KCC001039A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001039A_C01 KCC001039A_c01
tctgttgctgccttgTGTTGACACCGCGGACCCTTCTTATTTATAGTCGAAGAAACCGCC
TCTGTAAATATCTGAACCATGCTGACCAAGCGCCTTCCAGCTGCGGCGGGTCTTCGCTCC
TCGCTCCGCCGTAACGCGGTGGTCGTGCGTGCATCTTCAGTGGATGTCACGTTTAAGATT
CACCGGCATGTTGAGTATGGTCAGAGCTTGCTGCTGGTCGGTGGCCCCGCCGAACTTGGG
AACTGGGACGGCACGAAGGCCGTGCCGCTGGAGTGGTCTGAGGGCGACAACTGGACAGCC
AAGGTCTCGCTGCCTGCCGGTGCGTCTGCGGAGTACAAATACATCATCAAGCGCAAGGAC
AGCCTGGATTGGTGCCCGGGGCAGAACAAGGCGGTCGCGCTGCCTGCAGCGGTGGCCGTC
GAGGTCAGCGACTCGTGGGAGCACTCGACCAACACCATGGCCGTGACCGTGCCGGCTGAA
GCTGCCGCCGCACCGGCGCCCATGGCGCCGATTGTTGCCGAGGTGCCCGCGCCCGCTCCT
GAGGCACCAATGGTGGCGGAGGCCCTGGCGCCCGCTCCCGCGACGCCGATCGTGGTGGCC
GAGGCACCTGTCCCCGTGCACTATCACGAGATTTCGGCGGAGGCGGTGGAGCGCGCCGAA
CACCGAGCTGTTGCGGTGAGCACCGTCGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001039A_C01 KCC001039A_c01
         (690 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB42581.1| putative degreening-enhanced protein [Auxenochlo...    69  7e-11
dbj|BAB63700.1| P0683F02.3 [Oryza sativa (japonica cultivar-grou...    68  1e-10
ref|ZP_00017646.1| hypothetical protein [Chloroflexus aurantiacus]     68  1e-10
sp|P17692|CDGT_BACS8 Cyclomaltodextrin glucanotransferase precur...    67  3e-10
dbj|BAA08436.1| glucoamylase G2 [Corticium rolfsii]                    66  6e-10

>emb|CAB42581.1| putative degreening-enhanced protein [Auxenochlorella
           protothecoides]
          Length = 214

 Score = 68.9 bits (167), Expect = 7e-11
 Identities = 44/153 (28%), Positives = 70/153 (44%), Gaps = 14/153 (9%)
 Frame = +1

Query: 151 ASSVDVTFKIHRHVEYGQSLLLVGGPAELGNWDGTKAVPLEWSEGDNWTAKVSLPAGASA 330
           A    V F++ + V +GQ++ +V        W+    + ++WSEGD W     +  G   
Sbjct: 19  AGKAKVQFRLPKRVSFGQTISIV---TSRSGWEPIPDLHMDWSEGDEWKVSAEVAPGDEL 75

Query: 331 EYKYIIKRKDSL-DWCPGQNK--AVALPAAVAVEVSDSWEHSTNTMAVTVP-AEAAAAPA 498
           EYKY++     + +W  G N+  AV +P   AV V D W   T  ++V +P A  A +P 
Sbjct: 76  EYKYVVLGPSGIVEWQTGSNRRLAVDVPGGAAVTVVDEWHGPTQQVSVELPEALQATSPL 135

Query: 499 ----------PMAPIVAEVPAPAPEAPMVAEAL 567
                     P+A   + V  PA  A ++A  L
Sbjct: 136 MTRRQSPSVHPLASSASTVCPPACSAALLAHRL 168

>dbj|BAB63700.1| P0683F02.3 [Oryza sativa (japonica cultivar-group)]
           gi|21743328|dbj|BAC03322.1| OJ1402_H07.11 [Oryza sativa
           (japonica cultivar-group)]
          Length = 379

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 35/105 (33%), Positives = 57/105 (53%), Gaps = 2/105 (1%)
 Frame = +1

Query: 145 VRASSVDVTFKIHRHVEYGQSLLLVGGPAELGNWDGTKAVPLEWSEGDNWTAKVSLPAGA 324
           V   +V V F + +   +GQ  L+VG  A LG W+  KA  L+WSE   WT K  LPA  
Sbjct: 117 VPTKTVHVKFVLQKRCAFGQRFLVVGDVAALGLWNPAKAAALDWSEDHVWTVKKELPAER 176

