KCC001084A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001084A_C01 KCC001084A_c01
caagaaacttcactcatcttatcagcaaGCGACACATACAAAACAAAGTGTCTCTGCTGG
AAGCGTTGCTTCGTTTTGACTCTCTTGCTGTAGACCCAGTGCCCGTCGAGCTCTGGATAC
ATATCACCCGAAGTAGAAATCTACCTAGAGAATGGACGTGGAGCCAATCTTCTGCGCGGA
GCAGATTGTCATTCCGCACAACCTTGCGGACATTCTTAAAGCTTACACGAAAGAGGTCAT
CCGTCGGCAGCCAACGGACCTCATAGCATTCTCGGCAAAATACTTCACGAACCTCGCGAA
TGTGGCGTCTGGGGTATCAAACAGCAGCGCACCAGCTAAGGAGCAGCTACGGCAAGTGTA
TACACGAGGCGGCAGCGGCGGTGCTACGCTAACGGAGTCGCAGGTCACGGGCCTGTGCCA
GCAGGCCGGCATCGCGGACGCGGTGGTGGCCAAGGTGATGGAGGTGGGCGCCTTCACGCC
CGCCGCCGTGGACCTGTCCAAGTTCGTGTTCCTGTGCCTGGCTATGAGCTGCGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001084A_C01 KCC001084A_c01
         (534 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|EAA39937.1| GLP_479_56382_57002 [Giardia lamblia ATCC 50803]        58  9e-08
gb|AAH14607.1| AKAP-associated sperm protein [Homo sapiens]            53  2e-06
ref|NP_114122.2| AKAP-associated sperm protein [Homo sapiens]          53  2e-06
gb|AAG59587.1|AF239723_1 AKAP-associated sperm protein [Homo sap...    53  2e-06
ref|NP_665851.1| A-kinase anchoring protein-associated sperm pro...    52  5e-06

>gb|EAA39937.1| GLP_479_56382_57002 [Giardia lamblia ATCC 50803]
          Length = 206

 Score = 57.8 bits (138), Expect = 9e-08
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +2

Query: 161 EPIFCAEQIVIPHNLADILKAYTKEVIRRQPTDLIAFSAKYFTNLA 298
           E I+C+EQI IP+ L  I+K Y+K V+R QP+DLI FS KYF  L+
Sbjct: 3   ERIYCSEQITIPNQLPQIIKEYSKVVLREQPSDLIEFSIKYFKQLS 48

>gb|AAH14607.1| AKAP-associated sperm protein [Homo sapiens]
          Length = 230

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 32/87 (36%), Positives = 45/87 (50%)
 Frame = +2

Query: 161 EPIFCAEQIVIPHNLADILKAYTKEVIRRQPTDLIAFSAKYFTNLANVASGVSNSSAPAK 340
           + +FCA+QI IP  L DILK +TK  IR QP D++ +SA YF+ L+           P K
Sbjct: 5   DTMFCAQQIHIPPELPDILKQFTKAAIRTQPADVLRWSAGYFSALSR------GDPLPVK 58

Query: 341 EQLRQVYTRGGSGGATLTESQVTGLCQ 421
           +++            T T+   TGL Q
Sbjct: 59  DRMEM---------PTATQKTDTGLTQ 76

>ref|NP_114122.2| AKAP-associated sperm protein [Homo sapiens]
          Length = 230

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 32/87 (36%), Positives = 45/87 (50%)
 Frame = +2

Query: 161 EPIFCAEQIVIPHNLADILKAYTKEVIRRQPTDLIAFSAKYFTNLANVASGVSNSSAPAK 340
           + +FCA+QI IP  L DILK +TK  IR QP D++ +SA YF+ L+           P K
Sbjct: 5   DTMFCAQQIHIPPELPDILKQFTKAAIRTQPADVLRWSAGYFSALSR------GDPLPVK 58

Query: 341 EQLRQVYTRGGSGGATLTESQVTGLCQ 421
           +++            T T+   TGL Q
Sbjct: 59  DRMEM---------PTATQKTDTGLTQ 76

>gb|AAG59587.1|AF239723_1 AKAP-associated sperm protein [Homo sapiens]
          Length = 230

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 32/87 (36%), Positives = 45/87 (50%)
 Frame = +2

Query: 161 EPIFCAEQIVIPHNLADILKAYTKEVIRRQPTDLIAFSAKYFTNLANVASGVSNSSAPAK 340
           + +FCA+QI IP  L DILK +TK  IR QP D++ +SA YF+ L+           P K
Sbjct: 5   DTMFCAQQIHIPPELPDILKQFTKAAIRTQPADVLRWSAGYFSALSR------GDPLPVK 58

Query: 341 EQLRQVYTRGGSGGATLTESQVTGLCQ 421
           +++            T T+   TGL Q
Sbjct: 59  DRMEM---------PTATQKTDTGLTQ 76

>ref|NP_665851.1| A-kinase anchoring protein-associated sperm protein [Mus musculus]
           gi|11878218|gb|AAG40851.1| cAMP-dependent protein kinase
           regulatory subunit [Mus musculus]
          Length = 230

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%)
 Frame = +2

Query: 161 EPIFCAEQIVIPHNLADILKAYTKEVIRRQPTDLIAFSAKYFTNLA 298
           + +FCA+QI IP  L DILK +TK  IR QP D++ +SA YF+ L+
Sbjct: 5   DTMFCAQQIHIPPELPDILKQFTKAAIRTQPADVLQWSAGYFSALS 50



EST assemble image


clone accession position
1 HC070f01_r AV637243 1 545
2 MX204b04_r BP089268 29 463
3 CM016d12_r AV387499 106 624




Chlamydomonas reinhardtii
Kazusa DNA Research Institute