SS
Sbjct: 1673 TTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSS 1707
Score = 44.7 bits (104), Expect = 0.003
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 6/162 (3%)
Frame = +3
Query: 3 PPSPLPLA------TLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASV 164
PP+ P+ TLP T P P P T PP P T P+P T P+
Sbjct: 1541 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP-PTTT----------PSPPTTTTPSPP 1589
Query: 165 WVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSP 344
+ TT PP +P + PT++ P T P TS + T +P
Sbjct: 1590 TI----TTTTPPPTTTPSPPTTTT-TTPPPTTTPSPPTTTPITPPTSTTTLP---PTTTP 1641
Query: 345 SLPAATPTWVRRRTSSRPTCSRSPTRSATELTTPEENSSGSS 470
S P T T T+ P + +P+ T TTP ++ SS
Sbjct: 1642 SPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSS 1683
Score = 43.1 bits (100), Expect = 0.009
Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 8/160 (5%)
Frame = +3
Query: 6 PSPLPLATLPRTPLP--------LPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPAS 161
P P TLP T P P P T PP+ T L S P T P
Sbjct: 1408 PPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPP- 1466
Query: 162 VWVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGS 341
TT P PP +P S + + T++ P P T + P T+ S TT
Sbjct: 1467 -------TTTPSPPTTTP-SPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLP 1518
Query: 342 PSLPAATPTWVRRRTSSRPTCSRSPTRSATELTTPEENSS 461
P+ + PT T+ PT + SP + T +T P ++
Sbjct: 1519 PTTTPSPPT--TTTTTPPPTTTPSPP-TTTPITPPTSTTT 1555
Score = 41.6 bits (96), Expect = 0.025
Identities = 42/155 (27%), Positives = 57/155 (36%), Gaps = 1/155 (0%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPS-PCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVF 182
PSP P T P PS P T P P T + + P P P +
Sbjct: 1406 PSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPP------IS 1459
Query: 183 TTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAAT 362
TT PP +P P ++ P P T P T+ T T +PS P T
Sbjct: 1460 TTTTPPPTTTPS-----------PPTTTPSPPTTTPSPPTT--TTTTPPPTTTPSPPMTT 1506
Query: 363 PTWVRRRTSSRPTCSRSPTRSATELTTPEENSSGS 467
P T++ P + +P+ T TTP ++ S
Sbjct: 1507 PITPPASTTTLPP-TTTPSPPTTTTTTPPPTTTPS 1540
Score = 40.8 bits (94), Expect = 0.042
Identities = 43/151 (28%), Positives = 55/151 (35%), Gaps = 1/151 (0%)
Frame = +3
Query: 18 PLATLPRTPLPLPSP-CTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFTTFP 194
P T P P PSP T PP T S P T PAS L TT P
Sbjct: 1465 PPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTT-LPPTTTP 1523
Query: 195 FPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATPTWV 374
PP + + PT++ P T P TS + T +PS P T T
Sbjct: 1524 SPPTTTTTTPP--------PTTTPSPPTTTPITPPTSTTTLP---PTTTPSPPPTTTTTP 1572
Query: 375 RRRTSSRPTCSRSPTRSATELTTPEENSSGS 467
T+ P + +P+ TTP ++ S
Sbjct: 1573 PPTTTPSPPTTTTPSPPTITTTTPPPTTTPS 1603
Score = 38.5 bits (88), Expect = 0.21
Identities = 40/146 (27%), Positives = 54/146 (36%), Gaps = 8/146 (5%)
Frame = +3
Query: 3 PPSPLPLA------TLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASV 164
PP+ P+ TLP T P P P T PP S P T P +
Sbjct: 1620 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTT 1679
Query: 165 WVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPR--TSWRRMTYSFTTG 338
TT P PP + + + PT++ P T T P T+ + TT
Sbjct: 1680 TPSSPITTTPSPPTTTMTTPS--------PTTTPSSPITTTTTPSSTTTPSPPPTTMTTP 1731
Query: 339 SPSLPAATPTWVRRRTSSRPTCSRSP 416
SP+ + PT T+ PT + SP
Sbjct: 1732 SPTTTPSPPTTTM--TTLPPTTTSSP 1755
Score = 38.5 bits (88), Expect = 0.21
Identities = 40/160 (25%), Positives = 58/160 (36%), Gaps = 7/160 (4%)
Frame = +3
