Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001120A_C01 KCC001120A_c01
(578 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO61142.1| NADH dehydrogenase subunit 4L [Chlamydomonas rein... 336 2e-91
ref|XP_310637.1| ENSANGP00000020730 [Anopheles gambiae] gi|21294... 41 0.010
ref|NP_900451.1| hypothetical protein CV0781 [Chromobacterium vi... 39 0.040
ref|NP_919331.1| Mafa homolog; Mafa homolog (avian) [Mus musculu... 39 0.052
ref|NP_741698.1| putative protein (80.3 kD) (5T676) [Caenorhabdi... 39 0.068
>gb|AAO61142.1| NADH dehydrogenase subunit 4L [Chlamydomonas reinhardtii]
gi|28932863|gb|AAO61143.1| NADH dehydrogenase subunit 4L
[Chlamydomonas reinhardtii]
Length = 227
Score = 336 bits (861), Expect = 2e-91
Identities = 169/171 (98%), Positives = 170/171 (98%)
Frame = +2
Query: 26 MSRTQLLRRLLPGVPGTPGLFSQSCTAVPNGLQQCGFFSSHEEEQKQQSSLQPASSSLVQ 205
MSRTQLLRRLLPGVPGTPGLFSQSCTAVPNGLQQCGFFSSHEEEQKQQSSLQPASSSLVQ
Sbjct: 1 MSRTQLLRRLLPGVPGTPGLFSQSCTAVPNGLQQCGFFSSHEEEQKQQSSLQPASSSLVQ 60
Query: 206 FANIVNRPMPVPLATAAGFAASPLMAMPARRGAGVMGVRRPALPMLPGMGPTTTPSAALA 385
FANIVNRPMPVPLATAAGFAASPLMAMPARRGAGVMGVRRPALPMLPGMGPTTTPSAALA
Sbjct: 61 FANIVNRPMPVPLATAAGFAASPLMAMPARRGAGVMGVRRPALPMLPGMGPTTTPSAALA 120
Query: 386 RSYYTEGEIFGTTFMYTTNMMFWAGIVGAVAFRRNLIILLLSAETVMLAAH 538
RSYYTEGEIFGTTFMYTTNMMFWAGIVGAVAFRRNLIILLLSAETVMLA +
Sbjct: 121 RSYYTEGEIFGTTFMYTTNMMFWAGIVGAVAFRRNLIILLLSAETVMLACN 171
>ref|XP_310637.1| ENSANGP00000020730 [Anopheles gambiae] gi|21294151|gb|EAA06296.1|
ENSANGP00000020730 [Anopheles gambiae str. PEST]
Length = 255
Score = 41.2 bits (95), Expect = 0.010
Identities = 32/104 (30%), Positives = 40/104 (37%), Gaps = 14/104 (13%)
Frame = -2
Query: 532 SKHHRLRTEQQDDEVAPECHRAHDTGPEHH------------VCGVHERGAENLALCVVR 389
++HH TE + CH +HDTGP H VC +H RG A V
Sbjct: 60 NRHHHATTEGHCVHLWRNCHHSHDTGPHLHRLADGGELAPGPVCALH-RGGVRAAATVQP 118
Query: 388 AGQG--CRGRGCGTHAGQHWQSWTPDSHHARASPSWHCHERGGS 263
AG G C H G HHAR + H +R G+
Sbjct: 119 AGSGRLLSEPRCRLHQGDGGAL----HHHARYRCAGHLPDRAGA 158
>ref|NP_900451.1| hypothetical protein CV0781 [Chromobacterium violaceum ATCC 12472]
gi|34102090|gb|AAQ58457.1| hypothetical protein CV0781
[Chromobacterium violaceum ATCC 12472]
Length = 410
Score = 39.3 bits (90), Expect = 0.040
Identities = 37/125 (29%), Positives = 47/125 (37%), Gaps = 2/125 (1%)
Frame = -2
Query: 406 ALCVVRAGQGCRGRGCGTHAGQHWQSWTPDSHHARASPSWHCHERGGSEARSGGKRHGHG 227
A C RAG R C + WT + ARAS + H G G +
Sbjct: 66 ASCAWRAGASRRAASCAAATAGCGRRWTSLAATARASWRYGWHGAAGWTGNGGSR----- 120
Query: 226 PVDNVCELHERRGSRLQAALLLLLL--LVAAEKAALLQAIWHSGARLREEARRAGHAGKQ 53
PV C +RG+ L LL + L LV A A L A+ S R+ E H +
Sbjct: 121 PVSGRCGPRRQRGALLLGILLAVALTSLVLALSVAALAAVQRS-VRVAEHRLARSHDARW 179
Query: 52 TPEQL 38
QL
Sbjct: 180 ALRQL 184
>ref|NP_919331.1| Mafa homolog; Mafa homolog (avian) [Mus musculus]
gi|23503735|dbj|BAC20390.1| pancreatic beta-cell
specific transcriptional activator [Mus musculus]
Length = 359
