KCC001107A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001107A_C01 KCC001107A_c01
ctgcgacctggacaagttcggcaacttcctgtccagccactacatccccaaccgcgtcat
cgtggactgcaccgcctcggACGCGCCCGCCTCCAAGTACATGACCTGGATGCAGCAGGG
CATCCACGTGGTCACGCCCAACAAGAAGCTGGGCAGCGGGCCGCTGGACCAGTACCAGGC
GGTGCGCCGCATGCAGCGCGAGGGCTACATCCACTTCTTCTACGAGGGCACTGTGGGCGC
GGGCCTGCCTGTGATCGGCACTCTGAAGCACCTGCTGGAGACTGGCGACAAGATCATCAA
GATTGAGGGCATCCTGTCCGGCACCCTGTCCTACATCTTCAACACCTACCAGCCCGGCAT
GAAGTTCAGCGAGGTGGTGGCGGACGCGCGGTCCAAGGGCTACACCGAGCCCGACCCGCG
CGACGACCTCAACGGCACCGACGTGGCGCGCAAGGTGGCCATCCTGGCCCGCGAGTGCGG
CCTGATGCTGGAGCTGGACTCCATCCCCGTGCAGAGCCTGGTGCCGGAGCCGCTTCGCGC
CGTGGCCAGCAGCGCCGACTACATGGCGCGGCTGCCCGAGTTCGACGCCGACATGGACGC
CAAGCTGCGCGAGGCGGAGGCCAGCGGAGACTGCTTGAGATACGTGGGTGTGGTGGACGC
CCAGAACGGCAAGGGCAGCGTGGAGCTGCGCCGCTACCCCAAGTCCCACCCCTTTGCACA
GCTGCAGGGCAGCGACAACATCATCTCCTTCACCACCGCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001107A_C01 KCC001107A_c01
         (761 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T06246 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge...   330  1e-89
ref|NP_193706.1| aspartate kinase/homoserine dehydrogenase (ak-h...   329  3e-89
pir||T06242 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge...   329  3e-89
dbj|BAC43372.1| putative aspartate kinase-homoserine dehydrogena...   328  4e-89
ref|NP_174408.1| aspartate kinase/homoserine dehydrogenase (ak-h...   328  4e-89

>pir||T06246 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC 1.1.1.3)
            precursor - soybean (fragment) gi|2970556|gb|AAC05983.1|
            aspartokinase-homoserine dehydrogenase [Glycine max]
          Length = 909

 Score =  330 bits (847), Expect = 1e-89
 Identities = 159/241 (65%), Positives = 191/241 (78%)
 Frame = +2

Query: 35   SHYIPNRVIVDCTASDAPASKYMTWMQQGIHVVTPNKKLGSGPLDQYQAVRRMQREGYIH 214
            +H+IPN  +VDCTA  A A  Y  W+++GIHVVTPNKK  SGPLDQY  +R +QR+ Y H
Sbjct: 637  NHFIPNTALVDCTADSAIAGYYYDWLRKGIHVVTPNKKANSGPLDQYLKLRALQRQSYTH 696

Query: 215  FFYEGTVGAGLPVIGTLKHLLETGDKIIKIEGILSGTLSYIFNTYQPGMKFSEVVADARS 394
            +FYE TVGAGLP++ TL+ LLETGDKI++IEGI SGTLSYIFN ++ G  FSEVV++A+ 
Sbjct: 697  YFYEATVGAGLPIVSTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRAFSEVVSEAKE 756

Query: 395  KGYTEPDPRDDLNGTDVARKVAILARECGLMLELDSIPVQSLVPEPLRAVASSADYMARL 574
             GYTEPDPRDDL+GTDVARKV ILARE GL LEL +IPV+SLVPEPLRA AS+ ++M   
Sbjct: 757  AGYTEPDPRDDLSGTDVARKVIILARESGLKLELSNIPVESLVPEPLRACASAQEFMQEP 816

Query: 575  PEFDADMDAKLREAEASGDCLRYVGVVDAQNGKGSVELRRYPKSHPFAQLQGSDNIISFT 754
            P+FD +   K  +AE +G+ LRYVGVVD  N KG VELRRY K HPFAQL GSDNII+FT
Sbjct: 817  PKFDQEFTKKQEDAENAGEVLRYVGVVDVTNEKGVVELRRYKKDHPFAQLSGSDNIIAFT 876