Query: 3 PPSPLPLATLPRTPLPLPSPCTRAGPPV------PRLTVALDCRALSLPAPRRFTWPASV 164
P P + P T P P T PP+ P T L P T P
Sbjct: 1477 PSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPT 1536
Query: 165 WVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSP 344
TT P P S ++ + PT++ P T P T+ + TT +P
Sbjct: 1537 TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTP 1596
Query: 345 SLPAATPTWVRRRTSSRP-TCSRSPTRSATELTTPEENSS 461
P TP+ T++ P T + SP + T +T P ++
Sbjct: 1597 P-PTTTPSPPTTTTTTPPPTTTPSPP-TTTPITPPTSTTT 1634
Score = 34.7 bits (78), Expect = 3.0
Identities = 25/87 (28%), Positives = 33/87 (37%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
PSP + P T PS T PP +T S P T P + T
Sbjct: 1699 PSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTT-TSSPLT 1757
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSC 266
T P PP ++P + S + PT+ C
Sbjct: 1758 TTPLPPSITPPTF--SPFSTTTPTTPC 1782
Score = 33.1 bits (74), Expect = 8.8
Identities = 37/155 (23%), Positives = 55/155 (34%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
P+P P T T P+ + T P P T P +V + T
Sbjct: 1935 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQT----------------PTTVLITTTTT 1978
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATP 365
P P S KS + ++ P P T T+ T T + T +P+ P
Sbjct: 1979 MTPTPTPTSTKSTTVTPITTTTTVTATPTP--TGTQTPTMIPISTTTTVTPTPT-PTTGS 2035
Query: 366 TWVRRRTSSRPTCSRSPTRSATELTTPEENSSGSS 470
T TS+ P + + E +TP+ + S SS
Sbjct: 2036 TGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSS 2070
>gb|AAA59875.1| mucin
Length = 573
Score = 51.6 bits (122), Expect = 2e-05
Identities = 45/155 (29%), Positives = 61/155 (39%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
PSP P T P PSP T P P +T + P+P P + T
Sbjct: 220 PSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTP-PPTTTPSP-----PTTTTTTPPPT 273
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATP 365
T P PP +P + S T+ P P T T P T+ TT +PS P T
Sbjct: 274 TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP---TTTTPSPPITTT 330
Query: 366 TWVRRRTSSRPTCSRSPTRSATELTTPEENSSGSS 470
T T+ + +P+ T +TTP ++ SS
Sbjct: 331 TTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSS 365
Score = 44.7 bits (104), Expect = 0.003
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 6/162 (3%)
Frame = +3
Query: 3 PPSPLPLA------TLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASV 164
PP+ P+ TLP T P P P T PP P T P+P T P+
Sbjct: 199 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP-PTTT----------PSPPTTTTPSPP 247
Query: 165 WVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSP 344
+ TT PP +P + PT++ P T P TS + T +P
Sbjct: 248 TI----TTTTPPPTTTPSPPTTTT-TTPPPTTTPSPPTTTPITPPTSTTTLP---PTTTP 299
Query: 345 SLPAATPTWVRRRTSSRPTCSRSPTRSATELTTPEENSSGSS 470
S P T T T+ P + +P+ T TTP ++ SS
Sbjct: 300 SPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSS 341
Score = 43.5 bits (101), Expect = 0.007
Identities = 42/154 (27%), Positives = 57/154 (36%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
P P TLP T P P T PP P T + + P P P + T
Sbjct: 66 PPPTSTTTLPPTTTPSPPTTTTTTPP-PTTTPSPPITTTTTPPPTTTPSPP------IST 118
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATP 365
T PP +P P ++ P P T P T+ T T +PS P TP
Sbjct: 119 TTTPPPTTTPS-----------PPTTTPSPPTTTPSPPTT--TTTTPPPTTTPSPPTTTP 165
Query: 366 TWVRRRTSSRPTCSRSPTRSATELTTPEENSSGS 467
T++ P + +P+ T TTP ++ S
Sbjct: 166 ITPPASTTTLPP-TTTPSPPTTTTTTPPPTTTPS 198
Score = 41.2 bits (95), Expect = 0.032
Identities = 43/151 (28%), Positives = 55/151 (35%), Gaps = 1/151 (0%)
Frame = +3
