KCC001157A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001157A_C01 KCC001157A_c01
CCAAAATGGCCGCCATGATGCAGAAGAGCGCCTTCACCGGCAGCGCCGTGTCCTCCAAGT
CTGGCGTCCGCGCCAAGGCTGCCCGCGCCGTCGTCGACGTGCGCGCGGAGAAGAAGATCC
GCGTGGCCATCAACGGCTTCGGTCGCATTGGCCGCAACTTCCTGGCGCTGCTGGCACGGT
CGCCAGAACACCCTGGCTGGACGTGGTTGCCATCAACGACAGCGGCGGTGTCAAGCAGTG
CCAGCCACCTGCTGAAGTACGACTCCACCCTGGGCACGTTCGCCGCCGATGTTAAGATCG
TCGACGACAGCCACATCTCGGTGGACGGCAAGCAGATCAAGATTGTGTCCAGCCGCGACC
CCCTGGCAGCTGCCCCTGGAAGGAGATGAACATCGACCTGGTCATTGAGGGCACTGGTGT
CTTCATTGACAAGGTTGGCTGCTGTGCAAGCACATCCAGGCCGGTGCCTCCAAGGTGCTG
ATCACCGCCCCCGGCCAAGGGACAAGGACATCCCCACCTTCGTGGTCGGTGTGAACGAGG
GCGACTACAAGCACGAGTACCCCATCATCTCCAACGCCTCGTGCACCACCAACTGCCTGG
CCCCCTTCGTCAAGGGTGCTGGAGCAGAAGTTCGGCATCGTCAAGGGCACGATGACCACC
ACCCACTCCTACACCTGGTGACCAGCGCCTGCTGGACGCGTCCCACCGCGACCTGCGCCG
CGCCCGCGCCGCCGCCCTGAACATTGTGCCCACCACCACCGGTGCCGCCAAGGCCGTGTC
GCTGGTGCTGCCCAGCCTGAAGGGCAAGCTGAACGGCATTGCCCTGCGCGTGCCCACCCC
CACCGTGTCGGTCGTCGACCTGGTCGTCCAGGTTGAGAAGAAGACCTTCGCCGAGGAGGT
GAACGCCGCCTTCCGCGAGGCCGCCAACGGCCCCATGAAGGGCGTGCTGCACGTCGAGGA
CGCCCCCCTGGTGTCCATTGACTTCAAGTGCACCGACCAGTCGACCTCGATCGACGCCTC
CCTGACCATGGTCATGGGCGACGACATGGTCAAGGTCGTGGCCTGGTACGACAACGAGTG
GGGCTACTCCCAGCGCGTGGTCGACCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001157A_C01 KCC001157A_c01
         (1108 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_566796.2| glyceraldehyde 3-phosphate dehydrogenase A subu...   244  4e-95
pir||T09668 glyceraldehyde-3-phosphate dehydrogenase (NADP)  (ph...   248  3e-94
emb|CAC80392.1| glyceraldehyde-3-phosphate dehydrogenase [Spirog...   237  4e-92
sp|P50362|G3PA_CHLRE Glyceraldehyde 3-phosphate dehydrogenase A,...   320  3e-86
emb|CAC80388.1| glyceraldehyde-3-phosphate dehydrogenase [Marcha...   277  3e-73

>ref|NP_566796.2| glyceraldehyde 3-phosphate dehydrogenase A subunit (GapA)
            [Arabidopsis thaliana] gi|20455490|sp|P25856|G3PA_ARATH
            Glyceraldehyde 3-phosphate dehydrogenase A, chloroplast
            precursor (NADP-dependent glyceraldehydephosphate
            dehydrogenase subunit A) gi|11994300|dbj|BAB01730.1|
            glyceralehyde-3-phosphate dehydrogenase subunit
            [Arabidopsis thaliana]
            gi|16226559|gb|AAL16200.1|AF428431_1 AT3g26650/MLJ15_5
            [Arabidopsis thaliana] gi|16604418|gb|AAL24215.1|
            AT3g26650/MLJ15_5 [Arabidopsis thaliana]
            gi|16648728|gb|AAL25556.1| AT3g26650/MLJ15_5 [Arabidopsis
            thaliana] gi|19715651|gb|AAL91645.1| AT3g26650/MLJ15_5
            [Arabidopsis thaliana] gi|22655450|gb|AAM98317.1|
            At3g26650/MLJ15_5 [Arabidopsis thaliana]
          Length = 396

