KCC001024A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001024A_C01 KCC001024A_c01
ggacagcagctttgacctggtcatctcaaactgcgtgatcaacctgtcgcccgacaaggc
gcgtgtgctgtccgagtgctACCGCGTGCTTGCCCCCGGCGGCGAGATGCACTTCAGCGA
CGTCTACGTCGACAGGCGACTGCCGCAGTCGGTGCGCTCCCACCCGGTGCTGCTGGGCGA
GTGCCTGGCGGGCGCCCTGTACAACAACGACTTCATCCGCCTGTGCCGCAAGGTGGGCTT
CACGGATCCTCGCCAGCTGGAGTGCGAGGAGATCCAGATCCATGACGCCGAGCTGCGGGA
CCAAGTGGGGGAGGCGCGCTTCTACAGCATCACCTACAGGCTGTTCAAGGTGCCGGGCCA
GATTGAGGACCTGTGTGAGGACTACGGACAGGTGGCTGTGTACAAGGGCACCATCCCCGG
CCACTCGCACGCCTATGACCTGGACGACCACCACAGGTTCGTGACCAACAAGCCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001024A_C01 KCC001024A_c01
         (475 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_627656.1| putative methyltransferase [Streptomyces coelic...   192  2e-48
ref|ZP_00067221.1| COG0500: SAM-dependent methyltransferases [Mi...   164  4e-40
gb|AAH13468.1| methyltransferase Cyt19 [Mus musculus]                 134  4e-31
ref|NP_065602.1| methyltransferase Cyt19 [Mus musculus] gi|11360...   132  3e-30
ref|NP_543166.1| methyltransferase Cyt19 [Rattus norvegicus] gi|...   127  5e-29

>ref|NP_627656.1| putative methyltransferase [Streptomyces coelicolor A3(2)]
           gi|6491814|emb|CAB61860.1| putative methyltransferase
           [Streptomyces coelicolor A3(2)]
          Length = 359

 Score =  192 bits (488), Expect = 2e-48
 Identities = 94/158 (59%), Positives = 114/158 (71%)
 Frame = +2

Query: 2   DSSFDLVISNCVINLSPDKARVLSECYRVLAPGGEMHFSDVYVDRRLPQSVRSHPVLLGE 181
           D+S D+V+SNCV+NLSPDK RVLSE +RVL PGGE++FSD++ DRRLP S+   PVL+GE
Sbjct: 151 DASVDVVVSNCVVNLSPDKPRVLSEIFRVLKPGGELYFSDIFSDRRLPASLLDDPVLVGE 210

Query: 182 CLAGALYNNDFIRLCRKVGFTDPRQLECEEIQIHDAELRDQVGEARFYSITYRLFKVPGQ 361
           CLAGALY  DF R   +VG  D R L    + I D ++  ++G A F S T R FK+P  
Sbjct: 211 CLAGALYTEDFRRALERVGCPDARTLAASPVTISDPDIEVKIGFATFTSRTIRAFKLP-- 268

Query: 362 IEDLCEDYGQVAVYKGTIPGHSHAYDLDDHHRFVTNKP 475
           +ED CEDYGQVAVY GTI  H HA+DLDDHHR  T KP
Sbjct: 269 LEDRCEDYGQVAVYHGTIAEHPHAFDLDDHHRLHTGKP 306

>ref|ZP_00067221.1| COG0500: SAM-dependent methyltransferases [Microbulbifer degradans
           2-40]
          Length = 346

 Score =  164 bits (416), Expect = 4e-40
 Identities = 77/150 (51%), Positives = 99/150 (65%)
 Frame = +2

Query: 5   SSFDLVISNCVINLSPDKARVLSECYRVLAPGGEMHFSDVYVDRRLPQSVRSHPVLLGEC 184
           +SFD++ISNCVINL  DK  VL   + +L  GGE +FSDVY DRR+P ++   P+L GEC
Sbjct: 138 NSFDVIISNCVINLCTDKTAVLKHAWHLLKEGGEFYFSDVYADRRIPTNLSQDPILYGEC 197

Query: 185 LAGALYNNDFIRLCRKVGFTDPRQLECEEIQIHDAELRDQVGEARFYSITYRLFKVPGQI 364
           L+GA Y NDFI   +  GF DPR +E   I I + +L  +VG  +FYS TYRLFK+ G +
Sbjct: 198 LSGAYYWNDFINAAKTAGFIDPRLVESSPITIENEQLEQRVGNIKFYSATYRLFKLAG-L 256

Query: 365 EDLCEDYGQVAVYKGTIPGHSHAYDLDDHH 454
           E  CEDYGQ  +Y G I  H  ++ LD HH
Sbjct: 257 EPACEDYGQAVIYNGGIAHHPDSFSLDGHH 286