Score = 38.9 bits (89), Expect = 0.052
Identities = 23/64 (35%), Positives = 25/64 (38%)
Frame = -2
Query: 385 GQGCRGRGCGTHAGQHWQSWTPDSHHARASPSWHCHERGGSEARSGGKRHGHGPVDNVCE 206
G G G G H G H T HH+ H H GGS GG HG G +
Sbjct: 172 GGGADDMGAGHHHGAHH---TAHHHHSAHHHHHHHHHHGGSGHHGGGAGHGGGGAGHHVR 228
Query: 205 LHER 194
L ER
Sbjct: 229 LEER 232
>ref|NP_741698.1| putative protein (80.3 kD) (5T676) [Caenorhabditis elegans]
gi|11359776|pir||T45059 hypothetical protein Y39B6B.gg
[imported] - Caenorhabditis elegans
gi|15209353|emb|CAC51077.1| Hypothetical protein
Y39B6A.1 [Caenorhabditis elegans]
Length = 735
Score = 38.5 bits (88), Expect = 0.068
Identities = 25/80 (31%), Positives = 31/80 (38%)
Frame = +1
Query: 277 HGNASSARRGRDGSQASSSANAARHGSHNHALCSPGPLLLHRGRDFRHHVHVHHKHDVLG 456
HG+ S A G G + A+ HG H+HA G H G HH H H H
Sbjct: 447 HGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHG----HHGEHGTHHGH-HGSHHSPA 501
Query: 457 RYRGRGGIQAQPHHPAAQCG 516
+ G + HH A G
Sbjct: 502 HH----GHHGEHHHAPAHHG 517
Score = 33.9 bits (76), Expect = 1.7
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Frame = +1
Query: 277 HGNASSARRGRDGSQASSSANAARHGSHNHALCSPGPLLLHRGRDFRHHVHVHH-KHDVL 453
H A G S A+ HG H+HA G H G HH HH H
Sbjct: 434 HAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHG----HHGE--HHHAPAHHGHHGEH 487
Query: 454 GRYRGRGGIQAQPHH 498
G + G G P H
Sbjct: 488 GTHHGHHGSHHSPAH 502
Score = 33.5 bits (75), Expect = 2.2
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = +1
Query: 229 HARAACHRCGLRCLPSHGNASSARRGRDGSQASSSANAARHGSHNHALCSPGPLLLHRGR 408
H R G P+H G G + A+ H SH H SP H
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAH---HGHH 458
Query: 409 DFRHHVHVHHKH 444
HH HH H
Sbjct: 459 GEHHHAPAHHGH 470
Score = 33.1 bits (74), Expect = 2.9
Identities = 25/83 (30%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Frame = +1
Query: 277 HGNASSARRGRDGSQASSSANAARHGSHNHALCSPGPLLLHRGRDFRHHVH--------V 432
H G GS S A+ HG H+HA G H G HH H
Sbjct: 483 HHGEHGTHHGHHGSH-HSPAHHGHHGEHHHAPAHHG----HHGEHGTHHGHHGEHHHAPA 537
Query: 433 HH-KHDVLGRYRGRGGIQAQPHH 498
HH H G + G G P H
Sbjct: 538 HHGHHGEHGTHHGHHGSHHSPAH 560
Score = 32.3 bits (72), Expect = 4.9
Identities = 26/96 (27%), Positives = 30/96 (31%)
Frame = -2
Query: 475 HRAHDTGPEHHVCGVHERGAENLALCVVRAGQGCRGRGCGTHAGQHWQSWTPDSHHARAS 296
H +H G HH H E+ G G G G H G H +HH A
Sbjct: 590 HESHGHG--HHAPAHHGHHGEH------GVHHGHHGAGYGAHHGHH------GAHHHHAP 635
Query: 295 PSWHCHERGGSEARSGGKRHGHGPVDNVCELHERRG 188
H G S G HGH + H G
Sbjct: 636 HHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHG 671
Score = 32.3 bits (72), Expect = 4.9
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Frame = +1
Query: 277 HGNASSARRGRDGSQ---ASSSANAARHGSHNHALCSPGPLLLHRGRDFRHHVHVHHKHD 447
HG A G G+ A + HG H+H G +H G HH HH
Sbjct: 616 HGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHH-----GSHGVHHGHHGTHHSLAHH--- 667
Query: 448 VLGRYRGRGGIQAQPHHPA 504
G + G G H PA
Sbjct: 668 --GHHGGHGTHHGAHHSPA 684