Query: 755  T 757
            T
Sbjct: 877  T 877

>ref|NP_193706.1| aspartate kinase/homoserine dehydrogenase (ak-hsdh) bifunctional
            enzyme, putative [Arabidopsis thaliana]
            gi|7434564|pir||T04752 aspartate kinase (EC 2.7.2.4) /
            homoserine dehydrogenase (EC 1.1.1.3) T16H5.70 -
            Arabidopsis thaliana gi|3250680|emb|CAA19688.1| aspartate
            kinase-homoserine dehydrogenase-like protein [Arabidopsis
            thaliana] gi|7268767|emb|CAB78973.1| aspartate
            kinase-homoserine dehydrogenase-like protein [Arabidopsis
            thaliana]
          Length = 916

 Score =  329 bits (844), Expect = 3e-89
 Identities = 159/252 (63%), Positives = 199/252 (78%), Gaps = 1/252 (0%)
 Frame = +2

Query: 5    DLDKFGNFL-SSHYIPNRVIVDCTASDAPASKYMTWMQQGIHVVTPNKKLGSGPLDQYQA 181
            DLDKF   +  +H+IPN V+VDCTA  A AS+Y  W+++GIHV+TPNKK  SGPLDQY  
Sbjct: 626  DLDKFTQQVHGNHFIPNSVVVDCTADSAIASRYYDWLRKGIHVITPNKKANSGPLDQYLK 685

Query: 182  VRRMQREGYIHFFYEGTVGAGLPVIGTLKHLLETGDKIIKIEGILSGTLSYIFNTYQPGM 361
            +R +QR+ Y H+FYE TVGAGLP+I TL+ LLETGDKI++IEGI SGTLSY+FN +    
Sbjct: 686  LRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGICSGTLSYLFNNFVGDR 745

Query: 362  KFSEVVADARSKGYTEPDPRDDLNGTDVARKVAILARECGLMLELDSIPVQSLVPEPLRA 541
             FSEVV +A++ G+TEPDPRDDL+GTDVARKV ILARE GL L+L  +P++SLVPEPL+ 
Sbjct: 746  SFSEVVTEAKNAGFTEPDPRDDLSGTDVARKVIILARESGLKLDLADLPIRSLVPEPLKG 805

Query: 542  VASSADYMARLPEFDADMDAKLREAEASGDCLRYVGVVDAQNGKGSVELRRYPKSHPFAQ 721
              S  ++M +LP++D D+  +  +AE SG+ LRYVGVVDA N KG+VELRRY K HPFAQ
Sbjct: 806  CTSVEEFMEKLPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQ 865

Query: 722  LQGSDNIISFTT 757
            L GSDNII+FTT
Sbjct: 866  LAGSDNIIAFTT 877

>pir||T06242 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC 1.1.1.3)
            precursor - soybean chloroplast gi|2970447|gb|AAC05981.1|
            aspartokinase-homoserine dehydrogenase [Glycine max]
          Length = 916

 Score =  329 bits (844), Expect = 3e-89
 Identities = 160/252 (63%), Positives = 196/252 (77%), Gaps = 1/252 (0%)
 Frame = +2

Query: 5    DLDKFGNFL-SSHYIPNRVIVDCTASDAPASKYMTWMQQGIHVVTPNKKLGSGPLDQYQA 181
            +++KF   +  +H+IPN  +VDCTA    A  Y  W+++GIHVVTPNKK  SGPLDQY  
Sbjct: 626  NMEKFVQHVHGNHFIPNTALVDCTADSVIAGYYYDWLRKGIHVVTPNKKANSGPLDQYLK 685

Query: 182  VRRMQREGYIHFFYEGTVGAGLPVIGTLKHLLETGDKIIKIEGILSGTLSYIFNTYQPGM 361
            +R +QR+ Y H+FYE TVGAGLP++ TL+ LLETGDKI++IEGI SGTLSYIFN ++ G 
Sbjct: 686  LRALQRQSYTHYFYEATVGAGLPIVSTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGR 745

Query: 362  KFSEVVADARSKGYTEPDPRDDLNGTDVARKVAILARECGLMLELDSIPVQSLVPEPLRA 541
             FSEVV++A+  GYTEPDPRDDL+GTDVARKV ILARE GL LEL +IPV+S VPEPLRA
Sbjct: 746  AFSEVVSEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSNIPVESPVPEPLRA 805

Query: 542  VASSADYMARLPEFDADMDAKLREAEASGDCLRYVGVVDAQNGKGSVELRRYPKSHPFAQ 721
             AS+ ++M  LP+FD +   K  +AE +G+ LRYVGVVD  N KG VELRRY K HPFAQ
Sbjct: 806  CASAQEFMQELPKFDQEFTKKQEDAENAGEVLRYVGVVDVTNKKGVVELRRYKKDHPFAQ 865

Query: 722  LQGSDNIISFTT 757
            L GSDNII+FTT
Sbjct: 866  LSGSDNIIAFTT 877

>dbj|BAC43372.1| putative aspartate kinase-homoserine dehydrogenase [Arabidopsis
            thaliana]
          Length = 911

