Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001051A_C02 KCC001051A_c02
(885 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q39572|YPT6_CHLRE Ras-related protein YPTC6 gi|1363476|pir||J... 430 e-119
ref|NP_172434.1| GTP-binding protein, putative [Arabidopsis thal... 312 5e-84
sp|P40393|RIC2_ORYSA Ras-related protein RIC2 gi|481506|pir||S38... 310 2e-83
gb|AAK15703.1| GTP-binding protein [Oryza sativa] 310 2e-83
sp|Q40193|R11C_LOTJA Ras-related protein Rab11C gi|1370146|emb|C... 310 2e-83
>sp|Q39572|YPT6_CHLRE Ras-related protein YPTC6 gi|1363476|pir||JC4108 GTP-binding
protein yptC6 - Chlamydomonas reinhardtii
gi|806728|gb|AAA82729.1| YptC6
Length = 216
Score = 430 bits (1106), Expect = e-119
Identities = 216/216 (100%), Positives = 216/216 (100%)
Frame = +3
Query: 63 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 242
MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT
Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60
Query: 243 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVI 422
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVI 120
Query: 423 MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKK 602
MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKK
Sbjct: 121 MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKK 180
Query: 603 VLDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 710
VLDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS
Sbjct: 181 VLDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>ref|NP_172434.1| GTP-binding protein, putative [Arabidopsis thaliana]
gi|3024516|sp|O04486|RB1C_ARATH Ras-related protein
Rab11C gi|25294114|pir||A86230 hypothetical protein
[imported] - Arabidopsis thaliana
gi|2160157|gb|AAB60720.1| Strong similarity to A.
thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene.
[Arabidopsis thaliana] gi|2231303|gb|AAB61994.1|
ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2
[Arabidopsis thaliana] gi|21553810|gb|AAM62903.1|
putative RAS-related protein RAB11C [Arabidopsis
thaliana] gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2
[Arabidopsis thaliana]
Length = 217
Score = 312 bits (799), Expect = 5e-84
Identities = 159/218 (72%), Positives = 182/218 (82%), Gaps = 2/218 (0%)
Frame = +3
Query: 63 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 242
M+ +PD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+G+T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 243 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVI 422
+KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TFENV RWLKELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 423 MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKK 602
ML+GNK+DLKHLR V TE AQ++ E+EGLSFIETSALE+ NVEKAFQ IL+E+Y I+SKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180
Query: 603 VLDSEDN--RPKIGEGRDVIVIDNAHDDGGKKKGGCCS 710
+ S+ I EG+ ID A K CCS
Sbjct: 181 SISSDQTTANANIKEGQ---TIDVAATSESNAKKPCCS 215
>sp|P40393|RIC2_ORYSA Ras-related protein RIC2 gi|481506|pir||S38741 GTP-binding protein
ric2 - rice gi|218228|dbj|BAA02904.1| ras-related GTP
binding protein [Oryza sativa]
Length = 217
Score = 310 bits (795), Expect = 2e-83
Identities = 158/215 (73%), Positives = 181/215 (83%), Gaps = 1/215 (0%)
Frame = +3
Query: 69 HKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIK 248
++ +DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+QVDGK +K
Sbjct: 5 YREEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVK 64
Query: 249 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIML 428
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENVERWLKELRDH D NIV+ML
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVML 124
Query: 429 VGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVL 608
VGNKSDL+HL VQT+ +AF ERE L F+ETSALESTNVE AF ++LT+IY IVSK+ +
Sbjct: 125 VGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSV 184
Query: 609 DSEDNRPK-IGEGRDVIVIDNAHDDGGKKKGGCCS 710
++ D+ G+G + + D D KKGGCCS
Sbjct: 185 EAGDDAGSGPGKGEKINIKD---DVSAVKKGGCCS 216
>gb|AAK15703.1| GTP-binding protein [Oryza sativa]
Length = 217
Score = 310 bits (795), Expect = 2e-83
Identities = 158/215 (73%), Positives = 181/215 (83%), Gaps = 1/215 (0%)
Frame = +3
Query: 69 HKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIK 248
++ +DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+QVDGK +K
Sbjct: 5 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVK 64
Query: 249 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIML 428
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENVERWLKELRDH D NIV+ML
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVML 124
Query: 429 VGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVL 608
VGNKSDL+HL VQT+ +AF ERE L F+ETSALESTNVE AF ++LT+IY IVSK+ +
Sbjct: 125 VGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSV 184
Query: 609 DSEDNRPK-IGEGRDVIVIDNAHDDGGKKKGGCCS 710
++ D+ G+G + + D D KKGGCCS
Sbjct: 185 EAGDDAGSGPGKGEKINIKD---DVSAVKKGGCCS 216
>sp|Q40193|R11C_LOTJA Ras-related protein Rab11C gi|1370146|emb|CAA98179.1| RAB11C [Lotus
corniculatus var. japonicus]
Length = 216
Score = 310 bits (794), Expect = 2e-83
Identities = 157/219 (71%), Positives = 180/219 (81%), Gaps = 3/219 (1%)
Frame = +3
Query: 63 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 242
M+H+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 243 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVI 422
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TF+NV+RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 423 MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKK 602
M+ GNKSDL HLR V + A E+EGLSF+ETSALE+TN+EKAFQ ILTEIYHIVSKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 603 VLDSED---NRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 710
L +++ G+G + N D G K GCCS
Sbjct: 181 ALAAQEATAGASVPGQGTTI----NVADTSGNTKKGCCS 215
