KCC000992A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000992A_C01 KCC000992A_c01
gaacatggggctctatggtgagcgcgcgggggcgctcagcgtcgtgtgcaagagcaagga
ggtggccggccgcgtggagtCGCAGCTGAAGCTGGTGATTCGCCCCATGTACTCCAACCC
GCCCATGCACGGCGCCGCCATCGCCGCCCGCGTCATGGCCGACCCGCGCCTTAACGCCCT
GTGGAAGGAGGAGCTGGCGGGCATGGCCCACCGCATCAAGGCCATGCGCCAGGCGCTGTA
CGGCCAGCTGGTGGCGCGGCAGCTGCCCGGCGACTGGAGCTTCGTGCTCAAGCAGATTGG
CATGTTCAGCTACACGGGCCTGAGCAAGGCTCAGTGCGAGGTGCTGACCCGCAAGTGGCA
CATCCACCTGACCATGGACGGCCGTATCTCCATGGCCGGCCTGTCGGCGGCCTCCTGCCC
CTACCTGGCCGAGGCCATTGCCGACGTGGTCACAAACGGTGGCAGCGCCTAGACACGCCG
CTGCTAGGCGGCTGGGGCTTCATCGCACGGGTGCTGTGAAAGGGTGGATGATGGGGCCGG
CTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000992A_C01 KCC000992A_c01
         (543 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_196713.1| aspartate aminotransferase, chloroplast (transa...   188  5e-47
pir||S65675 aspartate transaminase (EC 2.6.1.1) - proso millet g...   187  6e-47
gb|AAO23563.1| aspartate aminotransferase [Oryza sativa]              186  1e-46
ref|NP_197456.1| aspartate aminotransferase, cytoplasmic isozyme...   185  3e-46
gb|AAA79370.1| aspartate aminotransferase                             185  3e-46

>ref|NP_196713.1| aspartate aminotransferase, chloroplast (transaminase A/Asp3)
           [Arabidopsis thaliana] gi|1168258|sp|P46644|AAT3_ARATH
           Aspartate aminotransferase, chloroplast precursor
           (Transaminase A) gi|11258882|pir||T48511 aspartate
           transaminase (EC 2.6.1.1) Asp3 F15N18.110 [similarity] -
           Arabidopsis thaliana gi|693692|gb|AAA79371.1| aspartate
           aminotransferase gi|7573409|emb|CAB87712.1| aspartate
           aminotransferase (Asp3) [Arabidopsis thaliana]
           gi|15292663|gb|AAK92700.1| putative aspartate
           aminotransferase Asp3 [Arabidopsis thaliana]
           gi|19310621|gb|AAL85041.1| putative aspartate
           aminotransferase ASP3 [Arabidopsis thaliana]
          Length = 449

 Score =  188 bits (477), Expect = 5e-47
 Identities = 93/151 (61%), Positives = 118/151 (77%)
 Frame = +2

Query: 2   NMGLYGERAGALSVVCKSKEVAGRVESQLKLVIRPMYSNPPMHGAAIAARVMADPRLNAL 181
           NMGLYGER GALS+VCKS +VAGRVESQLKLVIRPMYS+PP+HGA+I A ++ D  L   
Sbjct: 296 NMGLYGERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAVILRDKNLFNE 355

Query: 182 WKEELAGMAHRIKAMRQALYGQLVARQLPGDWSFVLKQIGMFSYTGLSKAQCEVLTRKWH 361
           W  EL  MA RI +MR+ L+  L  R  PGDWS ++KQIGMF++TGL+ AQ   +T+++H
Sbjct: 356 WTLELKAMADRIISMRKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLNPAQVSFMTKEYH 415

Query: 362 IHLTMDGRISMAGLSAASCPYLAEAIADVVT 454
           I++T DGRISMAGLS+ + P+LA+AI  VVT
Sbjct: 416 IYMTSDGRISMAGLSSKTVPHLADAIHAVVT 446

>pir||S65675 aspartate transaminase (EC 2.6.1.1) - proso millet
           gi|633095|dbj|BAA08106.1| plastidic aspartate
           aminotransferase [Panicum miliaceum]
          Length = 457

 Score =  187 bits (476), Expect = 6e-47
 Identities = 91/153 (59%), Positives = 115/153 (74%), Gaps = 1/153 (0%)
 Frame = +2

Query: 2   NMGLYGERAGALSVVCKSKEVAGRVESQLKLVIRPMYSNPPMHGAAIAARVMADPRLNAL 181
           N+GLY ER GA++VVC + EVA RV+SQLK + RPMYSNPP+HGA I A ++ DP +   
Sbjct: 303 NLGLYAERIGAINVVCSAPEVADRVKSQLKRLARPMYSNPPIHGARIVANIVGDPTMFGE 362

Query: 182 WKEELAGMAHRIKAMRQALYGQLVARQLPG-DWSFVLKQIGMFSYTGLSKAQCEVLTRKW 358
           WK+E+  MA RIK +RQ LY  L A+   G DWSF+L+QIGMFSYTGL+KAQ + +T KW
Sbjct: 363 WKQEMEQMAGRIKNVRQKLYDSLSAKDKSGKDWSFILRQIGMFSYTGLNKAQSDNMTDKW 422