 Score =  244 bits (624), Expect(2) = 4e-95
 Identities = 122/144 (84%), Positives = 135/144 (93%)
 Frame = +2

Query: 677  GDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVV 856
            GDQRLLDASHRDLRRARAAALNIVPT+TGAAKAV+LVLP+LKGKLNGIALRVPTP VSVV
Sbjct: 244  GDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVV 303

Query: 857  DLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVM 1036
            DLVVQV KKTFAEEVNAAFR++A   +KG+L V D PLVS+DF+C+D ST+ID+SLTMVM
Sbjct: 304  DLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVM 363

Query: 1037 GDDMVKVVAWYDNEWGYSQRVVDL 1108
            GDDMVKV+AWYDNEWGYSQRVVDL
Sbjct: 364  GDDMVKVIAWYDNEWGYSQRVVDL 387

 Score =  127 bits (319), Expect(2) = 4e-95
 Identities = 87/198 (43%), Positives = 110/198 (54%), Gaps = 3/198 (1%)
 Frame = +3

Query: 30  AFTGSAVSSKSGVRAKAARAVVDVRAEKKIRVAINGFGRIGRNFLALLARSPEHPGWTWL 209
           +F  SA+ S  G R     A        K++VAINGFGRIGRNFL       + P     
Sbjct: 41  SFQTSAMGSSGGYRKGVTEA--------KLKVAINGFGRIGRNFLRCWHGRKDSPLDIIA 92

Query: 210 PSTTAAVSSSASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLAAAPGRR* 389
            + T  V   ASHLLKYDSTLG F ADVK   ++ ISVDGK I++VS+R+P +  P +  
Sbjct: 93  INDTGGVKQ-ASHLLKYDSTLGIFDADVKPSGETAISVDGKIIQVVSNRNP-SLLPWKEL 150

Query: 390 TSTWSLRALVSSLTRLAAVQAHPGRCLQGADHR---PRPRDKDIPTFVVGVNEGDYKHEY 560
                   +V   T +   +   G+ ++    +     P   DIPT+VVGVN   Y H+ 
Sbjct: 151 GID-----IVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAYSHDE 205

Query: 561 PIISNASCTTNCLAPFVK 614
           PIISNASCTTNCLAPFVK
Sbjct: 206 PIISNASCTTNCLAPFVK 223

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = +1

Query: 448 KHIQAGASKVLITAPGQGTRTSPPSWSV*TRATT-STSTPSSPTPRAPPTAWPPSSRVLE 624
           KHI+AGA KV+ITAPG+G     P++ V   A   S   P             P  +VL+
Sbjct: 170 KHIEAGAKKVIITAPGKG---DIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLD 226

Query: 625 QKFGIVKGTMTTTHSYT 675
           QKFGI+KGTMTTTHSYT
Sbjct: 227 QKFGIIKGTMTTTHSYT 243

>pir||T09668 glyceraldehyde-3-phosphate dehydrogenase (NADP)  (phosphorylating)
            (EC 1.2.1.13) precursor - Scotch pine
            gi|435103|gb|AAA33780.1| glyceraldehyde-phosphate
            dehydrogenase
          Length = 411

 Score =  248 bits (632), Expect(2) = 3e-94
 Identities = 125/144 (86%), Positives = 136/144 (93%)
 Frame = +2

Query: 677  GDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVV 856
            GDQRLLDASHRDLRRARAAALNIVPT+TGAAKAV+LVLPSLKGKLNGIALRVPTP VSVV
Sbjct: 258  GDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVV 317