Query: 18 PLATLPRTPLPLPSP-CTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFTTFP 194
P T P P PSP T PP T S P T PAS L TT P
Sbjct: 123 PPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTT-LPPTTTP 181
Query: 195 FPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATPTWV 374
PP + + PT++ P T P TS + T +PS P T T
Sbjct: 182 SPPTTTTTTPP--------PTTTPSPPTTTPITPPTSTTTLP---PTTTPSPPPTTTTTP 230
Query: 375 RRRTSSRPTCSRSPTRSATELTTPEENSSGS 467
T+ P + +P+ TTP ++ S
Sbjct: 231 PPTTTPSPPTTTTPSPPTITTTTPPPTTTPS 261
Score = 40.0 bits (92), Expect = 0.072
Identities = 38/155 (24%), Positives = 55/155 (34%)
Frame = +3
Query: 3 PPSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVF 182
P P + P T P P T PP + +LP + P +
Sbjct: 135 PSPPTTTPSPPTTTTTTPPPTTTPSPPT-TTPITPPASTTTLPPTTTPSPPTTTTTTPPP 193
Query: 183 TTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAAT 362
TT P PP +P + S T+ P P T T P T+ +PS P T
Sbjct: 194 TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT-----------TPSPPTTT 242
Query: 363 PTWVRRRTSSRPTCSRSPTRSATELTTPEENSSGS 467
T++ P + +P+ T TTP ++ S
Sbjct: 243 TPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPS 277
Score = 39.3 bits (90), Expect = 0.12
Identities = 40/153 (26%), Positives = 56/153 (36%), Gaps = 1/153 (0%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
PSP T P PSP T P T L P T P T
Sbjct: 142 PSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPT 201
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPRTSWRRMTYSFTTGSPSLPAATP 365
T P P S ++ + PT++ P T P T+ + TT +P P TP
Sbjct: 202 TTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPP-PTTTP 260
Query: 366 TWVRRRTSSRP-TCSRSPTRSATELTTPEENSS 461
+ T++ P T + SP + T +T P ++
Sbjct: 261 SPPTTTTTTPPPTTTPSPP-TTTPITPPTSTTT 292
Score = 38.5 bits (88), Expect = 0.21
Identities = 40/146 (27%), Positives = 54/146 (36%), Gaps = 8/146 (5%)
Frame = +3
Query: 3 PPSPLPLA------TLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASV 164
PP+ P+ TLP T P P P T PP S P T P +
Sbjct: 278 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTT 337
Query: 165 WVGLVFTTFPFPPCVSPKSINRSA*ARRWPTSSCPRPGATCTRPR--TSWRRMTYSFTTG 338
TT P PP + + + PT++ P T T P T+ + TT
Sbjct: 338 TPSSPITTTPSPPTTTMTTPS--------PTTTPSSPITTTTTPSSTTTPSPPPTTMTTP 389
Query: 339 SPSLPAATPTWVRRRTSSRPTCSRSP 416
SP+ + PT T+ PT + SP
Sbjct: 390 SPTTTPSPPTTTM--TTLPPTTTSSP 413
Score = 34.7 bits (78), Expect = 3.0
Identities = 25/87 (28%), Positives = 33/87 (37%)
Frame = +3
Query: 6 PSPLPLATLPRTPLPLPSPCTRAGPPVPRLTVALDCRALSLPAPRRFTWPASVWVGLVFT 185
PSP + P T PS T PP +T S P T P + T
Sbjct: 357 PSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTT-TSSPLT 415
Query: 186 TFPFPPCVSPKSINRSA*ARRWPTSSC 266
T P PP ++P + S + PT+ C
Sbjct: 416 TTPLPPSITPPTF--SPFSTTTPTTPC 440
>gb|AAH51947.1| Similar to serine/arginine repetitive matrix 2 [Mus musculus]
Length = 648
Score = 51.6 bits (122), Expect = 2e-05
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
Frame = -2
Query: 560 HTTPHKAAAAPAPAAPAAAAPAPAAAAPAPAAPAAVLFRRGQLRRAAGRTS------RTC 399
H+ P K ++ P AAAAP P A +P + +G+ RAAG T+ R
Sbjct: 332 HSPPDKPSS-PRACDKAAAAPTPPARGKDSQSPRSAPSSQGRGGRAAGGTARRRRRRRRR 390
Query: 398 RPARSPSPDPRRRGGR*TRASSCK*VRHPPPGCSWPCAGC-AGPRTRRSWPPPGSCGSVD 222
R +RS + PRRRG R T+ + PP G S +G + + P PG +
Sbjct: 391 RRSRSSANAPRRRGRRRTKPA-------PPRGSSRSLSGAHSSSDSGGGAPGPGPEPCSE 443
Query: 221 RFGGNARGKRKGCKYQPNPN*SRPSEA--TGGGQGKRAAIEGDSEAGNRGASARAGGW 54
R G GKR + P +RP+ + G +G+R EG+S +R G W
Sbjct: 444 R-GHGGHGKRA----KERPPRARPASTSPSPGTRGRRGGPEGNS--SSRSPGPHQGSW 494