>gb|AAH13468.1| methyltransferase Cyt19 [Mus musculus]
          Length = 376

 Score =  134 bits (338), Expect = 4e-31
 Identities = 70/152 (46%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
 Frame = +2

Query: 8   SFDLVISNCVINLSPDKARVLSECYRVLAPGGEMHFSDVYVDRRLPQSVRSHPVLLGECL 187
           S+D+VISNCVINL PDK +VL E YRVL  GGE++FSDVY    +P+ ++SH VL GECL
Sbjct: 149 SYDIVISNCVINLVPDKQQVLQEVYRVLKHGGELYFSDVYASLEVPEDIKSHKVLWGECL 208

Query: 188 AGALYNNDFIRLCRKVGFTDPRQLECEEIQIHDAELRDQVGEARFYSITYRLFKVP-GQI 364
            GALY  D   + +K+GF  PR +  + I + + EL   +G+ RF S T+RLFK+P  + 
Sbjct: 209 GGALYWKDLAIIAQKIGFCPPRLVTADIITVENKELEGVLGDCRFVSATFRLFKLPKTEP 268

Query: 365 EDLCEDYGQVAVYKGTIPGHSHAYDLDDHHRF 460
            + C       VY G I GH      D +  F
Sbjct: 269 AERCR-----VVYNGGIKGHEKELIFDANFTF 295

>ref|NP_065602.1| methyltransferase Cyt19 [Mus musculus] gi|11360368|pir||T44795
           methyltransferase [imported] - mouse
           gi|6006813|gb|AAF00618.1|AF166383_1 methyltransferase
           [Mus musculus]
          Length = 336

 Score =  132 bits (331), Expect = 3e-30
 Identities = 69/152 (45%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
 Frame = +2

Query: 8   SFDLVISNCVINLSPDKARVLSECYRVLAPGGEMHFSDVYVDRRLPQSVRSHPVLLGECL 187
           S+ +VISNCVINL PDK +VL E YRVL  GGE++FSDVY    +P+ ++SH VL GECL
Sbjct: 149 SYGIVISNCVINLVPDKQQVLQEVYRVLKHGGELYFSDVYASLEVPEDIKSHKVLWGECL 208

Query: 188 AGALYNNDFIRLCRKVGFTDPRQLECEEIQIHDAELRDQVGEARFYSITYRLFKVP-GQI 364
            GALY  D   + +K+GF  PR +  + I + + EL   +G+ RF S T+RLFK+P  + 
Sbjct: 209 GGALYWKDLAIIAQKIGFCPPRLVTADIITVENKELEGVLGDCRFVSATFRLFKLPKTEP 268

Query: 365 EDLCEDYGQVAVYKGTIPGHSHAYDLDDHHRF 460
            + C       VY G I GH      D +  F
Sbjct: 269 AERCR-----VVYNGGIKGHEKELIFDANFTF 295

>ref|NP_543166.1| methyltransferase Cyt19 [Rattus norvegicus]
           gi|18150409|gb|AAL61609.1|AF393243_1
           S-adenosylmethionine:arsenic (III) methyltransferase
           [Rattus norvegicus]
          Length = 369

 Score =  127 bits (320), Expect = 5e-29
 Identities = 69/152 (45%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
 Frame = +2

Query: 8   SFDLVISNCVINLSPDKARVLSECYRVLAPGGEMHFSDVYVDRRLPQSVRSHPVLLGECL 187
           S+D+VISNCVINL PDK +VL E Y+VL  GGE++FSDVY    + + ++SH VL GECL
Sbjct: 148 SYDIVISNCVINLVPDKQKVLREVYQVLKYGGELYFSDVYASLEVSEDIKSHKVLWGECL 207

Query: 188 AGALYNNDFIRLCRKVGFTDPRQLECEEIQIHDAELRDQVGEARFYSITYRLFKVPGQIE 367
            GALY  D   + +K+GF  PR +    I + + EL   +G+ RF S T+RLFK+P    
Sbjct: 208 GGALYWKDLAVIAKKIGFCPPRLVTANIITVGNKELERVLGDCRFVSATFRLFKLP---- 263

Query: 368 DLCEDYGQV-AVYKGTIPGHSHAYDLDDHHRF 460
              E  G+   VY G I GH      D +  F
Sbjct: 264 -KTEPAGRCQVVYNGGIMGHEKELIFDANFTF 294



EST assemble image


clone accession position
1 LC083b11_r AV624819 1 475
2 CM010e06_r AV386970 83 396




Chlamydomonas reinhardtii
Kazusa DNA Research Institute