Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001095A_C01 KCC001095A_c01
(386 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_864303.1| hypothetical protein [Pirellula sp.] gi|3244315... 37 0.088
ref|XP_172961.1| hypothetical protein XP_172961 [Homo sapiens] 36 0.11
gb|AAL02425.2|AF237668_1 Rab11 family interaction protein 1 [Ory... 35 0.26
ref|ZP_00008113.1| COG0419: ATPase involved in DNA repair [Rhodo... 35 0.26
emb|CAE03445.1| OSJNBa0088H09.3 [Oryza sativa (japonica cultivar... 35 0.33
>ref|NP_864303.1| hypothetical protein [Pirellula sp.] gi|32443151|emb|CAD71982.1|
hypothetical protein [Pirellula sp.]
Length = 109
Score = 36.6 bits (83), Expect = 0.088
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 241 ARLVYCVVTCMATHLTPNTHLATL---THPIFRLRMPICAAGIVRRLPA 378
+RL V C LTP H+ L THPI L+ P+C R PA
Sbjct: 7 SRLALVTVLCSKPRLTPTAHIVALPPSTHPISNLQCPLCNLQSTRTRPA 55
>ref|XP_172961.1| hypothetical protein XP_172961 [Homo sapiens]
Length = 182
Score = 36.2 bits (82), Expect = 0.11
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 86 RPSCPVSTPFEVCDWRSAPLSTASNLPNYSPSSANP*PGSDFIP--VRRWPIPRRGL 250
RP CP + F +C PL + P+ SP S PG ++P WP P GL
Sbjct: 35 RPPCPTAVSFSICSPPKPPLFSMPQAPSVSPES----PGELWLPGWTVAWPGPSLGL 87
>gb|AAL02425.2|AF237668_1 Rab11 family interaction protein 1 [Oryctolagus cuniculus]
Length = 673
Score = 35.0 bits (79), Expect = 0.26
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 47 ITPFVNPKLSTDLRPSCPVSTPFEVCDWRSAPLSTASNLPNYSPSSANP*PGSDFIPVRR 226
++P PK PS P+++P + + +S++S+L +SP +A P S P++R
Sbjct: 126 VSPEAPPKARPSSPPSSPLASPRAPPEAEPSSISSSSSL--WSPIAA---PISTSTPIQR 180
Query: 227 WPIPRRG 247
WP P G
Sbjct: 181 WPSPGEG 187
>ref|ZP_00008113.1| COG0419: ATPase involved in DNA repair [Rhodobacter sphaeroides]
Length = 834
Score = 35.0 bits (79), Expect = 0.26
Identities = 21/62 (33%), Positives = 32/62 (50%)
Frame = -3
Query: 249 KPRRGMGQRRTGMKSEPGQGLAEDGE*LGRFDAVLNGAERQSHTSKGVDTGQDGRRSVDN 70
+P+ G G + G+ LAE LG LNG + Q +G + G++GRRS+D+
Sbjct: 651 RPQDGRPGEGEGQEGRDGRSLAERQRELGDR---LNGMQNQPLPGQGSERGENGRRSLDD 707
Query: 69 FG 64
G
Sbjct: 708 AG 709
>emb|CAE03445.1| OSJNBa0088H09.3 [Oryza sativa (japonica cultivar-group)]
Length = 1011
Score = 34.7 bits (78), Expect = 0.33
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = +1
Query: 235 SAARLVYCVVTCMATHLTPNTHLATLT------HPIFRLRMPICAAGIVRRLPA 378
+A +++C++ + ++TP LA L HP FR R+P RRLPA
Sbjct: 952 TAIFVLFCLIAAIVLYVTPLQVLAALAGFYVMRHPRFRYRLPSTPVNFFRRLPA 1005