Query: 325 SAEYKYIIK-RKDSLDWCPGQNKAV-ALPAAVAVEVSDSWEHSTN 453
           S E+K++++ R   ++W  G+N+ +     +  + V + W+ + N
Sbjct: 177 SIEFKFLLQDRSGHVEWQHGRNRILHVADTSNTLIVCEDWDEAKN 221

>ref|ZP_00017646.1| hypothetical protein [Chloroflexus aurantiacus]
          Length = 575

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 35/129 (27%), Positives = 71/129 (54%)
 Frame = +1

Query: 52  ETASVNI*TMLTKRLPAAAGLRSSLRRNAVVVRASSVDVTFKIHRHVEYGQSLLLVGGPA 231
           +T +V+    +T  +P  + L   +    +  + ++V VTF ++    +GQ++ +VG   
Sbjct: 446 QTVTVDSNRRITVSIPPFSALAIHVGAK-LSTQPATVAVTFNVNATTYWGQNVFVVGNIP 504

Query: 232 ELGNWDGTKAVPLEWSEGDNWTAKVSLPAGASAEYKYIIKRKDSLDWCPGQNKAVALPAA 411
           +LGNW+  +AVPL  +    W+  V+LPA  + EYKYI +   ++ W    N+ +  P +
Sbjct: 505 QLGNWNPAQAVPLSAATYPVWSGTVNLPANTTIEYKYIKRDGSNVVWECCNNRVITTPGS 564

Query: 412 VAVEVSDSW 438
            ++ ++++W
Sbjct: 565 GSMTLNETW 573

>sp|P17692|CDGT_BACS8 Cyclomaltodextrin glucanotransferase precursor
           (Cyclodextrin-glycosyltransferase) (CGTase)
           (Raw-starch-digesting amylase) gi|98164|pir||S09196
           cyclomaltodextrin glucanotransferase (EC 2.4.1.19)
           precursor - Bacillus sp. (strain B1018)
           gi|142509|gb|AAA22239.1| raw-starch-digesting amylase
           precursor gi|216325|dbj|BAA14140.1| raw-starch-digesting
           amylase precursor [Bacillus sp. B1018]
          Length = 713

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
 Frame = +1

Query: 103 AAGLRSSLRRNAVVVRASSVDVTFKIHRHVE-YGQSLLLVGGPAELGNWDGTKAVPLEWS 279
           AAG  S++  N  V+    V V F ++      GQ+L L G  +ELGNWD  KA+   ++
Sbjct: 595 AAGTASNVYDNFEVLSGDQVSVRFVVNNATTALGQNLYLTGNVSELGNWDPAKAIGPMYN 654

Query: 280 EG----DNWTAKVSLPAGASAEYKYIIKRKDSLDWCPGQNKAVALPAAVAVEVSDSWE 441
           +      NW   VS+PAG + E+K++ K+  ++ W  G N     P++    ++ +W+
Sbjct: 655 QVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTVTWEGGSNHTFTAPSSGTATINVNWQ 712

>dbj|BAA08436.1| glucoamylase G2 [Corticium rolfsii]
          Length = 579

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +1

Query: 151 ASSVDVTFKIHRHVEYGQSLLLVGGPAELGNWDGTKAVPLEWSEGDNWTAKVSLPAGASA 330
           + SV+VTF ++    YGQ++ + G  +ELGNW     V L  +    W+A ++LPA  + 
Sbjct: 480 SGSVEVTFDVYATTVYGQNIYITGDVSELGNWTPANGVALSSANYPTWSATIALPADTTI 539

Query: 331 EYKYIIKRKDSLDWCPG-QNKAVALPAAVAVEVSDSWEHS 447
           +YKY+     ++ W     N+ +  PA+      D+W+ S
Sbjct: 540 QYKYVNIDGSTVIWEDAISNREITTPASGTYTEKDTWDES 579



EST assemble image


clone accession position
1 LCL076a11_r AV630247 1 445
2 MX019h06_r BP086906 16 341
3 CM012b09_r AV387136 17 491
4 HCL056d12_r AV642708 25 521
5 LC029g11_r AV621004 71 524
6 MXL016e08_r BP093981 243 690




Chlamydomonas reinhardtii
Kazusa DNA Research Institute