 Score =  328 bits (842), Expect = 4e-89
 Identities = 158/252 (62%), Positives = 201/252 (79%), Gaps = 1/252 (0%)
 Frame = +2

Query: 5    DLDKFGNFLS-SHYIPNRVIVDCTASDAPASKYMTWMQQGIHVVTPNKKLGSGPLDQYQA 181
            D++KF  ++  +H+IPN V+VDCTA    AS Y  W+ +GIHVVTPNKK  SGPLDQY  
Sbjct: 621  DMEKFTQYVKGNHFIPNSVMVDCTADADIASCYYDWLLRGIHVVTPNKKANSGPLDQYLK 680

Query: 182  VRRMQREGYIHFFYEGTVGAGLPVIGTLKHLLETGDKIIKIEGILSGTLSYIFNTYQPGM 361
            +R +QR+ Y H+FYE TVGAGLP+I TL+ LLETGDKI++IEGI SGTLSY+FN +    
Sbjct: 681  IRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFVGTR 740

Query: 362  KFSEVVADARSKGYTEPDPRDDLNGTDVARKVAILARECGLMLELDSIPVQSLVPEPLRA 541
             FSEVVA+A+  G+TEPDPRDDL+GTDVARKV ILARE GL L+L+ +PVQ+LVP+PL+A
Sbjct: 741  SFSEVVAEAKQAGFTEPDPRDDLSGTDVARKVTILARESGLKLDLEGLPVQNLVPKPLQA 800

Query: 542  VASSADYMARLPEFDADMDAKLREAEASGDCLRYVGVVDAQNGKGSVELRRYPKSHPFAQ 721
             AS+ ++M +LP+FD ++  +  EAEA+G+ LRYVGVVDA   KG+VEL+RY K HPFAQ
Sbjct: 801  CASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQ 860

Query: 722  LQGSDNIISFTT 757
            L G+DNII+FTT
Sbjct: 861  LSGADNIIAFTT 872

>ref|NP_174408.1| aspartate kinase/homoserine dehydrogenase (ak-hsdh) bifunctional
            enzyme [Arabidopsis thaliana] gi|25288158|pir||E86438
            hypothetical protein F28K20.19 - Arabidopsis thaliana
            gi|4512620|gb|AAD21689.1| Identical to gb|X71364 gene for
            aspartate kinase homoserine dehydrogenase from
            Arabidopsis thaliana
          Length = 911

 Score =  328 bits (842), Expect = 4e-89
 Identities = 158/252 (62%), Positives = 201/252 (79%), Gaps = 1/252 (0%)
 Frame = +2

Query: 5    DLDKFGNFLS-SHYIPNRVIVDCTASDAPASKYMTWMQQGIHVVTPNKKLGSGPLDQYQA 181
            D++KF  ++  +H+IPN V+VDCTA    AS Y  W+ +GIHVVTPNKK  SGPLDQY  
Sbjct: 621  DMEKFTQYVKGNHFIPNSVMVDCTADADIASCYYDWLLRGIHVVTPNKKANSGPLDQYLK 680

Query: 182  VRRMQREGYIHFFYEGTVGAGLPVIGTLKHLLETGDKIIKIEGILSGTLSYIFNTYQPGM 361
            +R +QR+ Y H+FYE TVGAGLP+I TL+ LLETGDKI++IEGI SGTLSY+FN +    
Sbjct: 681  IRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFVGTR 740

Query: 362  KFSEVVADARSKGYTEPDPRDDLNGTDVARKVAILARECGLMLELDSIPVQSLVPEPLRA 541
             FSEVVA+A+  G+TEPDPRDDL+GTDVARKV ILARE GL L+L+ +PVQ+LVP+PL+A
Sbjct: 741  SFSEVVAEAKQAGFTEPDPRDDLSGTDVARKVTILARESGLKLDLEGLPVQNLVPKPLQA 800

Query: 542  VASSADYMARLPEFDADMDAKLREAEASGDCLRYVGVVDAQNGKGSVELRRYPKSHPFAQ 721
             AS+ ++M +LP+FD ++  +  EAEA+G+ LRYVGVVDA   KG+VEL+RY K HPFAQ
Sbjct: 801  CASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQ 860

Query: 722  LQGSDNIISFTT 757
            L G+DNII+FTT
Sbjct: 861  LSGADNIIAFTT 872



EST assemble image


clone accession position
1 CM039c09_r AV388970 1 559
2 HC018g04_r AV633268 154 666
3 CM018e11_r AV387224 238 725
4 HC070d04_r AV637226 304 761




Chlamydomonas reinhardtii
Kazusa DNA Research Institute