Query: 857  DLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVM 1036
            DLVVQVEKKTFAEEVNAAFRE A+  +KG+L V D PLVSIDF+C+D S+++D+SLTMVM
Sbjct: 318  DLVVQVEKKTFAEEVNAAFRETADKELKGILAVCDEPLVSIDFRCSDVSSTVDSSLTMVM 377

Query: 1037 GDDMVKVVAWYDNEWGYSQRVVDL 1108
            GDDMVKVVAWYDNEWGYSQRVVDL
Sbjct: 378  GDDMVKVVAWYDNEWGYSQRVVDL 401

 Score =  121 bits (303), Expect(2) = 3e-94
 Identities = 92/203 (45%), Positives = 109/203 (53%), Gaps = 5/203 (2%)
 Frame = +3

Query: 21  QKSAFTGSAVSSKSGVRAKAARAVVDVRAEKKIRVAINGFGRIGRNFLALLARSPEHPGW 200
           Q  AF  +AV S SG +    R VV    E KI+VAINGFGRIGRNFL       + P  
Sbjct: 53  QLVAFQTNAVGS-SGQK----RGVV----EAKIKVAINGFGRIGRNFLRCWHGRKDSPLD 103

Query: 201 TWLPSTTAAVSSSASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLAAAPG 380
             + + T  V   ASHLLKYDS LGTF  DV++  +  ISVDGK IK+VS R+P+     
Sbjct: 104 VVVINDTGGVKQ-ASHLLKYDSILGTFDPDVQVAGNDGISVDGKVIKVVSDRNPV----- 157

Query: 381 RR*TSTWSLRA--LVSSLTRLAAVQAHPGRCLQGADHR---PRPRDKDIPTFVVGVNEGD 545
                 W      LV     +   +   G+ LQ    +     P   DIPT+V GVNE  
Sbjct: 158 ---NLPWKDYEIDLVIEGPGVFVDREGAGKHLQAGAKKVLITAPGKGDIPTYVCGVNEDK 214

Query: 546 YKHEYPIISNASCTTNCLAPFVK 614
           Y     IISNASCTTNCLAPFVK
Sbjct: 215 YYPAEEIISNASCTTNCLAPFVK 237

 Score = 60.8 bits (146), Expect(2) = 4e-16
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 10/86 (11%)
 Frame = +1

Query: 448 KHIQAGASKVLITAPGQGTRTSP----------PSWSV*TRATTSTSTPSSPTPRAPPTA 597
           KH+QAGA KVLITAPG+G   +           P+  + + A+ +T+  +          
Sbjct: 184 KHLQAGAKKVLITAPGKGDIPTYVCGVNEDKYYPAEEIISNASCTTNCLA---------- 233

Query: 598 WPPSSRVLEQKFGIVKGTMTTTHSYT 675
             P  +VL+QKFGI+KGTMTTTHSYT
Sbjct: 234 --PFVKVLDQKFGIIKGTMTTTHSYT 257

 Score = 47.0 bits (110), Expect(2) = 4e-16
 Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
 Frame = +2

Query: 197 LDVVAINDSGGVKQCQ-------------PPAEVRLHPGHVRRRC*DRRRQPHLGGRQAD 337
           LDVV IND+GGVKQ               P  +V  + G              + G+   
Sbjct: 102 LDVVVINDTGGVKQASHLLKYDSILGTFDPDVQVAGNDGI------------SVDGKVIK 149

Query: 338 QDCVQPRPPGSCPWKEMNIDLVIEGTGVFIDKVG 439
              V  R P + PWK+  IDLVIEG GVF+D+ G
Sbjct: 150 --VVSDRNPVNLPWKDYEIDLVIEGPGVFVDREG 181

>emb|CAC80392.1| glyceraldehyde-3-phosphate dehydrogenase [Spirogyra sp.]
          Length = 318

 Score =  237 bits (605), Expect(2) = 4e-92
 Identities = 122/137 (89%), Positives = 128/137 (93%)
 Frame = +2

