Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001050A_C01 KCC001050A_c01
(540 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK98736.1|AC090485_15 Putative cyclin-dependent kinase regul... 139 2e-32
ref|NP_180363.1| CDK-subunit 1 [Arabidopsis thaliana] gi|2528771... 138 5e-32
ref|NP_180364.1| CDK-subunit 2 [Arabidopsis thaliana] gi|2528771... 134 6e-31
gb|AAO13226.1|AF149014_1 CKS1 protein [Populus tremula x Populus... 133 2e-30
sp|P55933|CKS1_PHYPO PROBABLE CYCLIN-DEPENDENT KINASES REGULATOR... 125 4e-28
>gb|AAK98736.1|AC090485_15 Putative cyclin-dependent kinase regulatory subunit [Oryza sativa]
Length = 90
Score = 139 bits (351), Expect = 2e-32
Identities = 64/83 (77%), Positives = 69/83 (83%)
Frame = +1
Query: 235 IQYSEKYYDDVYEYRHVVLPPEIAQLLPKGRLLSENEWRALGVQQSRGWVHYAIHRPEPH 414
IQYSEKY+DD YEYRHVVLPPE+A+LLPK RLLSENEWRA+GVQQSRGWVHYAIHRPEPH
Sbjct: 4 IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 63
Query: 415 IMLFRRPKGYGTNPVAPEALQVQ 483
IMLFRRP + A A Q
Sbjct: 64 IMLFRRPLNFQQQQEAAAAAAAQ 86
>ref|NP_180363.1| CDK-subunit 1 [Arabidopsis thaliana] gi|25287718|pir||A84679
hypothetical protein At2g27960 [imported] - Arabidopsis
thaliana gi|2274859|emb|CAA03859.1| Cks1 protein
[Arabidopsis thaliana] gi|4510420|gb|AAD21506.1|
putative cyclin-dependent kinase regulatory subunit
[Arabidopsis thaliana] gi|21593913|gb|AAM65878.1|
putative cyclin-dependent kinase regulatory subunit
[Arabidopsis thaliana]
Length = 87
Score = 138 bits (347), Expect = 5e-32
Identities = 60/70 (85%), Positives = 66/70 (93%)
Frame = +1
Query: 235 IQYSEKYYDDVYEYRHVVLPPEIAQLLPKGRLLSENEWRALGVQQSRGWVHYAIHRPEPH 414
IQYSEKY+DD +EYRHVVLPPE+A+LLPK RLLSENEWRA+GVQQSRGWVHYA+HRPEPH
Sbjct: 4 IQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRPEPH 63
Query: 415 IMLFRRPKGY 444
IMLFRRP Y
Sbjct: 64 IMLFRRPLNY 73
>ref|NP_180364.1| CDK-subunit 2 [Arabidopsis thaliana] gi|25287719|pir||B84679
hypothetical protein At2g27970 [imported] - Arabidopsis
thaliana gi|4510419|gb|AAD21505.1| putative
cyclin-dependent kinase regulatory subunit [Arabidopsis
thaliana]
Length = 83
Score = 134 bits (338), Expect = 6e-31
Identities = 58/70 (82%), Positives = 66/70 (93%)
Frame = +1
Query: 235 IQYSEKYYDDVYEYRHVVLPPEIAQLLPKGRLLSENEWRALGVQQSRGWVHYAIHRPEPH 414
IQYS+KY+DD +EYRHVVLPPE+A+LLPK R+LSE+EWRA+GVQQSRGWVHYAIHRPEPH
Sbjct: 4 IQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRPEPH 63
Query: 415 IMLFRRPKGY 444
IMLFRRP Y
Sbjct: 64 IMLFRRPLNY 73
>gb|AAO13226.1|AF149014_1 CKS1 protein [Populus tremula x Populus tremuloides]
Length = 83
Score = 133 bits (334), Expect = 2e-30
Identities = 60/70 (85%), Positives = 64/70 (90%)
Frame = +1
Query: 235 IQYSEKYYDDVYEYRHVVLPPEIAQLLPKGRLLSENEWRALGVQQSRGWVHYAIHRPEPH 414
IQYSEKY DD +EYRHVVLPPE+A+LL K RLLSENEWRA+GVQQSRGWVHYAIHRPEPH
Sbjct: 4 IQYSEKYLDDTFEYRHVVLPPEVAKLLIKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 63
Query: 415 IMLFRRPKGY 444
IMLFRRP Y
Sbjct: 64 IMLFRRPLNY 73
>sp|P55933|CKS1_PHYPO PROBABLE CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT
gi|2130178|pir||S65484 cell division control protein
cksphy - slime mold (Physarum polycephalum)
Length = 84
Score = 125 bits (314), Expect = 4e-28
Identities = 53/71 (74%), Positives = 64/71 (89%)
Frame = +1
Query: 220 MAQNNIQYSEKYYDDVYEYRHVVLPPEIAQLLPKGRLLSENEWRALGVQQSRGWVHYAIH 399
M ++ IQYSEKYYDD +EYRHV+LPP++A+ +PK RLLSE EWR LGVQQS+GWVHYA+H
Sbjct: 1 MPRDTIQYSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALH 60
Query: 400 RPEPHIMLFRR 432
RPEPHI+LFRR
Sbjct: 61 RPEPHILLFRR 71