Query: 359 HIHLTMDGRISMAGLSAASCPYLAEAIADVVTN 457
           H+++T DGRIS+AGLS A C YLA+AI D   N
Sbjct: 423 HVYMTKDGRISLAGLSLAKCDYLADAIIDSFHN 455

>gb|AAO23563.1| aspartate aminotransferase [Oryza sativa]
          Length = 414

 Score =  186 bits (473), Expect = 1e-46
 Identities = 92/153 (60%), Positives = 114/153 (74%), Gaps = 1/153 (0%)
 Frame = +2

Query: 2   NMGLYGERAGALSVVCKSKEVAGRVESQLKLVIRPMYSNPPMHGAAIAARVMADPRLNAL 181
           N+GLY ER GA++VVC + EVA RV+SQLK + RPMYSNPP+HGA I A V+ DP +   
Sbjct: 260 NLGLYAERIGAINVVCSTPEVANRVKSQLKRLARPMYSNPPIHGARIVANVVGDPTMFGE 319

Query: 182 WKEELAGMAHRIKAMRQALYGQLVARQLPG-DWSFVLKQIGMFSYTGLSKAQCEVLTRKW 358
           WK+E+  MA RIK +RQ LY  L A+   G DWSF+L+QIGMFSYTGL+K Q + +T KW
Sbjct: 320 WKQEMEEMAGRIKNVRQKLYDSLSAKDDSGKDWSFILRQIGMFSYTGLNKTQSDNMTDKW 379

Query: 359 HIHLTMDGRISMAGLSAASCPYLAEAIADVVTN 457
           HI++T DGRIS+AGLS A C YLA+AI D   N
Sbjct: 380 HIYMTKDGRISLAGLSLAKCEYLADAIIDSFHN 412

>ref|NP_197456.1| aspartate aminotransferase, cytoplasmic isozyme 1 (transaminase
           A/Asp2) [Arabidopsis thaliana]
           gi|21542386|sp|P46645|AAT2_ARATH Aspartate
           aminotransferase, cytoplasmic isozyme 1 (Transaminase A)
          Length = 405

 Score =  185 bits (470), Expect = 3e-46
 Identities = 89/154 (57%), Positives = 119/154 (76%)
 Frame = +2

Query: 2   NMGLYGERAGALSVVCKSKEVAGRVESQLKLVIRPMYSNPPMHGAAIAARVMADPRLNAL 181
           NMGLYGER GALS+VCKS +VA +VESQ+KLV+RPMYS+PP+HGA+I A ++    +   
Sbjct: 252 NMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVATILKSSDMYNN 311

Query: 182 WKEELAGMAHRIKAMRQALYGQLVARQLPGDWSFVLKQIGMFSYTGLSKAQCEVLTRKWH 361
           W  EL  MA RIK+MRQ L+  + AR  PGDWS ++KQIGMF++TGL+K Q E +T+++H
Sbjct: 312 WTIELKEMADRIKSMRQQLFEAIQARGTPGDWSHIIKQIGMFTFTGLNKEQVEFMTKEFH 371

Query: 362 IHLTMDGRISMAGLSAASCPYLAEAIADVVTNGG 463
           I++T DGRISMAGLS+ + P+LA+A+   VT  G
Sbjct: 372 IYMTSDGRISMAGLSSKTVPHLADAMHAAVTRLG 405

>gb|AAA79370.1| aspartate aminotransferase
          Length = 405

 Score =  185 bits (470), Expect = 3e-46
 Identities = 89/154 (57%), Positives = 119/154 (76%)
 Frame = +2

Query: 2   NMGLYGERAGALSVVCKSKEVAGRVESQLKLVIRPMYSNPPMHGAAIAARVMADPRLNAL 181
           NMGLYGER GALS+VCKS +VA +VESQ+KLV+RPMYS+PP+HGA+I A ++    +   
Sbjct: 252 NMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVATILKSSDMYNN 311

Query: 182 WKEELAGMAHRIKAMRQALYGQLVARQLPGDWSFVLKQIGMFSYTGLSKAQCEVLTRKWH 361
           W  EL  MA RIK+MRQ L+  + AR  PGDWS ++KQIGMF++TGL+K Q E +T+++H
Sbjct: 312 WTIELKEMADRIKSMRQQLFEAIQARGTPGDWSHIIKQIGMFTFTGLNKEQVEFMTKEFH 371

Query: 362 IHLTMDGRISMAGLSAASCPYLAEAIADVVTNGG 463
           I++T DGRISMAGLS+ + P+LA+A+   VT  G
Sbjct: 372 IYMTSDGRISMAGLSSKTVPHLADAMHAAVTRLG 405



EST assemble image


clone accession position
1 MX053e10_r BP088185 1 436
2 CM008g10_r AV386741 196 543




Chlamydomonas reinhardtii
Kazusa DNA Research Institute