Query: 677  GDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVV 856
            GDQRLLDASHRDLRRARAAALNIVPT+TGAAKAVSLVLPSLKGKLNGIALRVPTP VSVV
Sbjct: 182  GDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPSLKGKLNGIALRVPTPNVSVV 241

Query: 857  DLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVM 1036
            DLV+Q EKKTFAEEVNAAFREAA GPMKGVL V D PLVSIDF+C+D S +ID+SLTMVM
Sbjct: 242  DLVIQTEKKTFAEEVNAAFREAAAGPMKGVLAVCDEPLVSIDFRCSDVSCTIDSSLTMVM 301

Query: 1037 GDDMVKVVAWYDNEWGY 1087
            GDDMVKVVAWYDNE GY
Sbjct: 302  GDDMVKVVAWYDNELGY 318

 Score =  124 bits (312), Expect(2) = 4e-92
 Identities = 80/168 (47%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
 Frame = +3

Query: 120 RVAINGFGRIGRNFLALLARSPEHPGWTWLPSTTAAVSSSASHLLKYDSTLGTFAADVKI 299
           +V INGFGRIGRNF+       + P      + T  V  +A HLLKYDS LG F ADVKI
Sbjct: 1   KVGINGFGRIGRNFIRCWHGRDDSPLEVIAINDTGGVKQAA-HLLKYDSMLGIFNADVKI 59

Query: 300 VDDSHISVDGKQIKIVSSRDPLAAAPGRR*TSTWSLRALVSSLTRLAAVQAHPGRCLQGA 479
            DD+ ISVDGK IK+VS R+PL    G           LV   T +       G+ ++  
Sbjct: 60  ADDNSISVDGKIIKVVSDRNPLNLPWGEMGID------LVIEGTGVFIDGPGAGKHIEAG 113

Query: 480 DHR---PRPRDKDIPTFVVGVNEGDYKHEYPIISNASCTTNCLAPFVK 614
             +     P    IPT+VVGVN   Y H  PIISNASCTTNCLAPFVK
Sbjct: 114 AKKVLITAPGKGPIPTYVVGVNADKYVHSEPIISNASCTTNCLAPFVK 161

 Score = 65.5 bits (158), Expect(2) = 2e-17
 Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = +1

Query: 448 KHIQAGASKVLITAPGQGTRTSPPSWSV*TRATTST-STPSSPTPRAPPTAWPPSSRVLE 624
           KHI+AGA KVLITAPG+G     P++ V   A     S P             P  ++LE
Sbjct: 108 KHIEAGAKKVLITAPGKGPI---PTYVVGVNADKYVHSEPIISNASCTTNCLAPFVKILE 164

Query: 625 QKFGIVKGTMTTTHSYT 675
           +KFGI+KGTMTTTHSYT
Sbjct: 165 EKFGIIKGTMTTTHSYT 181

 Score = 47.0 bits (110), Expect(2) = 2e-17
 Identities = 37/96 (38%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
 Frame = +2

Query: 197 LDVVAINDSGGVKQCQPPAEVRLHPGHVRRRC*DRRRQPHLGGRQADQDC---------- 346
           L+V+AIND+GGVKQ            H+ +          LG   AD             
Sbjct: 26  LEVIAINDTGGVKQA----------AHLLKY------DSMLGIFNADVKIADDNSISVDG 69

Query: 347 -----VQPRPPGSCPWKEMNIDLVIEGTGVFIDKVG 439
                V  R P + PW EM IDLVIEGTGVFID  G
Sbjct: 70  KIIKVVSDRNPLNLPWGEMGIDLVIEGTGVFIDGPG 105

>sp|P50362|G3PA_CHLRE Glyceraldehyde 3-phosphate dehydrogenase A, chloroplast precursor
            (NADP-dependent glyceraldehydephosphate dehydrogenase
            subunit A) gi|7431527|pir||T07990
            glyceraldehyde-3-phosphate dehydrogenase (NADP)
            (phosphorylating) (EC 1.2.1.13) A, chloroplast -
            Chlamydomonas reinhardtii gi|1181548|gb|AAA86855.1|
            glyceraldehyde-3-phosphate dehydrogenase
          Length = 374

