Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001027A_C01 KCC001027A_c01
(596 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A43932 mucin 2 precursor, intestinal - human (fragments) 37 0.16
ref|ZP_00024648.1| COG0513: Superfamily II DNA and RNA helicases... 34 1.8
ref|NP_625615.1| putative fatty acid CoA ligase [Streptomyces co... 33 2.3
ref|XP_292761.2| similar to Potential phospholipid-transporting ... 33 4.0
gb|AAB86406.1| homeobox protein Nkx2.6 [Mus musculus] 33 4.0
>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
Length = 3020
Score = 37.4 bits (85), Expect = 0.16
Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 1/162 (0%)
Frame = +2
Query: 83 TLAQLLCRNCISSYLATRTNVTPPPLMLSYALAPAYLNASQVQGVKLIAHLMPSLPPHNR 262
T+ N + + T T VTP P S +P L A + + P+ P
Sbjct: 1884 TMTTTTTENPTPTPITTTTTVTPTPTPTS-TQSPNGLQAPTPTPISTTTTVTPT-PTPTG 1941
Query: 263 TRDPTSDVCHFVCGCTL*MPAPQPCATA*LHTLLIAAAATGGPAPAPAQSIATARTALQH 442
T+ PT+ + T P P P T T+LI T P P P + +T T +
Sbjct: 1942 TQTPTTTP---ITTTTTVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITT 1998
Query: 443 SCCFSQ*RQLLAS-TQQL*PITTFWPSVKRYPAPQVDGAGPP 565
+ + + T + PI+T +V P P GPP
Sbjct: 1999 TTTVTATPTPTGTQTPTMIPIST-TTTVTPTPTPTTGSTGPP 2039
>ref|ZP_00024648.1| COG0513: Superfamily II DNA and RNA helicases [Ralstonia
metallidurans]
Length = 654
Score = 33.9 bits (76), Expect = 1.8
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +1
Query: 349 AAHATDRRSGHRWACTGSRSVHSYGPHCSAAFLLLQPVAPAP 474
A H TDR++G R AC+G RS GP PV PAP
Sbjct: 6 ARHPTDRQAGCRRACSGVRSTPRPGPRA-------PPVPPAP 40
>ref|NP_625615.1| putative fatty acid CoA ligase [Streptomyces coelicolor A3(2)]
gi|8977920|emb|CAB95787.1| putative fatty acid CoA
ligase [Streptomyces coelicolor A3(2)]
Length = 360
Score = 33.5 bits (75), Expect = 2.3
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 158 LMLSYALAPAYLNASQVQGVKLIAHLMPSLPPHNRTRDPTSDVCHFVCGCTL*MPAP 328
L S A A Y A + V ++P + RTR PT D CH CG L AP
Sbjct: 170 LPCSLAFAVLYFGALRTGAV--------AVPVYPRTRTPTVDPCHEACGARLVFTAP 218
>ref|XP_292761.2| similar to Potential phospholipid-transporting ATPase IB (ML-1)
[Homo sapiens]
Length = 424
Score = 32.7 bits (73), Expect = 4.0
Identities = 23/69 (33%), Positives = 29/69 (41%), Gaps = 1/69 (1%)
Frame = +1
Query: 385 WACTGSRSVHSYGPHCSAAFLLLQPVAPAPRQYAAA-LADHHLLALSEAVSGTSG*WGGP 561
WA S + A F L+P+ PR Y A + H LL+ S G WGGP
Sbjct: 41 WAHQEVGSAETRALTTGARFGFLRPLPAGPRPYRAWWVLPHLLLSPQRGCSFAQGLWGGP 100
Query: 562 S**RRDVYG 588
R+V G
Sbjct: 101 GHPEREVAG 109
>gb|AAB86406.1| homeobox protein Nkx2.6 [Mus musculus]
Length = 260
Score = 32.7 bits (73), Expect = 4.0
Identities = 25/76 (32%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
Frame = +2
Query: 203 QVQGVKLIAHLMPSLPPHNRTRD------PTSDVCHFVCGCTL*MPAPQPCATA*LHTLL 364
Q Q ++L H + P + + P SDV F+ P P AT L T L
Sbjct: 121 QDQNLELAGHPLAPRPGSSASTGTGRQPLPGSDVAAFLVPTKPPRPIPASVATRALPTTL 180
Query: 365 IAAAATGGPAPAPAQS 412
AA PAPAP +S
Sbjct: 181 AMRAAAPAPAPAPGRS 196