 Score =  320 bits (820), Expect = 3e-86
 Identities = 196/316 (62%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
 Frame = +2

Query: 197  LDVVAINDSGGVKQCQP-----------PAEVRL-HPGHVRRRC*DRRRQPHLGGRQADQ 340
            LDVVAINDSGGVKQ               A+V++    H+            + G+Q   
Sbjct: 64   LDVVAINDSGGVKQASHLLKYDSTLGTFAADVKIVDDSHIS-----------VDGKQIK- 111

Query: 341  DCVQPRPPGSCPWKEMNIDLVIEGTGVFIDKVGCCASTSRPVPPRC*SPPPAKGQGHPHL 520
              V  R P   PWKEMNIDLVIEGTGVFIDKVG      +    +     PAK +  P  
Sbjct: 112  -IVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGA-GKHIQAGASKVLITAPAKDKDIPTF 169

Query: 521  RGRCERGRLQARVPHHLQRLVHHQLPGPLRQGCWSRSSASSRAR*PPPTPTPGDQRLLDA 700
                  G  +   P             P  +    +            + T GDQRLLDA
Sbjct: 170  VVGVNEGDYKHEYPIISNASCTTNCLAPFVKVLEQKFGIVKGTMTTTHSYT-GDQRLLDA 228

Query: 701  SHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVVDLVVQVEK 880
            SHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVVDLVVQVEK
Sbjct: 229  SHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVVDLVVQVEK 288

Query: 881  KTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVV 1060
            KTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVV
Sbjct: 289  KTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVV 348

Query: 1061 AWYDNEWGYSQRVVDL 1108
            AWYDNEWGYSQRVVDL
Sbjct: 349  AWYDNEWGYSQRVVDL 364

 Score =  238 bits (606), Expect = 2e-61
 Identities = 143/210 (68%), Positives = 151/210 (71%), Gaps = 7/210 (3%)
 Frame = +3

Query: 6   MAAMMQKSAFTGSAVSSKSGVRAKAARAVVDVRAEKKIRVAINGFGRIGRNFLALLARSP 185
           MAAMMQKSAFTGSAVSSKSGVRAKAARAVVDVRAEKKIRVAINGFGRIGRNFL       
Sbjct: 1   MAAMMQKSAFTGSAVSSKSGVRAKAARAVVDVRAEKKIRVAINGFGRIGRNFLRCW---- 56

Query: 186 EHPGWTWLPSTTAAVSS----SASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSS 353
            H     L    A   S     ASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSS
Sbjct: 57  -HGRQNTLLDVVAINDSGGVKQASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSS 115

Query: 354 RDPLAAAPGRR*TSTWSLRALVSSLTRLAA---VQAHPGRCLQGADHRPRPRDKDIPTFV 524
           RDPL   P +       +      + ++ A   +QA   + L  A      +DKDIPTFV
Sbjct: 116 RDPL-QLPWKEMNIDLVIEGTGVFIDKVGAGKHIQAGASKVLITAP----AKDKDIPTFV 170

Query: 525 VGVNEGDYKHEYPIISNASCTTNCLAPFVK 614
           VGVNEGDYKHEYPIISNASCTTNCLAPFVK
Sbjct: 171 VGVNEGDYKHEYPIISNASCTTNCLAPFVK 200

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 64/191 (33%), Positives = 77/191 (39%), Gaps = 21/191 (10%)
 Frame = +1

Query: 166 RCWHGRQNTLA-------GRGCHQRQRRCQAVPATC*STTPPWARSPPMLRSSTTATS-- 318
           RCWHGRQNTL          G  Q     +       ST   +A    ++  S  +    
Sbjct: 54  RCWHGRQNTLLDVVAINDSGGVKQASHLLKYD-----STLGTFAADVKIVDDSHISVDGK 108

Query: 319 --RWTASRSRLCPAATPWQ-----LPLEG-----DEHRPGH*GHWCLH*QGWLLCKHIQA 462
             +  +SR    P   PW+     L +EG     D+   G               KHIQA
Sbjct: 109 QIKIVSSRD---PLQLPWKEMNIDLVIEGTGVFIDKVGAG---------------KHIQA 150

Query: 463 GASKVLITAPGQGTRTSPPSWSV*TRATTSTSTPSSPTPRAPPTAWPPSSRVLEQKFGIV 642
           GASKVLITAP +  +  P               P             P  +VLEQKFGIV
Sbjct: 151 GASKVLITAPAKD-KDIPTFVVGVNEGDYKHEYPIISNASCTTNCLAPFVKVLEQKFGIV 209

Query: 643 KGTMTTTHSYT 675
           KGTMTTTHSYT
Sbjct: 210 KGTMTTTHSYT 220

>emb|CAC80388.1| glyceraldehyde-3-phosphate dehydrogenase [Marchantia polymorpha]
          Length = 400

 Score =  277 bits (708), Expect = 3e-73
 Identities = 175/330 (53%), Positives = 205/330 (62%), Gaps = 26/330 (7%)
 Frame = +2

Query: 197  LDVVAINDSGGVKQCQP----PAEVRLHPGHVRRRC*DRRRQPHLGGRQADQD-----CV 349
            L+VV IND+GGVKQ        + + +   +V+           +G      D      V
Sbjct: 90   LEVVVINDTGGVKQASHLLKYDSMLGIFDAYVKA----------VGDDAISVDGKIIKIV 139

Query: 350  QPRPPGSCPWKEMNIDLVIEGTGVFIDKVGCCASTSRPVPPRC*SPPPAKGQGHPHLRGR 529
              R P + PW EM +DLVIEGTGVF+DK G      +    +     P KG    ++ G 
Sbjct: 140  SDRNPLNLPWGEMGVDLVIEGTGVFVDKEGA-GKHLQAGAKKVLITAPGKGPIPTYVIG- 197

Query: 530  CERGRLQARVPHHLQRLVHHQLPGPLRQGCWSRSSASSRAR*P--------------PPT 667
                             V+ +L  P  Q   S +S ++    P                T
Sbjct: 198  -----------------VNEELYDPSEQ-IISNASCTTNCLAPFVKVLDEKFGIIKGTMT 239

Query: 668  PT---PGDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPT 838
             T    GDQRLLDASHRDLRRARAAALNIVPT+TGAAKAV+LVLP+LKGKLNGIALRVPT
Sbjct: 240  TTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 299

Query: 839  PTVSVVDLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDA 1018
            P VSVVDLVVQVEKKTFAEEVNAAFREAANG MKG+L V D PLVS+DF+CTD S+++D+
Sbjct: 300  PNVSVVDLVVQVEKKTFAEEVNAAFREAANGDMKGILAVCDEPLVSVDFRCTDVSSTVDS 359

Query: 1019 SLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 1108
            SLTMVMGDDMVKVVAWYDNEWGYSQRVVDL
Sbjct: 360  SLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 389

 Score =  126 bits (317), Expect = 6e-28
 Identities = 91/196 (46%), Positives = 104/196 (52%), Gaps = 3/196 (1%)
 Frame = +3

Query: 36  TGSAVSSKSGVRAKAARAVVDVRAEKKIRVAINGFGRIGRNFLALLARSPEHPGWTWLPS 215
           T  A  S   V     RAVV    E K++VAINGFGRIGRNF+       + P    + +
Sbjct: 41  TRVAAQSAVAVSGAQKRAVV----EAKVKVAINGFGRIGRNFIRCWHGRKDSPLEVVVIN 96

Query: 216 TTAAVSSSASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLAAAPGRR*TS 395
            T  V   ASHLLKYDS LG F A VK V D  ISVDGK IKIVS R+PL    G     
Sbjct: 97  DTGGVKQ-ASHLLKYDSMLGIFDAYVKAVGDDAISVDGKIIKIVSDRNPLNLPWGEMGVD 155

Query: 396 TWSLRALVSSLTRLAAVQAHPGRCLQGADHR---PRPRDKDIPTFVVGVNEGDYKHEYPI 566
                 LV   T +   +   G+ LQ    +     P    IPT+V+GVNE  Y     I
Sbjct: 156 ------LVIEGTGVFVDKEGAGKHLQAGAKKVLITAPGKGPIPTYVIGVNEELYDPSEQI 209

Query: 567 ISNASCTTNCLAPFVK 614
           ISNASCTTNCLAPFVK
Sbjct: 210 ISNASCTTNCLAPFVK 225

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 10/86 (11%)
 Frame = +1

Query: 448 KHIQAGASKVLITAPGQGTRTS----------PPSWSV*TRATTSTSTPSSPTPRAPPTA 597
           KH+QAGA KVLITAPG+G   +           PS  + + A+ +T+  +          
Sbjct: 172 KHLQAGAKKVLITAPGKGPIPTYVIGVNEELYDPSEQIISNASCTTNCLA---------- 221

Query: 598 WPPSSRVLEQKFGIVKGTMTTTHSYT 675
             P  +VL++KFGI+KGTMTTTHSYT
Sbjct: 222 --PFVKVLDEKFGIIKGTMTTTHSYT 245



EST assemble image


clone accession position
1 HC037g02_r AV634776 1 687
2 HC054g04_r AV636065 10 610
3 HC094g08_r AV639083 16 375
4 MXL056d12_r BP096313 23 621
5 MXL096h06_r BP098646 24 506
6 HC080b11_r AV637978 29 596
7 HCL026b07_r AV641009 98 561
8 HC025d11_r AV633801 98 657
9 HC025b06_r AV633778 98 675
10 HCL078c07_r AV643910 99 610
11 MX231g09_r BP090966 102 220
12 HCL041a12_r AV641834 102 574
13 HC058c06_r AV636343 103 599
14 HC007d10_r AV632377 103 680
15 HC044a03_r AV635259 104 644
16 HC058a12_r AV636331 104 539
17 HC018f01_r AV633254 104 622
18 CM083e11_r AV392199 106 645
19 HCL027e06_r AV641086 106 680
20 HCL028f05_r AV641150 107 701
21 HCL064b03_r AV643120 110 645
22 HC093c06_r AV638972 110 564
23 HC031d12_r AV634285 110 623
24 MXL054e09_r BP096203 111 537
25 HC041e04_r AV635070 113 571
26 MXL027g10_r BP094705 115 387
27 HC044e03_r AV635294 116 623
28 HCL003c11_r AV639700 118 382
29 HC100d02_r AV639514 130 582
30 HCL070g11_r AV643505 148 593
31 HC052e11_r AV635910 159 392
32 HC092h03_r AV638940 167 644
33 CM079h08_r AV392000 205 715
34 HC098c07_r AV639352 215 732
35 MX244d03_r BP091791 238 670
36 HC095g10_r AV639167 283 774
37 HC028d11_r AV634038 289 845
38 MX226a11_r BP090587 316 704
39 MX243d10_r BP091735 321 785
40 HC005d02_r AV632212 333 894
41 MX236h09_r BP091322 371 677
42 HC040h09_r AV635023 395 936
43 MX234d01_r BP091137 400 632
44 HC095a07_r AV639103 422 786
45 HC053d11_r AV635967 536 1022
46 CM022d04_r AV387852 555 1165
47 HC095d02_r AV639130 617 1049
48 MX024a01_r BP087051 625 1053
49 HC093b06_r AV638961 648 1066
50 HC043c02_r AV635199 670 1251
51 CM064a01_r AV390972 673 1247
52 HC071d10_r AV637307 705 1255
53 MX235e08_r BP091219 715 995
54 MX226c02_r BP090596 715 1170
55 HC017h04_r AV633193 716 1199
56 MX005f01_r BP086275 722 1110
57 HC009f10_r AV632559 730 1225
58 HC021e02_r AV633495 739 1199




Chlamydomonas reinhardtii
Kazusa DNA Research Institute